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The map label for this gene is rgg [H]

Identifier: 19745655

GI number: 19745655

Start: 482726

End: 483577

Strand: Reverse

Name: rgg [H]

Synonym: spyM18_0599

Alternate gene names: 19745655

Gene position: 483577-482726 (Counterclockwise)

Preceding gene: 19745666

Following gene: 19745641

Centisome position: 25.52

GC content: 32.28

Gene sequence:

>852_bases
ATGAAATCAAAACTTGGTGTCACACTTAGAAAAGTTCGAAAAGGAAAGCAAATTAGTCTGTGCTTCGTGGCAGATGAACA
CCTTTCAAAATCACAAATCTCTCGTTTTGAGCGCGGGGAGTCAGAGATATCGTGTATCCGACTGATCAATATTCTAGACA
AATTACACATTACTTTGGATGAGTTCCTTATTTTACATGATGAAGACTATACCAATTCCGAAACATTTGCTAACCTGGTA
CAGTATATTCGTAAGCAATATTCATCACAAAATATCAATAATATAGCATGTTTACTTTCCGACACTTCTGATTACACTCT
GAATTCTTTTGAGAAAACAATGGTAAAGTCCATTTTACACACAATGGATTCAAGCATCATTCCATCAGATGATGAATTAC
TTCAACTAACAGATTATCTCTTTAAAGTTGAAAAATGGGGCTACTATGAAATCCTTTTGTTGGGTAACTGTGTACGAACA
ATTAACTACAACTCCTACTTCCTATTGACAAAGGAGATGTTAAATAATTACATTTACTCTTCACGGAACAAAACTAATAA
ACGAATTGTCACTCAGCTTGCTATAAATTGTTTCATTCTTAGCATCAATAAGGAGGAATTTTCTAATTGCTCCTATTTAA
TTGATGAGATAAAAACCTTGTTAGATAATGAATTAAACTTCTATGAACAGACAGTTTTTCTCTATGCAACAGGTTACTTT
GAATTTAAGCGCCAATTAGAAACTGGAGTTGAAAAGATGAAACAAGCCATACAAGTTCTTGATATTTTAAATGAAGACAA
GTTAAAATTACATTACGCTGACCATTTTGATAAATTAGTTAACAAAGATTAA

Upstream 100 bases:

>100_bases
AATTTTGAAATTTTCTTCATAAGTGGACTTCCTTTCAGTTTTTATTTATTGTACAATAAAAAAAAACGGAATTGATTTTT
GTTGGGAAAGTGGGAAAAAT

Downstream 100 bases:

>100_bases
GTGAAATCATTCTTTATCTTTTAACGAAATACCAATCAAGGGTGTCTCAATAAAAAATCATCTACTCTGACAACTTTTCT
CTTTTACCTATCGACAGCTA

Product: positive regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MKSKLGVTLRKVRKGKQISLCFVADEHLSKSQISRFERGESEISCIRLINILDKLHITLDEFLILHDEDYTNSETFANLV
QYIRKQYSSQNINNIACLLSDTSDYTLNSFEKTMVKSILHTMDSSIIPSDDELLQLTDYLFKVEKWGYYEILLLGNCVRT
INYNSYFLLTKEMLNNYIYSSRNKTNKRIVTQLAINCFILSINKEEFSNCSYLIDEIKTLLDNELNFYEQTVFLYATGYF
EFKRQLETGVEKMKQAIQVLDILNEDKLKLHYADHFDKLVNKD

Sequences:

>Translated_283_residues
MKSKLGVTLRKVRKGKQISLCFVADEHLSKSQISRFERGESEISCIRLINILDKLHITLDEFLILHDEDYTNSETFANLV
QYIRKQYSSQNINNIACLLSDTSDYTLNSFEKTMVKSILHTMDSSIIPSDDELLQLTDYLFKVEKWGYYEILLLGNCVRT
INYNSYFLLTKEMLNNYIYSSRNKTNKRIVTQLAINCFILSINKEEFSNCSYLIDEIKTLLDNELNFYEQTVFLYATGYF
EFKRQLETGVEKMKQAIQVLDILNEDKLKLHYADHFDKLVNKD
>Mature_283_residues
MKSKLGVTLRKVRKGKQISLCFVADEHLSKSQISRFERGESEISCIRLINILDKLHITLDEFLILHDEDYTNSETFANLV
QYIRKQYSSQNINNIACLLSDTSDYTLNSFEKTMVKSILHTMDSSIIPSDDELLQLTDYLFKVEKWGYYEILLLGNCVRT
INYNSYFLLTKEMLNNYIYSSRNKTNKRIVTQLAINCFILSINKEEFSNCSYLIDEIKTLLDNELNFYEQTVFLYATGYF
EFKRQLETGVEKMKQAIQVLDILNEDKLKLHYADHFDKLVNKD

Specific function: Regulates the expression of glucosyltransferase (gtfG) [H]

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982
- InterPro:   IPR010057 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 33235; Mature: 33235

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSKLGVTLRKVRKGKQISLCFVADEHLSKSQISRFERGESEISCIRLINILDKLHITLD
CCCCHHHHHHHHHCCCEEEEEEEECHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
EFLILHDEDYTNSETFANLVQYIRKQYSSQNINNIACLLSDTSDYTLNSFEKTMVKSILH
HEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
TMDSSIIPSDDELLQLTDYLFKVEKWGYYEILLLGNCVRTINYNSYFLLTKEMLNNYIYS
HHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHCCCCCEEEEEHHHHHHHHHC
SRNKTNKRIVTQLAINCFILSINKEEFSNCSYLIDEIKTLLDNELNFYEQTVFLYATGYF
CCCCCHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHHHHHHCCCCHHHHHEEEEEEEHHH
EFKRQLETGVEKMKQAIQVLDILNEDKLKLHYADHFDKLVNKD
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCC
>Mature Secondary Structure
MKSKLGVTLRKVRKGKQISLCFVADEHLSKSQISRFERGESEISCIRLINILDKLHITLD
CCCCHHHHHHHHHCCCEEEEEEEECHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
EFLILHDEDYTNSETFANLVQYIRKQYSSQNINNIACLLSDTSDYTLNSFEKTMVKSILH
HEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
TMDSSIIPSDDELLQLTDYLFKVEKWGYYEILLLGNCVRTINYNSYFLLTKEMLNNYIYS
HHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHCCCCCEEEEEHHHHHHHHHC
SRNKTNKRIVTQLAINCFILSINKEEFSNCSYLIDEIKTLLDNELNFYEQTVFLYATGYF
CCCCCHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHHHHHHCCCCHHHHHEEEEEEEHHH
EFKRQLETGVEKMKQAIQVLDILNEDKLKLHYADHFDKLVNKD
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1534326 [H]