Click here to switch to the map view.

The map label for this gene is phnA [H]

Identifier: 19746202

GI number: 19746202

Start: 1028867

End: 1029202

Strand: Reverse

Name: phnA [H]

Synonym: spyM18_1226

Alternate gene names: 19746202

Gene position: 1029202-1028867 (Counterclockwise)

Preceding gene: 19746203

Following gene: 19746201

Centisome position: 54.31

GC content: 36.9

Gene sequence:

>336_bases
ATGTCATTACCAAATTGTTTGCAATGCCAGTCTGAATATGTTTACGAAGATGGTCTTTTATTAATCTGTCCAATGTGTGC
TTTTGAGTGGACACCAGGTGAGGAAGCGACTGAAGAAGAAGGACTTGTTGTTTTAGATAGCAATGGTGTTCGATTGTCTG
ATGGCGATACTATTACTGTTATTAAAGATTTAAAAGTTAAAGGTGCTCCAAAAGACCTGAAACAAGGGACTCGTGTTAAA
AATATTCGCCTGGTGGAAGGTGATCATAACATTGATTGTAAGATTGATGGGTTTGGCGCGATGAAATTGAAATCAGAATT
TGTCAAGAAAATCTAA

Upstream 100 bases:

>100_bases
ACAAGAAGAATAGTCATCTTCTGATGAGAACGTATTCATCTTGTCAAATCATTGATTCTAAAGTAAAATGGTAACATTAA
GAAATGTTTAGGAGTGTAAG

Downstream 100 bases:

>100_bases
TAATAATACGCAACCAGCTGATCTGGTTGTATTTTTATAAAAAAATCTCTCCCCAAATACGTTCAAATTTGGTATAATAG
TAAAATATTCAGTTTTAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MSLPNCLQCQSEYVYEDGLLLICPMCAFEWTPGEEATEEEGLVVLDSNGVRLSDGDTITVIKDLKVKGAPKDLKQGTRVK
NIRLVEGDHNIDCKIDGFGAMKLKSEFVKKI

Sequences:

>Translated_111_residues
MSLPNCLQCQSEYVYEDGLLLICPMCAFEWTPGEEATEEEGLVVLDSNGVRLSDGDTITVIKDLKVKGAPKDLKQGTRVK
NIRLVEGDHNIDCKIDGFGAMKLKSEFVKKI
>Mature_110_residues
SLPNCLQCQSEYVYEDGLLLICPMCAFEWTPGEEATEEEGLVVLDSNGVRLSDGDTITVIKDLKVKGAPKDLKQGTRVKN
IRLVEGDHNIDCKIDGFGAMKLKSEFVKKI

Specific function: Unknown

COG id: COG2824

COG function: function code P; Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790547, Length=110, Percent_Identity=68.1818181818182, Blast_Score=158, Evalue=8e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004624
- InterPro:   IPR013988
- InterPro:   IPR013987 [H]

Pfam domain/function: PF03831 PhnA; PF08274 PhnA_Zn_Ribbon [H]

EC number: NA

Molecular weight: Translated: 12291; Mature: 12160

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPNCLQCQSEYVYEDGLLLICPMCAFEWTPGEEATEEEGLVVLDSNGVRLSDGDTITV
CCCCCCHHCCCCEEECCCEEEEECCHHEECCCCCCCCCCCCEEEECCCCEEECCCCEEEE
IKDLKVKGAPKDLKQGTRVKNIRLVEGDHNIDCKIDGFGAMKLKSEFVKKI
EEEEEECCCCHHHHCCCEECEEEEEECCCCEEEEECCCCCCHHHHHHHHCC
>Mature Secondary Structure 
SLPNCLQCQSEYVYEDGLLLICPMCAFEWTPGEEATEEEGLVVLDSNGVRLSDGDTITV
CCCCCHHCCCCEEECCCEEEEECCHHEECCCCCCCCCCCCEEEECCCCEEECCCCEEEE
IKDLKVKGAPKDLKQGTRVKNIRLVEGDHNIDCKIDGFGAMKLKSEFVKKI
EEEEEECCCCHHHHCCCEECEEEEEECCCCEEEEECCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12397186; 1322373 [H]