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The map label for this gene is dhaS [H]

Identifier: 19745641

GI number: 19745641

Start: 467292

End: 467828

Strand: Reverse

Name: dhaS [H]

Synonym: spyM18_0584

Alternate gene names: 19745641

Gene position: 467828-467292 (Counterclockwise)

Preceding gene: 19745655

Following gene: 19745640

Centisome position: 24.69

GC content: 36.87

Gene sequence:

>537_bases
ATGGCAACTTCTCTCATCACCAAGAAAAAAATTGCCAAAGCTTTCAAAAAGCAACTAGCAGTGAAAAGCTTTGAAAAAAT
TTCTGTCGTTGATATTATGGATCAGGCCCAAATCAGGCGCCAAACCTTCTACAATCATTTTCTAGATAAGTATGAACTCT
TAGATTGGATTTTTGAGACTGAACTTCAGGAACAGGTCACACACAATCTCAATTACATCAGTGGCTCTCAACTGTTAGAC
GAGTTGCTCTTTTATTTTGAACGCAACAAGACGTTTTATGCCCAACTATTTGATATCAAAGGGCAAAATGATTTTTACAG
CTACTTTGTGGACTACTGTCAGGTCTTAATGGCTAAAATCATTTCTGAATACCAAAGTCAAGAAATGAGCCAATCTGATG
ATGCTGATTACCTTGCTTTTTTAACCCATTATCATGCTAGGGCACTAGCAGATATGATTAAAGGTTATGTTAGTCAGAGT
GAACCTAAACCTTGTCTGACCTATCTCAAGCAGCTTATCTTAACCAGCATTCATTAA

Upstream 100 bases:

>100_bases
CAAAACGTAAGGGACAAATCCTCAGATTTGTCCCTTTTCTTTCTAAAATGCCTTTGATAAGGTATAATGGCAGAAGATAT
TTCATCTTAAAGGATTACTT

Downstream 100 bases:

>100_bases
ACGAGGAAAACGTCATGGTAACCATATTAAATCAAACACAAACACTTATTTCCCAATATATAGCAAGTGTATTAGCAGCC
CATCCCCACCTAGTCCAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MATSLITKKKIAKAFKKQLAVKSFEKISVVDIMDQAQIRRQTFYNHFLDKYELLDWIFETELQEQVTHNLNYISGSQLLD
ELLFYFERNKTFYAQLFDIKGQNDFYSYFVDYCQVLMAKIISEYQSQEMSQSDDADYLAFLTHYHARALADMIKGYVSQS
EPKPCLTYLKQLILTSIH

Sequences:

>Translated_178_residues
MATSLITKKKIAKAFKKQLAVKSFEKISVVDIMDQAQIRRQTFYNHFLDKYELLDWIFETELQEQVTHNLNYISGSQLLD
ELLFYFERNKTFYAQLFDIKGQNDFYSYFVDYCQVLMAKIISEYQSQEMSQSDDADYLAFLTHYHARALADMIKGYVSQS
EPKPCLTYLKQLILTSIH
>Mature_177_residues
ATSLITKKKIAKAFKKQLAVKSFEKISVVDIMDQAQIRRQTFYNHFLDKYELLDWIFETELQEQVTHNLNYISGSQLLDE
LLFYFERNKTFYAQLFDIKGQNDFYSYFVDYCQVLMAKIISEYQSQEMSQSDDADYLAFLTHYHARALADMIKGYVSQSE
PKPCLTYLKQLILTSIH

Specific function: In complex with dhaQ, upon activation by dihydroxyacetone, activates transcription of the dhaKLM operon. Binds the inverted repeat sequence 5'-GGACACATN(6)ATTTGTCC-3' located upstream of and partially overlapping with the -35 promoter sequence of the dhaK

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR012738
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 21040; Mature: 20909

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATSLITKKKIAKAFKKQLAVKSFEKISVVDIMDQAQIRRQTFYNHFLDKYELLDWIFET
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELQEQVTHNLNYISGSQLLDELLFYFERNKTFYAQLFDIKGQNDFYSYFVDYCQVLMAKI
HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
ISEYQSQEMSQSDDADYLAFLTHYHARALADMIKGYVSQSEPKPCLTYLKQLILTSIH
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ATSLITKKKIAKAFKKQLAVKSFEKISVVDIMDQAQIRRQTFYNHFLDKYELLDWIFET
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELQEQVTHNLNYISGSQLLDELLFYFERNKTFYAQLFDIKGQNDFYSYFVDYCQVLMAKI
HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
ISEYQSQEMSQSDDADYLAFLTHYHARALADMIKGYVSQSEPKPCLTYLKQLILTSIH
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]