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The map label for this gene is 18978414

Identifier: 18978414

GI number: 18978414

Start: 1884068

End: 1884652

Strand: Direct

Name: 18978414

Synonym: PF2042

Alternate gene names: NA

Gene position: 1884068-1884652 (Clockwise)

Preceding gene: 18978410

Following gene: 18978416

Centisome position: 98.73

GC content: 43.08

Gene sequence:

>585_bases
ATGATTAGGAGGGTTAAAAGAGAAATTAGGGTAATCGGATTTGATGACGGAACATTTCCTCACAAAAAAAGAGGAGAAAA
AGTTATTCTCGTCGGAATAGTCATGAAAGGGGGAAGTGATGTTCTTGGAGCTGTTTCTAGGTGGATAACCATAGATGGAC
TTGATGTTACAGAAGCAATAATTGACTCGATTTTGTCTTCAAGATTTAGGGGGGATCTTCGCGTTATCCTACTCAAAGGA
ATAACCTACGCAGGGTTTAACGTCGTTGACGTCAACAGAGTATTTAGGGAGACTGGTCTTCCCCTTATAGTGGTTGTAAG
GAAGAGGCCTGATTTTGAAGCGATTGAAAATGCATTGAGAAAGCATTTCGAAGATTGGGAGAAGAGAATGGAGCTAATAA
AAGCTGGGGGAAAGATCTACGAGCTGATCCCAGGAAAGGTGTACTATCAAGCCATAGGCATTGACGCTGAAACTGCCGCT
AAGATTATAAGAGCAACCTCTCGGAATTCCCTAATTCCAGAGGCCCTGAGGATTGCCCACATAGTTGCATCGGCCGTTAT
GAGGGGAGAAAGCTCCAAAGAATAG

Upstream 100 bases:

>100_bases
ATTATCACTCTTCTTGAGTTTCACTGCAAATATTACCCCTAGCATCTCCACATTTGGGTGGGAAAAGTGTTTTTATACAT
TACTCTCCTTAGGAAAAACA

Downstream 100 bases:

>100_bases
CTACCTCTTTGCTAGAATTGCTCCAGCTATTATAAGGGAAGCACCGAGATATTGGAGTAAAGAAAGTGCCTCTCCAAATA
TAAAGTAAGCTAGGATAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MIRRVKREIRVIGFDDGTFPHKKRGEKVILVGIVMKGGSDVLGAVSRWITIDGLDVTEAIIDSILSSRFRGDLRVILLKG
ITYAGFNVVDVNRVFRETGLPLIVVVRKRPDFEAIENALRKHFEDWEKRMELIKAGGKIYELIPGKVYYQAIGIDAETAA
KIIRATSRNSLIPEALRIAHIVASAVMRGESSKE

Sequences:

>Translated_194_residues
MIRRVKREIRVIGFDDGTFPHKKRGEKVILVGIVMKGGSDVLGAVSRWITIDGLDVTEAIIDSILSSRFRGDLRVILLKG
ITYAGFNVVDVNRVFRETGLPLIVVVRKRPDFEAIENALRKHFEDWEKRMELIKAGGKIYELIPGKVYYQAIGIDAETAA
KIIRATSRNSLIPEALRIAHIVASAVMRGESSKE
>Mature_194_residues
MIRRVKREIRVIGFDDGTFPHKKRGEKVILVGIVMKGGSDVLGAVSRWITIDGLDVTEAIIDSILSSRFRGDLRVILLKG
ITYAGFNVVDVNRVFRETGLPLIVVVRKRPDFEAIENALRKHFEDWEKRMELIKAGGKIYELIPGKVYYQAIGIDAETAA
KIIRATSRNSLIPEALRIAHIVASAVMRGESSKE

Specific function: Unknown

COG id: COG1628

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0215 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2042_PYRFU (Q8TZF3)

Other databases:

- EMBL:   AE009950
- RefSeq:   NP_579771.1
- ProteinModelPortal:   Q8TZF3
- SMR:   Q8TZF3
- EnsemblBacteria:   EBPYRT00000005148
- GeneID:   1469927
- GenomeReviews:   AE009950_GR
- KEGG:   pfu:PF2042
- NMPDR:   fig|186497.1.peg.2097
- GeneTree:   EBGT00050000023355
- HOGENOM:   HBG538942
- OMA:   ECLRISH
- ProtClustDB:   PRK00766
- HAMAP:   MF_00582
- InterPro:   IPR002802
- PIRSF:   PIRSF006380
- ProDom:   PD016744

Pfam domain/function: PF01949 DUF99

EC number: NA

Molecular weight: Translated: 21714; Mature: 21714

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRRVKREIRVIGFDDGTFPHKKRGEKVILVGIVMKGGSDVLGAVSRWITIDGLDVTEAI
CCHHHHHHEEEEECCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHEEECCCCHHHHH
IDSILSSRFRGDLRVILLKGITYAGFNVVDVNRVFRETGLPLIVVVRKRPDFEAIENALR
HHHHHHHHHCCCEEEEEEECCEECCCEEEHHHHHHHHCCCCEEEEEECCCCHHHHHHHHH
KHFEDWEKRMELIKAGGKIYELIPGKVYYQAIGIDAETAAKIIRATSRNSLIPEALRIAH
HHHHHHHHHHHHHHCCCCEEEECCCEEEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHH
IVASAVMRGESSKE
HHHHHHHCCCCCCC
>Mature Secondary Structure
MIRRVKREIRVIGFDDGTFPHKKRGEKVILVGIVMKGGSDVLGAVSRWITIDGLDVTEAI
CCHHHHHHEEEEECCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHEEECCCCHHHHH
IDSILSSRFRGDLRVILLKGITYAGFNVVDVNRVFRETGLPLIVVVRKRPDFEAIENALR
HHHHHHHHHCCCEEEEEEECCEECCCEEEHHHHHHHHCCCCEEEEEECCCCHHHHHHHHH
KHFEDWEKRMELIKAGGKIYELIPGKVYYQAIGIDAETAAKIIRATSRNSLIPEALRIAH
HHHHHHHHHHHHHHCCCCEEEECCCEEEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHH
IVASAVMRGESSKE
HHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA