Click here to switch to the map view.

The map label for this gene is 18978119

Identifier: 18978119

GI number: 18978119

Start: 1624649

End: 1625638

Strand: Direct

Name: 18978119

Synonym: PF1747

Alternate gene names: NA

Gene position: 1624649-1625638 (Clockwise)

Preceding gene: 18978118

Following gene: 18978120

Centisome position: 85.14

GC content: 40.0

Gene sequence:

>990_bases
TTGAATCTCAAGAGAAGGAGGTTGTTAGATTTGAAGAGCGAGATATTTGAAAAGATTATCAAAATAGAAGGGAACAAAAT
TGACATAAAGCCTCCAAAAAAGATTCCTCAGCCTATTTTGTCTCCCTCTAGAGAAGGTTTTGATTCAAGAAACACTTACA
ATCCTGCGGTTATTAAAGAGAAGGACAGGATAGTAATGCTTTACAGAGCAGAATCCAAAGAAGATAAGCTGACGGGCAGG
ATTGGGCTTGCAATAAGTTACGATGGCATTAACTTTTTTAGACATCCAGAACCAATAATTGAACCCGAATACAAGTGGGA
AAGTGTTGGTGTTGAAGATCCAAGGATAGTGAAGGTTGGTAAGACGTACTATATGACTTACACCGGTTACGATGGTAAAA
CAGCGAGGTTGTGTCTGGCGACCTCAAAGAATATGCTAACATGGAAGAAACACGGGCCAATTTTTGAAGGTTTTGAGTAC
AAAAAGAACAACATCAAAGGTTGGACAAAAAGCGGCGCAATCTTGCCAAAAAAGCTTGAAAAAGGCAATTTTAAGGGAAA
CTACTTGATGTATTTTGGCGATTCAAATATCTGGATGGCAGTTTCAAAGGACTTGGTCAACTGGGAGTACATGAAAGAGC
CTGTGCTATCTCCAAGAGAAGGATACTTCGATAACGTTCTGGTTGAACCTGGCCCACCTTTGTTTGAGACTAGCTATGGA
ATAGCTTTGATTTACAATAGCGCTGGCAGATATGGAGATAAGTTAAAGTACAAAGTGGGAGTTGTAATTTTCGATAAAGA
ATACCCAGATAAGGTTGTTGCAAGGACTGAAACCCCACTAATGGTTCCGGAGTATGAATGGGAGCTTTATGGCCACGTTA
ATAATGTCGTCTTTGTTGAAGGCATGGTGGAACACGAGAACAAGATTTTGCTGTATTACGGTGGAGCTGATAGGCATATT
GGTTTAGCCTACTGGACAACAGACTTATAA

Upstream 100 bases:

>100_bases
TTAGGTCTTAAAGCTGAAAAAGAACTAACTGTTTCCCCCTTATTGCCCAAAAACTTTAAGGTTTCAGCGTTGGTTAGGTT
TAGAAGGAAGGCATACTTGA

Downstream 100 bases:

>100_bases
AACCATATAACTCATTAAATCCGATGAGAATGAAGTGGAGAAACTTCATAGTTTTCCTACCTCTTGTTTTCCTCTTCATG
TTCTTTTATTTCCCTCTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: Glycosidase Related Protein; Glycosylase; Glycosidase-Like Protein; Conserved Domain Protein; Glycosidase-Related; Glycosidase-Related Protein; Cytoplasmic Protein; Glycosylase-Like Protein; Unknwon Conserved Protein

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MNLKRRRLLDLKSEIFEKIIKIEGNKIDIKPPKKIPQPILSPSREGFDSRNTYNPAVIKEKDRIVMLYRAESKEDKLTGR
IGLAISYDGINFFRHPEPIIEPEYKWESVGVEDPRIVKVGKTYYMTYTGYDGKTARLCLATSKNMLTWKKHGPIFEGFEY
KKNNIKGWTKSGAILPKKLEKGNFKGNYLMYFGDSNIWMAVSKDLVNWEYMKEPVLSPREGYFDNVLVEPGPPLFETSYG
IALIYNSAGRYGDKLKYKVGVVIFDKEYPDKVVARTETPLMVPEYEWELYGHVNNVVFVEGMVEHENKILLYYGGADRHI
GLAYWTTDL

Sequences:

>Translated_329_residues
MNLKRRRLLDLKSEIFEKIIKIEGNKIDIKPPKKIPQPILSPSREGFDSRNTYNPAVIKEKDRIVMLYRAESKEDKLTGR
IGLAISYDGINFFRHPEPIIEPEYKWESVGVEDPRIVKVGKTYYMTYTGYDGKTARLCLATSKNMLTWKKHGPIFEGFEY
KKNNIKGWTKSGAILPKKLEKGNFKGNYLMYFGDSNIWMAVSKDLVNWEYMKEPVLSPREGYFDNVLVEPGPPLFETSYG
IALIYNSAGRYGDKLKYKVGVVIFDKEYPDKVVARTETPLMVPEYEWELYGHVNNVVFVEGMVEHENKILLYYGGADRHI
GLAYWTTDL
>Mature_329_residues
MNLKRRRLLDLKSEIFEKIIKIEGNKIDIKPPKKIPQPILSPSREGFDSRNTYNPAVIKEKDRIVMLYRAESKEDKLTGR
IGLAISYDGINFFRHPEPIIEPEYKWESVGVEDPRIVKVGKTYYMTYTGYDGKTARLCLATSKNMLTWKKHGPIFEGFEY
KKNNIKGWTKSGAILPKKLEKGNFKGNYLMYFGDSNIWMAVSKDLVNWEYMKEPVLSPREGYFDNVLVEPGPPLFETSYG
IALIYNSAGRYGDKLKYKVGVVIFDKEYPDKVVARTETPLMVPEYEWELYGHVNNVVFVEGMVEHENKILLYYGGADRHI
GLAYWTTDL

Specific function: Unknown

COG id: COG2152

COG function: function code G; Predicted glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38086; Mature: 38086

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLKRRRLLDLKSEIFEKIIKIEGNKIDIKPPKKIPQPILSPSREGFDSRNTYNPAVIKE
CCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCHHCCCHHCCCCCCCCCCCCCCCCCEEEC
KDRIVMLYRAESKEDKLTGRIGLAISYDGINFFRHPEPIIEPEYKWESVGVEDPRIVKVG
CCCEEEEEECCCCCCCCEEEEEEEEEECCEEECCCCCCCCCCCCCEEECCCCCCEEEEEC
KTYYMTYTGYDGKTARLCLATSKNMLTWKKHGPIFEGFEYKKNNIKGWTKSGAILPKKLE
CEEEEEEECCCCCEEEEEEEECCCEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCHHHH
KGNFKGNYLMYFGDSNIWMAVSKDLVNWEYMKEPVLSPREGYFDNVLVEPGPPLFETSYG
CCCCCCCEEEEECCCCEEEEEECCCCCHHHHHCCCCCCCCCCCCCEEECCCCCCEECCCC
IALIYNSAGRYGDKLKYKVGVVIFDKEYPDKVVARTETPLMVPEYEWELYGHVNNVVFVE
EEEEECCCCCCCCEEEEEEEEEEECCCCCCHHEEECCCCEECCCCCEEEEECCCCEEEEE
GMVEHENKILLYYGGADRHIGLAYWTTDL
EEEECCCEEEEEECCCCCEEEEEEEEECC
>Mature Secondary Structure
MNLKRRRLLDLKSEIFEKIIKIEGNKIDIKPPKKIPQPILSPSREGFDSRNTYNPAVIKE
CCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCHHCCCHHCCCCCCCCCCCCCCCCCEEEC
KDRIVMLYRAESKEDKLTGRIGLAISYDGINFFRHPEPIIEPEYKWESVGVEDPRIVKVG
CCCEEEEEECCCCCCCCEEEEEEEEEECCEEECCCCCCCCCCCCCEEECCCCCCEEEEEC
KTYYMTYTGYDGKTARLCLATSKNMLTWKKHGPIFEGFEYKKNNIKGWTKSGAILPKKLE
CEEEEEEECCCCCEEEEEEEECCCEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCHHHH
KGNFKGNYLMYFGDSNIWMAVSKDLVNWEYMKEPVLSPREGYFDNVLVEPGPPLFETSYG
CCCCCCCEEEEECCCCEEEEEECCCCCHHHHHCCCCCCCCCCCCCEEECCCCCCEECCCC
IALIYNSAGRYGDKLKYKVGVVIFDKEYPDKVVARTETPLMVPEYEWELYGHVNNVVFVE
EEEEECCCCCCCCEEEEEEEEEEECCCCCCHHEEECCCCEECCCCCEEEEECCCCEEEEE
GMVEHENKILLYYGGADRHIGLAYWTTDL
EEEECCCEEEEEECCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA