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The map label for this gene is 18978223

Identifier: 18978223

GI number: 18978223

Start: 1708277

End: 1709227

Strand: Reverse

Name: 18978223

Synonym: PF1851

Alternate gene names: NA

Gene position: 1709227-1708277 (Counterclockwise)

Preceding gene: 18978224

Following gene: 18978221

Centisome position: 89.57

GC content: 39.01

Gene sequence:

>951_bases
ATGATGGACAAAGAGCAACTTACGACAGTAGTTGAAAAGATGTTGAATAGTATAGGGTTTAAAACTGCCAGAGTGTCGTT
TAGGGGAGGATGCTTTGACTTAGTTGCTACCAGGCAAATTCTCTTGCTATTTATAAAGACGTTGGTGAATATTGACAAAT
TCACAGAGGAACAAGCTGAGGATTTAAAGAGGTTGGCAAAACTCTTTAGAGCCTCAGCTCTTTTAGTAGGGTTAAGAACT
AAAAACATAGAATTGGAAGATGGAGTTGTTTATGAGAGGTTCGGAATATATGCTGTTAACCCAGAGACCTTGTTTTCCAT
ATTGGCAGGAACTGAATATCCTCTTGTAATGGCTGAGAGGGGAGGATTCTTCGTTAGAATTGATGGGGAGAGGCTAAGAG
AGCTTAGGGAAAAATATGGATACTCTACAACCGAACTTGCAGAAATGCTTGGAGTATCGAGAAAGAGCGTTCAAAGGTAT
GAAAAGGGGGAGGGCATGGTAAGTATAGATGTGGCAATAAGGCTTGAAGAAATCTTCGACGAGCCATTGGTAAAGCCAAT
AGATATATTTAAGGCAAAAATCGAGAAAGTAACATTGTCATCCCCTCCAGAAAATGAATTGGAGAAAGAGGTGTTTGATA
GGTTAGAAAGACTTGGGATGAGTGTTGTAAAAATAAAGAGGGCTCCCTTTAATGCAGTCACAAAAGAGGAAGATGAAGAG
GTTAATCTACTCACTGGAATTGATGAGAAAAAGACCCCCTCGACAATTAGGAGGGTAAGATTAGTTAACCAAATAGCAGA
ATTCGTAGAAAGTGAGGGTGTATTTGTTCTAAATGAAAAGAAAACGGAAGTTGTTGGGAAAGTTCCAATAATTCCTAAAG
ACATTCTCAATAAAGTTAGGGACGTGGATGAGCTAATGGAGATTATTAAAGAGCTAAGGAGTAGCACCTAA

Upstream 100 bases:

>100_bases
CTAAATATCAGACTTTCTTATCCTGTTTCCCTTAGAGACATTTCGAAGAGCGCAACTCAGTGTTAGATAGATTTTATAAA
CTTTTCTTCCTAATCTTTAA

Downstream 100 bases:

>100_bases
ATCTTTATCTTTTTCCATCTTCCTTTTCTAAATACTATCCAGAACAGCCCGGCTGAAATAAATGTTTCAAGGCTCATTCC
TATCCAGGCGGCAATTACTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MMDKEQLTTVVEKMLNSIGFKTARVSFRGGCFDLVATRQILLLFIKTLVNIDKFTEEQAEDLKRLAKLFRASALLVGLRT
KNIELEDGVVYERFGIYAVNPETLFSILAGTEYPLVMAERGGFFVRIDGERLRELREKYGYSTTELAEMLGVSRKSVQRY
EKGEGMVSIDVAIRLEEIFDEPLVKPIDIFKAKIEKVTLSSPPENELEKEVFDRLERLGMSVVKIKRAPFNAVTKEEDEE
VNLLTGIDEKKTPSTIRRVRLVNQIAEFVESEGVFVLNEKKTEVVGKVPIIPKDILNKVRDVDELMEIIKELRSST

Sequences:

>Translated_316_residues
MMDKEQLTTVVEKMLNSIGFKTARVSFRGGCFDLVATRQILLLFIKTLVNIDKFTEEQAEDLKRLAKLFRASALLVGLRT
KNIELEDGVVYERFGIYAVNPETLFSILAGTEYPLVMAERGGFFVRIDGERLRELREKYGYSTTELAEMLGVSRKSVQRY
EKGEGMVSIDVAIRLEEIFDEPLVKPIDIFKAKIEKVTLSSPPENELEKEVFDRLERLGMSVVKIKRAPFNAVTKEEDEE
VNLLTGIDEKKTPSTIRRVRLVNQIAEFVESEGVFVLNEKKTEVVGKVPIIPKDILNKVRDVDELMEIIKELRSST
>Mature_316_residues
MMDKEQLTTVVEKMLNSIGFKTARVSFRGGCFDLVATRQILLLFIKTLVNIDKFTEEQAEDLKRLAKLFRASALLVGLRT
KNIELEDGVVYERFGIYAVNPETLFSILAGTEYPLVMAERGGFFVRIDGERLRELREKYGYSTTELAEMLGVSRKSVQRY
EKGEGMVSIDVAIRLEEIFDEPLVKPIDIFKAKIEKVTLSSPPENELEKEVFDRLERLGMSVVKIKRAPFNAVTKEEDEE
VNLLTGIDEKKTPSTIRRVRLVNQIAEFVESEGVFVLNEKKTEVVGKVPIIPKDILNKVRDVDELMEIIKELRSST

Specific function: Unknown

COG id: COG1395

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR020886
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 36043; Mature: 36043

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDKEQLTTVVEKMLNSIGFKTARVSFRGGCFDLVATRQILLLFIKTLVNIDKFTEEQAE
CCCHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLKRLAKLFRASALLVGLRTKNIELEDGVVYERFGIYAVNPETLFSILAGTEYPLVMAER
HHHHHHHHHHHHHHHHEEEECCEECCCCEEEEECCEEEECHHHHHHHHHCCCCCEEEEEC
GGFFVRIDGERLRELREKYGYSTTELAEMLGVSRKSVQRYEKGEGMVSIDVAIRLEEIFD
CCEEEEECHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHCCCEEEEHHHHHHHHHHC
EPLVKPIDIFKAKIEKVTLSSPPENELEKEVFDRLERLGMSVVKIKRAPFNAVTKEEDEE
CCCCCHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCC
VNLLTGIDEKKTPSTIRRVRLVNQIAEFVESEGVFVLNEKKTEVVGKVPIIPKDILNKVR
CHHEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHCCCCCCCHHHHHHHH
DVDELMEIIKELRSST
HHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMDKEQLTTVVEKMLNSIGFKTARVSFRGGCFDLVATRQILLLFIKTLVNIDKFTEEQAE
CCCHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLKRLAKLFRASALLVGLRTKNIELEDGVVYERFGIYAVNPETLFSILAGTEYPLVMAER
HHHHHHHHHHHHHHHHEEEECCEECCCCEEEEECCEEEECHHHHHHHHHCCCCCEEEEEC
GGFFVRIDGERLRELREKYGYSTTELAEMLGVSRKSVQRYEKGEGMVSIDVAIRLEEIFD
CCEEEEECHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHCCCEEEEHHHHHHHHHHC
EPLVKPIDIFKAKIEKVTLSSPPENELEKEVFDRLERLGMSVVKIKRAPFNAVTKEEDEE
CCCCCHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCC
VNLLTGIDEKKTPSTIRRVRLVNQIAEFVESEGVFVLNEKKTEVVGKVPIIPKDILNKVR
CHHEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHCCCCCCCHHHHHHHH
DVDELMEIIKELRSST
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA