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The map label for this gene is int

Identifier: 19745455

GI number: 19745455

Start: 293882

End: 295078

Strand: Reverse

Name: int

Synonym: spyM18_0336

Alternate gene names: NA

Gene position: 295078-293882 (Counterclockwise)

Preceding gene: 19745456

Following gene: 19745444

Centisome position: 15.57

GC content: 35.42

Gene sequence:

>1197_bases
ATGAAATATAACAAAACAAAATACCCAAATATTTTTTGGTACGAAACGCTAAAAGGTAAACGCTACTATATCCGCCGCAG
TTACTTTTTCCAAGGTAAGAAAAAAGAAATTACCAAAAGCGGACTTAAAACTATTCCTGAAGCCCGTGCTGCCTTAACAG
AAATTGAAAAACAGATTAATGAAAAAAGTATTGGTATCAATATGAATATTACTGTTTCGGGTTATTGGGAGATTTTCCAC
GAGAAACGTGTAGCCACTAAGAGGTGGACACCAAACACTGAAGAGACTTATAAAAGTCTAATGAAAAATAATATACTTAA
AGAGTACGGATCAGTTAAATTACGGAATCTTAATCGTAACGACTATGAGGTTTACATAGCTAATATGCTGATGACAAAAC
CTCGAGAATCCGTTAAGTGTATCAATAATTGTTTCATGGCAATGCTCAATGATGCTGTGCTTAATGGTAATATTCCAGCT
AATCGACTCAAAGGTATTTACGTTGGAGAAAGTACCATTCCTCCCAAAAATAAAAAAGTTACCATGGAACAATTTCAAGA
ATGGTTTATAAAAGCTGAGCAGATGATGGATAAAATCTTTTTCTCACTAACTTATTTAACCATCTTTGGTCTTCGTAGAG
GGGAGATATTTGGAATACGTCAGATGGATATACGTTTTCATCATGATGGTCGTGCTATCCTCAAACTACATGATAGTCGC
AGTAATCACACTAAAAATGGACGACATGGACTTAAAACAAAAGAGTCAGAAAGATATGTCATGTTAGATCTTAAAGGTAC
AGAATTGCTATTGTTTCTGAGAGACAATGCTACTGCTATCAAAAAACGACTTTCCATCATCAAAGACAAAGAATGGGATT
ATATAAGCATTAAGGAAGACGGTAATCTCATTAATCCAAACAAACTCAATGATGAATTTGAGAAAGTTAATGAGAGTGTT
GGTTTTCGTGTCACCCCTCACATGATGCGACACTTTTTTACCACTCAAAGCATAATTGCTGGGGTTCCCATGGAAGCTCT
CAGTAAAGCACTGGGCCACACAAAAATGTATATGACTGATAAATATAATCAGGTACACGATGAACTATCTGTTCAAGTTA
CAGACACATTTTCAGCTTTTTTAGACAATAATATTTCCCGACTGAATTCCCCGACAGAAGGCAAAAAAGCACGGTAA

Upstream 100 bases:

>100_bases
CTTGTTTTCTTATACCTTAAATTATATCACATAAAGGGGGTGATGCCAAGATTCTCTGAAGTTAAGACCTTGTCCAGAAG
CCAAAACTAAGGAGAATAAC

Downstream 100 bases:

>100_bases
AATACGCAGAAAATATTTTGGAAACAAAAAAATACACGCCGTAGAAGCGCATATTTACACACAAATCATTATATCATAAA
TAAAAGATTTTCATGTCACT

Product: integrase

Products: NA

Alternate protein names: Phage Integrase; Tyrosine Recombinase XerC; Phage Integrase Family Protein; Prophage Lp1 Integrase; Site-Specific Recombinase; Tyrosine Recombinase XerC-Like Protein; Integrase Family Protein

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MKYNKTKYPNIFWYETLKGKRYYIRRSYFFQGKKKEITKSGLKTIPEARAALTEIEKQINEKSIGINMNITVSGYWEIFH
EKRVATKRWTPNTEETYKSLMKNNILKEYGSVKLRNLNRNDYEVYIANMLMTKPRESVKCINNCFMAMLNDAVLNGNIPA
NRLKGIYVGESTIPPKNKKVTMEQFQEWFIKAEQMMDKIFFSLTYLTIFGLRRGEIFGIRQMDIRFHHDGRAILKLHDSR
SNHTKNGRHGLKTKESERYVMLDLKGTELLLFLRDNATAIKKRLSIIKDKEWDYISIKEDGNLINPNKLNDEFEKVNESV
GFRVTPHMMRHFFTTQSIIAGVPMEALSKALGHTKMYMTDKYNQVHDELSVQVTDTFSAFLDNNISRLNSPTEGKKAR

Sequences:

>Translated_398_residues
MKYNKTKYPNIFWYETLKGKRYYIRRSYFFQGKKKEITKSGLKTIPEARAALTEIEKQINEKSIGINMNITVSGYWEIFH
EKRVATKRWTPNTEETYKSLMKNNILKEYGSVKLRNLNRNDYEVYIANMLMTKPRESVKCINNCFMAMLNDAVLNGNIPA
NRLKGIYVGESTIPPKNKKVTMEQFQEWFIKAEQMMDKIFFSLTYLTIFGLRRGEIFGIRQMDIRFHHDGRAILKLHDSR
SNHTKNGRHGLKTKESERYVMLDLKGTELLLFLRDNATAIKKRLSIIKDKEWDYISIKEDGNLINPNKLNDEFEKVNESV
GFRVTPHMMRHFFTTQSIIAGVPMEALSKALGHTKMYMTDKYNQVHDELSVQVTDTFSAFLDNNISRLNSPTEGKKAR
>Mature_398_residues
MKYNKTKYPNIFWYETLKGKRYYIRRSYFFQGKKKEITKSGLKTIPEARAALTEIEKQINEKSIGINMNITVSGYWEIFH
EKRVATKRWTPNTEETYKSLMKNNILKEYGSVKLRNLNRNDYEVYIANMLMTKPRESVKCINNCFMAMLNDAVLNGNIPA
NRLKGIYVGESTIPPKNKKVTMEQFQEWFIKAEQMMDKIFFSLTYLTIFGLRRGEIFGIRQMDIRFHHDGRAILKLHDSR
SNHTKNGRHGLKTKESERYVMLDLKGTELLLFLRDNATAIKKRLSIIKDKEWDYISIKEDGNLINPNKLNDEFEKVNESV
GFRVTPHMMRHFFTTQSIIAGVPMEALSKALGHTKMYMTDKYNQVHDELSVQVTDTFSAFLDNNISRLNSPTEGKKAR

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46613; Mature: 46613

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYNKTKYPNIFWYETLKGKRYYIRRSYFFQGKKKEITKSGLKTIPEARAALTEIEKQIN
CCCCCCCCCEEEEEEECCCCEEEEEEHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHC
EKSIGINMNITVSGYWEIFHEKRVATKRWTPNTEETYKSLMKNNILKEYGSVKLRNLNRN
HHHCCEEEEEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCC
DYEVYIANMLMTKPRESVKCINNCFMAMLNDAVLNGNIPANRLKGIYVGESTIPPKNKKV
CEEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCEEEECCCCCCCCCCEE
TMEQFQEWFIKAEQMMDKIFFSLTYLTIFGLRRGEIFGIRQMDIRFHHDGRAILKLHDSR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCEEEEEEECCC
SNHTKNGRHGLKTKESERYVMLDLKGTELLLFLRDNATAIKKRLSIIKDKEWDYISIKED
CCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCHHHHHHHHHHHCCCCCCEEEEECC
GNLINPNKLNDEFEKVNESVGFRVTPHMMRHFFTTQSIIAGVPMEALSKALGHTKMYMTD
CCCCCCCCCCHHHHHHHHHCCCEECHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEC
KYNQVHDELSVQVTDTFSAFLDNNISRLNSPTEGKKAR
CHHHHHHHEEEEEHHHHHHHHCCCHHHCCCCCCCCCCC
>Mature Secondary Structure
MKYNKTKYPNIFWYETLKGKRYYIRRSYFFQGKKKEITKSGLKTIPEARAALTEIEKQIN
CCCCCCCCCEEEEEEECCCCEEEEEEHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHC
EKSIGINMNITVSGYWEIFHEKRVATKRWTPNTEETYKSLMKNNILKEYGSVKLRNLNRN
HHHCCEEEEEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCC
DYEVYIANMLMTKPRESVKCINNCFMAMLNDAVLNGNIPANRLKGIYVGESTIPPKNKKV
CEEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCEEEECCCCCCCCCCEE
TMEQFQEWFIKAEQMMDKIFFSLTYLTIFGLRRGEIFGIRQMDIRFHHDGRAILKLHDSR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCEEEEEEECCC
SNHTKNGRHGLKTKESERYVMLDLKGTELLLFLRDNATAIKKRLSIIKDKEWDYISIKED
CCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCHHHHHHHHHHHCCCCCCEEEEECC
GNLINPNKLNDEFEKVNESVGFRVTPHMMRHFFTTQSIIAGVPMEALSKALGHTKMYMTD
CCCCCCCCCCHHHHHHHHHCCCEECHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEC
KYNQVHDELSVQVTDTFSAFLDNNISRLNSPTEGKKAR
CHHHHHHHEEEEEHHHHHHHHCCCHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA