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The map label for this gene is 18978199

Identifier: 18978199

GI number: 18978199

Start: 1685959

End: 1686798

Strand: Reverse

Name: 18978199

Synonym: PF1827

Alternate gene names: NA

Gene position: 1686798-1685959 (Counterclockwise)

Preceding gene: 33359575

Following gene: 18978198

Centisome position: 88.39

GC content: 37.86

Gene sequence:

>840_bases
GTGAAAGTTAAAACAATAATGACACCAAATCCAGTGACTATAACACTTCCTGCTACTAGAAACTATGCACTAGAGCTTTT
CAGGAAGCATAAGGTAAGAAGTTTCCCAGTAGTTAATAAAGAAGGAAAATTAGTTGGAATAATAAGCATAAAAAGAGTGC
TAACTAACGTAGATGAGGAACAACTAGCAATGCTAGTTAAAAGAGACGTTCCCACAGTTAAGCCAGATGATACCTTAAAG
AAAGCCGCCAAATTAATGCTCGAGTATGACTATAGAAGGGTTGTAGTTATTGATGAGGAAGGTAAACCTGTTGGTATACT
AACCGTTGGAGATATCATCAGGAGATATCTAGCAAAAAGCGAAAAATACAAAGATGTTGAAATTGAACCCTATTATCAGA
GATATGTGAGTGTTGTTTGGAGAGGAACTCCTCTTATGGCAGCACTTAAGGCTTTGCTGTTGTCAAACGCAATGGCATTG
CCAGTAATTGATGACGACGGTAAGTTAATTGGAATAGTAGATGAGACTGATCTCCTTAGAGATAGCGAAATCGTTAGGAT
TATGAAAAGCACTGAACTTGCCGCCTCAAGTGAAGAGGAATGGATTCTTGAGAGCCATCCAACCCTGCTCTTTGAGAAGT
TTGAACTTAAATTGCCAAATAAGCCAGTCGAGGATATTATGACTAGGGATGTTATAGTGGCAACTCCTCACATGACTGTG
CATGAAGTTGCAAGAAAAATGGTTAAATATAAAATAGAACAACTTCCTGTGATTAGAGGAGATGGGGATTTAGTAGGTTT
GATAAGGGATTTTGATCTTTTAAAGGTTCTCGTTAAGTAG

Upstream 100 bases:

>100_bases
CTTCTTTTTCTTTGCTCAGTATTTTATGTTGTTTCTTTTTACCTCTGTGATAAAACTTAAATATATCTAAAATCCCGTAG
TCTCATTTGGGTGGTAGACA

Downstream 100 bases:

>100_bases
TTTTTGGTTTTCTCCTTTTTCTTGAAAATTGCAAAAATTTTTTAAAAATTTTTGAATTGTGAGGGTGGAAACCTTCGAAA
CCCTTTTAAATTTATTATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MKVKTIMTPNPVTITLPATRNYALELFRKHKVRSFPVVNKEGKLVGIISIKRVLTNVDEEQLAMLVKRDVPTVKPDDTLK
KAAKLMLEYDYRRVVVIDEEGKPVGILTVGDIIRRYLAKSEKYKDVEIEPYYQRYVSVVWRGTPLMAALKALLLSNAMAL
PVIDDDGKLIGIVDETDLLRDSEIVRIMKSTELAASSEEEWILESHPTLLFEKFELKLPNKPVEDIMTRDVIVATPHMTV
HEVARKMVKYKIEQLPVIRGDGDLVGLIRDFDLLKVLVK

Sequences:

>Translated_279_residues
MKVKTIMTPNPVTITLPATRNYALELFRKHKVRSFPVVNKEGKLVGIISIKRVLTNVDEEQLAMLVKRDVPTVKPDDTLK
KAAKLMLEYDYRRVVVIDEEGKPVGILTVGDIIRRYLAKSEKYKDVEIEPYYQRYVSVVWRGTPLMAALKALLLSNAMAL
PVIDDDGKLIGIVDETDLLRDSEIVRIMKSTELAASSEEEWILESHPTLLFEKFELKLPNKPVEDIMTRDVIVATPHMTV
HEVARKMVKYKIEQLPVIRGDGDLVGLIRDFDLLKVLVK
>Mature_279_residues
MKVKTIMTPNPVTITLPATRNYALELFRKHKVRSFPVVNKEGKLVGIISIKRVLTNVDEEQLAMLVKRDVPTVKPDDTLK
KAAKLMLEYDYRRVVVIDEEGKPVGILTVGDIIRRYLAKSEKYKDVEIEPYYQRYVSVVWRGTPLMAALKALLLSNAMAL
PVIDDDGKLIGIVDETDLLRDSEIVRIMKSTELAASSEEEWILESHPTLLFEKFELKLPNKPVEDIMTRDVIVATPHMTV
HEVARKMVKYKIEQLPVIRGDGDLVGLIRDFDLLKVLVK

Specific function: Unknown

COG id: COG0517

COG function: function code R; FOG: CBS domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 4 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644 [H]

Pfam domain/function: PF00571 CBS [H]

EC number: NA

Molecular weight: Translated: 31804; Mature: 31804

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVKTIMTPNPVTITLPATRNYALELFRKHKVRSFPVVNKEGKLVGIISIKRVLTNVDEE
CCEEEEECCCCEEEEEECCCHHHHHHHHHHCCCCCCEECCCCCEEEEEEHHHHHCCCCHH
QLAMLVKRDVPTVKPDDTLKKAAKLMLEYDYRRVVVIDEEGKPVGILTVGDIIRRYLAKS
HHHHHHHHCCCCCCCCHHHHHHHHHHHEECCEEEEEECCCCCEEEEEEHHHHHHHHHHCC
EKYKDVEIEPYYQRYVSVVWRGTPLMAALKALLLSNAMALPVIDDDGKLIGIVDETDLLR
CCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCCCCEEEEECCCHHHC
DSEIVRIMKSTELAASSEEEWILESHPTLLFEKFELKLPNKPVEDIMTRDVIVATPHMTV
HHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEEEEECCCCCHHHHHCCCEEEECCCHHH
HEVARKMVKYKIEQLPVIRGDGDLVGLIRDFDLLKVLVK
HHHHHHHHHHHHHHCCEEECCCCEEEHHHHHHHHHHHCC
>Mature Secondary Structure
MKVKTIMTPNPVTITLPATRNYALELFRKHKVRSFPVVNKEGKLVGIISIKRVLTNVDEE
CCEEEEECCCCEEEEEECCCHHHHHHHHHHCCCCCCEECCCCCEEEEEEHHHHHCCCCHH
QLAMLVKRDVPTVKPDDTLKKAAKLMLEYDYRRVVVIDEEGKPVGILTVGDIIRRYLAKS
HHHHHHHHCCCCCCCCHHHHHHHHHHHEECCEEEEEECCCCCEEEEEEHHHHHHHHHHCC
EKYKDVEIEPYYQRYVSVVWRGTPLMAALKALLLSNAMALPVIDDDGKLIGIVDETDLLR
CCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCCCCEEEEECCCHHHC
DSEIVRIMKSTELAASSEEEWILESHPTLLFEKFELKLPNKPVEDIMTRDVIVATPHMTV
HHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEEEEECCCCCHHHHHCCCEEEECCCHHH
HEVARKMVKYKIEQLPVIRGDGDLVGLIRDFDLLKVLVK
HHHHHHHHHHHHHHCCEEECCCCEEEHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]