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The map label for this gene is 33359578

Identifier: 33359578

GI number: 33359578

Start: 1723182

End: 1724060

Strand: Direct

Name: 33359578

Synonym: PF1867

Alternate gene names: NA

Gene position: 1723182-1724060 (Clockwise)

Preceding gene: 18978237

Following gene: 18978240

Centisome position: 90.3

GC content: 40.16

Gene sequence:

>879_bases
GTGAGGGGAATGACGATAGTTGATGTTAGGATTCTTGTTGAAGGAGCAAGTGACGTTGAAGTTGTTAGTAAAGCTTTACA
AGGTTTAGCCCTGGGAAGTGAATATAACATAACCATTTCCTCCATAATTCCGACAACAAACGTAGAGATAGCAAAAAGTG
CAGCCGCAGGGGCCGATTTGTTGATAATAGCAACCGACGCAGATAGAGTGGGCAGAGAACTTGCAGAAAGACTATTCACA
GAGCTTAGTGAGATGGTAGGGCATATAGAGCGGATGAAACTCCCCCTAGGACATGACTTGGAGCATGTAGATGTTGAACT
TGTCAGAAAGGAGTTAAGGAACGCATTAGTTAGGGCAGGTCTAAAAACACTCCAGAGAATTCCAGAATATATGGAGCTCA
GAAGAGACTATCTCGACTTAAAAGGTAAATATGAAGAAATTGAAAAAGAAAAAGAAGACCTATTACAAAAAATCGAAGAA
CTTAAAGCAAAGCTTGAAGAGATAGAGGAAGAATATGCCAGGGTAAAAGAAGAAAATCTTGAATTAAGGGAGCTCCTCAA
AAAAAGAGCCAAAGTTTACAAGCTAGAAGAGAAGTGGAAAGAAATGTTCCCAGGAATAAAGATGCCATCAATTGACATAT
TTAGCAGGGCAATAGAGACACTTGGATTTGCAGGAAAAATAATTGTGGGACAAGGTCATGTGTATGCTGAGGACGACCAC
ATACTCGAACAACTTTTCAAAACAGTCTATCTAAGCCTACAGCTCACACAATCAATTGAAAGGGAGGAAGAGAACATTGA
GGTAATTGAAGGGGAAGAAGAGAAGCTTGAAGAAGAAGTAGAGGTCATTGAGAATGAGGGAGAAAACATTGAGGAGTGA

Upstream 100 bases:

>100_bases
TCGGCATATAAAATATTCAATCCTTATTACTCCCAGTTATTTAGACCCACAATGCTTAATAGTCCGTCAAGAAAATCAAG
TTAAAGAGGGAAAAACCGAG

Downstream 100 bases:

>100_bases
GGTACTAGAGGAATTTGCAACGTATCTTGAGCTAGAAGGAAAGAGCAAGAACACGATTAGAATGTACACATACTTCCTCT
CTAAATTTTTGGAAGAAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Prim Domain Protein; TOPRIM-Domain-Containing Protein Potential Nuclease; Prim-Domain-Containing Protein Potential Nuclease

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MRGMTIVDVRILVEGASDVEVVSKALQGLALGSEYNITISSIIPTTNVEIAKSAAAGADLLIIATDADRVGRELAERLFT
ELSEMVGHIERMKLPLGHDLEHVDVELVRKELRNALVRAGLKTLQRIPEYMELRRDYLDLKGKYEEIEKEKEDLLQKIEE
LKAKLEEIEEEYARVKEENLELRELLKKRAKVYKLEEKWKEMFPGIKMPSIDIFSRAIETLGFAGKIIVGQGHVYAEDDH
ILEQLFKTVYLSLQLTQSIEREEENIEVIEGEEEKLEEEVEVIENEGENIEE

Sequences:

>Translated_292_residues
MRGMTIVDVRILVEGASDVEVVSKALQGLALGSEYNITISSIIPTTNVEIAKSAAAGADLLIIATDADRVGRELAERLFT
ELSEMVGHIERMKLPLGHDLEHVDVELVRKELRNALVRAGLKTLQRIPEYMELRRDYLDLKGKYEEIEKEKEDLLQKIEE
LKAKLEEIEEEYARVKEENLELRELLKKRAKVYKLEEKWKEMFPGIKMPSIDIFSRAIETLGFAGKIIVGQGHVYAEDDH
ILEQLFKTVYLSLQLTQSIEREEENIEVIEGEEEKLEEEVEVIENEGENIEE
>Mature_292_residues
MRGMTIVDVRILVEGASDVEVVSKALQGLALGSEYNITISSIIPTTNVEIAKSAAAGADLLIIATDADRVGRELAERLFT
ELSEMVGHIERMKLPLGHDLEHVDVELVRKELRNALVRAGLKTLQRIPEYMELRRDYLDLKGKYEEIEKEKEDLLQKIEE
LKAKLEEIEEEYARVKEENLELRELLKKRAKVYKLEEKWKEMFPGIKMPSIDIFSRAIETLGFAGKIIVGQGHVYAEDDH
ILEQLFKTVYLSLQLTQSIEREEENIEVIEGEEEKLEEEVEVIENEGENIEE

Specific function: Unknown

COG id: COG4026

COG function: function code R; Uncharacterized protein containing TOPRIM domain, potential nuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33490; Mature: 33490

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGMTIVDVRILVEGASDVEVVSKALQGLALGSEYNITISSIIPTTNVEIAKSAAAGADL
CCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHCCCCCE
LIIATDADRVGRELAERLFTELSEMVGHIERMKLPLGHDLEHVDVELVRKELRNALVRAG
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LKTLQRIPEYMELRRDYLDLKGKYEEIEKEKEDLLQKIEELKAKLEEIEEEYARVKEENL
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ELRELLKKRAKVYKLEEKWKEMFPGIKMPSIDIFSRAIETLGFAGKIIVGQGHVYAEDDH
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCEEECHHH
ILEQLFKTVYLSLQLTQSIEREEENIEVIEGEEEKLEEEVEVIENEGENIEE
HHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRGMTIVDVRILVEGASDVEVVSKALQGLALGSEYNITISSIIPTTNVEIAKSAAAGADL
CCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHCCCCCE
LIIATDADRVGRELAERLFTELSEMVGHIERMKLPLGHDLEHVDVELVRKELRNALVRAG
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LKTLQRIPEYMELRRDYLDLKGKYEEIEKEKEDLLQKIEELKAKLEEIEEEYARVKEENL
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ELRELLKKRAKVYKLEEKWKEMFPGIKMPSIDIFSRAIETLGFAGKIIVGQGHVYAEDDH
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCEEECHHH
ILEQLFKTVYLSLQLTQSIEREEENIEVIEGEEEKLEEEVEVIENEGENIEE
HHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA