| Definition | Pyrococcus furiosus DSM 3638, complete genome. |
|---|---|
| Accession | NC_003413 |
| Length | 1,908,256 |
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The map label for this gene is 18978325
Identifier: 18978325
GI number: 18978325
Start: 1804967
End: 1805506
Strand: Direct
Name: 18978325
Synonym: PF1953
Alternate gene names: NA
Gene position: 1804967-1805506 (Clockwise)
Preceding gene: 18978320
Following gene: 18978328
Centisome position: 94.59
GC content: 40.19
Gene sequence:
>540_bases ATGGCTCAGAAGATACTAGTGGAACAAGTTGTCAAAAGAAAAGCCATTGTTGTACAACCCAAGGATACAGTTGATAGGGT TGCAAAAATTCTCTCTAGGAACAAGGCCGGAAGTGCTGTTGTGATGGAAGGAGATGAAATTCTTGGAGTTGTTACTGAGA GAGATATTCTCGACAAAGTCGTTGCCAAAGGAAAGAATCCCAAGGAAGTCAAAGTTGAAGAAATTATGACAAAGAATCCA GTAAAAATCGAGTATGATTACGATATCGAGGATGTCATTGAATTAATGACGGAGAAAGGGGTGAGAAGAGTCCTTGTAAC CAAGTTCGGAAAACCTATTGGATTTGTAACTGCAGCTGATATTCTTGCTGCACTAGCATCTCATAATCATGAGGAAGAAG AGGAAGAGAGGGAGGAGGAATCTGAAGTTTATGGAATATGTGAAGTTTGCGGTCAATATGGAGCACTATACAAGGTTTAT CACGAAGGAAGAGAACTATGGGTTTGCGAGACATGTAAAGACTTAATTGAGGGACGATGA
Upstream 100 bases:
>100_bases TATAACAGGACCTTTTTTCCTCACCCTCTCACCACACTCTCCCTTCACATAATCTTTTTAAATTTCTTTACCTATCACTA AGTGAATAGGAGGGATCATC
Downstream 100 bases:
>100_bases AGAGAAAGCACCTCCACGGATAGATGAAGAAACGCCCACGGACTGAGTCTTCACTCTTTAATTACAATTTCTATCTTTCT TCCCTCTCTGTAACCTTTCA
Product: inosine-5'-monophosphate dehydrogenase related protein II
Products: NA
Alternate protein names: OrfX [H]
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MAQKILVEQVVKRKAIVVQPKDTVDRVAKILSRNKAGSAVVMEGDEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNP VKIEYDYDIEDVIELMTEKGVRRVLVTKFGKPIGFVTAADILAALASHNHEEEEEEREEESEVYGICEVCGQYGALYKVY HEGRELWVCETCKDLIEGR
Sequences:
>Translated_179_residues MAQKILVEQVVKRKAIVVQPKDTVDRVAKILSRNKAGSAVVMEGDEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNP VKIEYDYDIEDVIELMTEKGVRRVLVTKFGKPIGFVTAADILAALASHNHEEEEEEREEESEVYGICEVCGQYGALYKVY HEGRELWVCETCKDLIEGR >Mature_178_residues AQKILVEQVVKRKAIVVQPKDTVDRVAKILSRNKAGSAVVMEGDEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNPV KIEYDYDIEDVIELMTEKGVRRVLVTKFGKPIGFVTAADILAALASHNHEEEEEEREEESEVYGICEVCGQYGALYKVYH EGRELWVCETCKDLIEGR
Specific function: Unknown
COG id: COG0517
COG function: function code R; FOG: CBS domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 [H]
Pfam domain/function: PF00571 CBS [H]
EC number: NA
Molecular weight: Translated: 20193; Mature: 20061
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQKILVEQVVKRKAIVVQPKDTVDRVAKILSRNKAGSAVVMEGDEILGVVTERDILDKV CCHHHHHHHHHHHHCEEECCHHHHHHHHHHHHCCCCCCEEEEECCHHEEHHHHHHHHHHH VAKGKNPKEVKVEEIMTKNPVKIEYDYDIEDVIELMTEKGVRRVLVTKFGKPIGFVTAAD HHCCCCCCHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH ILAALASHNHEEEEEEREEESEVYGICEVCGQYGALYKVYHEGRELWVCETCKDLIEGR HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCC >Mature Secondary Structure AQKILVEQVVKRKAIVVQPKDTVDRVAKILSRNKAGSAVVMEGDEILGVVTERDILDKV CHHHHHHHHHHHHCEEECCHHHHHHHHHHHHCCCCCCEEEEECCHHEEHHHHHHHHHHH VAKGKNPKEVKVEEIMTKNPVKIEYDYDIEDVIELMTEKGVRRVLVTKFGKPIGFVTAAD HHCCCCCCHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH ILAALASHNHEEEEEEREEESEVYGICEVCGQYGALYKVYHEGRELWVCETCKDLIEGR HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11930014; 8522533 [H]