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The map label for this gene is yggU [C]

Identifier: 18978137

GI number: 18978137

Start: 1642596

End: 1642874

Strand: Reverse

Name: yggU [C]

Synonym: PF1765

Alternate gene names: 18978137

Gene position: 1642874-1642596 (Counterclockwise)

Preceding gene: 18978138

Following gene: 18978135

Centisome position: 86.09

GC content: 36.56

Gene sequence:

>279_bases
ATGCTTAGAGAAACTTCAGAAGGAGTAATTTTATCAGTCATAGTAGCTCCCAACGCTAGAGAAACAAAAATTGTTGGTAT
AGATGGAACTAGGGGTAGAGTGAAAGTAAATGTAGCGGCACCACCAGTAAAAGGAAAAGCAAACAAGGAGTTAATGAAGT
TCTTCAAAAAACTTTTCGGGGCAGAAGTTGTTATAGTAAGAGGTGAAACCTCTAGAGAGAAAGATCTCCTTATAAAAGGA
ATTACGAAGAAAGAAGTGATAGAGAAATTAGAGCTCTAA

Upstream 100 bases:

>100_bases
ATAGATGCTCCAATCCTCTTTGTAGGAGTAGGACAAGGATACGATGATCTAAGACCATTTGAAAAGGAATGGTTCTTAGA
GAGAATATTTGGTGAGGAAA

Downstream 100 bases:

>100_bases
AGATTCCCCTGGTTTTAGAATGACAACCTTTGCTTTTTCTCCTACCAACTTCTTGAACTCTTCTGGATCAGCAGCAATAG
GTGGCCAGGTGTTGTAATGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MLRETSEGVILSVIVAPNARETKIVGIDGTRGRVKVNVAAPPVKGKANKELMKFFKKLFGAEVVIVRGETSREKDLLIKG
ITKKEVIEKLEL

Sequences:

>Translated_92_residues
MLRETSEGVILSVIVAPNARETKIVGIDGTRGRVKVNVAAPPVKGKANKELMKFFKKLFGAEVVIVRGETSREKDLLIKG
ITKKEVIEKLEL
>Mature_92_residues
MLRETSEGVILSVIVAPNARETKIVGIDGTRGRVKVNVAAPPVKGKANKELMKFFKKLFGAEVVIVRGETSREKDLLIKG
ITKKEVIEKLEL

Specific function: Unknown

COG id: COG1872

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0235 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1765_PYRFU (Q8U052)

Other databases:

- EMBL:   AE009950
- RefSeq:   NP_579494.1
- ProteinModelPortal:   Q8U052
- SMR:   Q8U052
- EnsemblBacteria:   EBPYRT00000005603
- GeneID:   1469644
- GenomeReviews:   AE009950_GR
- KEGG:   pfu:PF1765
- NMPDR:   fig|186497.1.peg.1815
- GeneTree:   EBGT00050000022551
- HOGENOM:   HBG472132
- OMA:   AKKNEIG
- ProtClustDB:   PRK04021
- HAMAP:   MF_00634
- InterPro:   IPR005228
- InterPro:   IPR003746
- Gene3D:   G3DSA:3.30.1200.10
- TIGRFAMs:   TIGR00251

Pfam domain/function: PF02594 DUF167; SSF69786 DUF167

EC number: NA

Molecular weight: Translated: 10130; Mature: 10130

Theoretical pI: Translated: 10.72; Mature: 10.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRETSEGVILSVIVAPNARETKIVGIDGTRGRVKVNVAAPPVKGKANKELMKFFKKLFG
CCCCCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCC
AEVVIVRGETSREKDLLIKGITKKEVIEKLEL
CEEEEEECCCCCCCCEEEECCCHHHHHHHHCC
>Mature Secondary Structure
MLRETSEGVILSVIVAPNARETKIVGIDGTRGRVKVNVAAPPVKGKANKELMKFFKKLFG
CCCCCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCC
AEVVIVRGETSREKDLLIKGITKKEVIEKLEL
CEEEEEECCCCCCCCEEEECCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA