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The map label for this gene is 18978198

Identifier: 18978198

GI number: 18978198

Start: 1685028

End: 1685810

Strand: Reverse

Name: 18978198

Synonym: PF1826

Alternate gene names: NA

Gene position: 1685810-1685028 (Counterclockwise)

Preceding gene: 18978199

Following gene: 18978197

Centisome position: 88.34

GC content: 42.66

Gene sequence:

>783_bases
ATGGCGTGGCATGTCTTCATTCCAGACTCTCTATTGGAGGAAGCAAATGACCCCAAAATAAAGGCATACAAAGTAGGCCA
AGTAGCAAGGGCATGTGCAATCTTCGGAGTAGAGCACATATGGATATACAAGGCGGGAGGAAAGGATGGGAAATTTATCA
AACTCCTCCTAGAATATGCAGAAACCCCTCAGTACCTGAGAAAAAGAATATTTCCTATTACTCCAGAGTTAAAGTATGCA
GGAGTCATTCCACCCCTCCAAATTCCAAGCCATAAACCAAAGGCTCCACCAAGGATAGGGGAAATACGAGAAGGCTATGC
CTACAGAAAAGGAAAGAAACTGTTTGCAGATATAGGGCTAGATAGACCAGCTTTGATCAAGGGAGTTGCAAGAGAAGGGA
GAGGAACCTTTAAGATAATATCAGTAAACCCTCTAAGAGTGATTCCAGCAGAACCTTCGGAGTACTGGGGATACAAGGTA
CATCTCAGTAGGAAAACATTGGCAAAAACACTTAAAAAGGCAAACCTCGACGTGGTCATCGCAACCTCGAGGAAGGGTGT
TGATGTGAGAAGTGCCGAAGTGCCCTTGGAGGGCGAGGTAGGAATAGTATTCGGCTCTCCAAAAAAAGGTGTAATAGAGA
TATTAAAGGAGTACAATGAGGATTATGAATTTGATTTAATCCTAAATACAATCCCTGAACAAAAAACAAAGACCGTTAGA
ACGGAGGAAGCCTTGCTTGCTACATTGGCGATATTTAATTTCATGAGGAAAAGGGGTGATTAA

Upstream 100 bases:

>100_bases
TTTTTGAATTGTGAGGGTGGAAACCTTCGAAACCCTTTTAAATTTATTATTGAAACACCACAACAGCTCTCATGATTAAA
AAGGGTGTTGGAGAGCAGAA

Downstream 100 bases:

>100_bases
AAATGGGTAAGGTTCACAGACCAAGAAGGGGATCATTGGGATTCAGCCCAAGAAAAAGGGCAAAAAGTATAGTTCCGAGA
ATTAGGAGTTGGCCAAAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MAWHVFIPDSLLEEANDPKIKAYKVGQVARACAIFGVEHIWIYKAGGKDGKFIKLLLEYAETPQYLRKRIFPITPELKYA
GVIPPLQIPSHKPKAPPRIGEIREGYAYRKGKKLFADIGLDRPALIKGVAREGRGTFKIISVNPLRVIPAEPSEYWGYKV
HLSRKTLAKTLKKANLDVVIATSRKGVDVRSAEVPLEGEVGIVFGSPKKGVIEILKEYNEDYEFDLILNTIPEQKTKTVR
TEEALLATLAIFNFMRKRGD

Sequences:

>Translated_260_residues
MAWHVFIPDSLLEEANDPKIKAYKVGQVARACAIFGVEHIWIYKAGGKDGKFIKLLLEYAETPQYLRKRIFPITPELKYA
GVIPPLQIPSHKPKAPPRIGEIREGYAYRKGKKLFADIGLDRPALIKGVAREGRGTFKIISVNPLRVIPAEPSEYWGYKV
HLSRKTLAKTLKKANLDVVIATSRKGVDVRSAEVPLEGEVGIVFGSPKKGVIEILKEYNEDYEFDLILNTIPEQKTKTVR
TEEALLATLAIFNFMRKRGD
>Mature_259_residues
AWHVFIPDSLLEEANDPKIKAYKVGQVARACAIFGVEHIWIYKAGGKDGKFIKLLLEYAETPQYLRKRIFPITPELKYAG
VIPPLQIPSHKPKAPPRIGEIREGYAYRKGKKLFADIGLDRPALIKGVAREGRGTFKIISVNPLRVIPAEPSEYWGYKVH
LSRKTLAKTLKKANLDVVIATSRKGVDVRSAEVPLEGEVGIVFGSPKKGVIEILKEYNEDYEFDLILNTIPEQKTKTVRT
EEALLATLAIFNFMRKRGD

Specific function: Unknown

COG id: COG2106

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI38679912, Length=297, Percent_Identity=31.3131313131313, Blast_Score=122, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI17551846, Length=301, Percent_Identity=27.906976744186, Blast_Score=78, Evalue=5e-15,
Organism=Drosophila melanogaster, GI20129839, Length=299, Percent_Identity=30.1003344481605, Blast_Score=97, Evalue=7e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003750 [H]

Pfam domain/function: PF02598 DUF171 [H]

EC number: NA

Molecular weight: Translated: 29270; Mature: 29138

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAWHVFIPDSLLEEANDPKIKAYKVGQVARACAIFGVEHIWIYKAGGKDGKFIKLLLEYA
CEEEEECCHHHHHCCCCCCEEEEEHHHHHHHHHHHCEEEEEEEECCCCCCHHHHHHHHHH
ETPQYLRKRIFPITPELKYAGVIPPLQIPSHKPKAPPRIGEIREGYAYRKGKKLFADIGL
CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCHHHHCCCEEEECCCC
DRPALIKGVAREGRGTFKIISVNPLRVIPAEPSEYWGYKVHLSRKTLAKTLKKANLDVVI
CCHHHHHHHHHCCCCEEEEEEECCEEEEECCCHHHCCEEEEECHHHHHHHHHHCCCCEEE
ATSRKGVDVRSAEVPLEGEVGIVFGSPKKGVIEILKEYNEDYEFDLILNTIPEQKTKTVR
EECCCCCCEECCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHH
TEEALLATLAIFNFMRKRGD
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AWHVFIPDSLLEEANDPKIKAYKVGQVARACAIFGVEHIWIYKAGGKDGKFIKLLLEYA
EEEEECCHHHHHCCCCCCEEEEEHHHHHHHHHHHCEEEEEEEECCCCCCHHHHHHHHHH
ETPQYLRKRIFPITPELKYAGVIPPLQIPSHKPKAPPRIGEIREGYAYRKGKKLFADIGL
CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCHHHHCCCEEEECCCC
DRPALIKGVAREGRGTFKIISVNPLRVIPAEPSEYWGYKVHLSRKTLAKTLKKANLDVVI
CCHHHHHHHHHCCCCEEEEEEECCEEEEECCCHHHCCEEEEECHHHHHHHHHHCCCCEEE
ATSRKGVDVRSAEVPLEGEVGIVFGSPKKGVIEILKEYNEDYEFDLILNTIPEQKTKTVR
EECCCCCCEECCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHH
TEEALLATLAIFNFMRKRGD
HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8241282; 11016950 [H]