| Definition | Pyrococcus furiosus DSM 3638, complete genome. |
|---|---|
| Accession | NC_003413 |
| Length | 1,908,256 |
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The map label for this gene is hisD
Identifier: 18978031
GI number: 18978031
Start: 1544485
End: 1545612
Strand: Direct
Name: hisD
Synonym: PF1659
Alternate gene names: 18978031
Gene position: 1544485-1545612 (Clockwise)
Preceding gene: 18978030
Following gene: 18978032
Centisome position: 80.94
GC content: 40.51
Gene sequence:
>1128_bases ATGGACATTGAAGAATACGTCAGGGAGATTTTGAAAGATATCCGGGAAAGAGGATTAGAGGCAATAAGAGAGTACTCAAA AAAATTCGACGGATATGAAGGCCCATTTGAAGTCTCAAAGGAGGAGTTTAAGGAAGCTGAAGAAAGAATTCCAGAAAGGG ATAAAGAAATTATAAAGAGAACTCTCAAGAGAATTGAGAAATACCATAGAAAACAACTAAAGCAGGACATTTTATACATC GAGAATGGCTCTCTCTATGGGCTAATATACAAGCCACTCAAGAGAATAGGGATATATGTCCCAGGTGGGAAACCGCTGCC TTCAACTCTAATGATGGTAGGAGTCCCCGCAAGGGTCGCTGGAGTTAAGGAAATCGTTGTAACAAACCCACCCAAAGATG GGAAAGTAAATCCATACATCCTGTACATAGCAAAACTCCTCAAGATTGAAGAAGTATACAAGCTCGGAGGAATTCAGGCA ATAGCTGCCATGGCTTATGGTATTGGAATGAAAAAGGTCCAAAAGATCTTTGGGCCTGGGAATAAGTTTGTCAATGAAGC AAAGAGACAAGTTTTTGGAATTGTCGGGATAGACAGTTTGGCTGGCCCTTCTGAAATAGCAGTAATTGCAGATGAAAGTG CGGATAAAGATTTCGTTCTTTACGATTTGTTAAGCCAATTAGAACACGGAAAAGATAGCAAGGCATGGTTATTGACGACG TCAAAAGAACTAGCAGATTACTGTAATAGAGAGGGAATAACAGTTATCGTGTGTAGCTCTCTTGAGGAATGCTGTAAGAA AGCTAATGAAATAGCTCCAGAACACCTTGAGATAATAACTAGAGAACCCCTAAAATTGGTAGACTTAATTGAAAATGCAG GTGCGATATACCTAGGGCTATACACACCAGTTCCTGCAGCTGACTACTTCTTAGGAGTTAATCACGTTCTCCCAACGGGA GGTGCGGCAAAATTCATGGGTGTTCTCACAGTTTGGGACTTCATGAAGCCAATAAGCATTGCAATGGTTAGTAGAGAGGA GTTTATCTCTGAAAGAGAGCTGGGAATAAGATTAGCTGAAATAGAAGGAATAGAACTCCACAAAAAGAGCTTGGAGGTTA GAAAATGA
Upstream 100 bases:
>100_bases ATAATGGATGTTTCAGCGCTCCTCTTAGTAAATCGCATTTCTCAAAAGATGTTCTTTGAAGAAATTAATTCTTTCATAAC AAAAATTAGGAGGTCTGTTT
Downstream 100 bases:
>100_bases GAAAGAAGGCTAATCATTGTGAAATCAACTGTGTAATTAAAGATACCTTTTATTGGGGTGAAGAAAGTGAGGAGAACTAC AAAAGAAACGGATATAATTG
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MDIEEYVREILKDIRERGLEAIREYSKKFDGYEGPFEVSKEEFKEAEERIPERDKEIIKRTLKRIEKYHRKQLKQDILYI ENGSLYGLIYKPLKRIGIYVPGGKPLPSTLMMVGVPARVAGVKEIVVTNPPKDGKVNPYILYIAKLLKIEEVYKLGGIQA IAAMAYGIGMKKVQKIFGPGNKFVNEAKRQVFGIVGIDSLAGPSEIAVIADESADKDFVLYDLLSQLEHGKDSKAWLLTT SKELADYCNREGITVIVCSSLEECCKKANEIAPEHLEIITREPLKLVDLIENAGAIYLGLYTPVPAADYFLGVNHVLPTG GAAKFMGVLTVWDFMKPISIAMVSREEFISERELGIRLAEIEGIELHKKSLEVRK
Sequences:
>Translated_375_residues MDIEEYVREILKDIRERGLEAIREYSKKFDGYEGPFEVSKEEFKEAEERIPERDKEIIKRTLKRIEKYHRKQLKQDILYI ENGSLYGLIYKPLKRIGIYVPGGKPLPSTLMMVGVPARVAGVKEIVVTNPPKDGKVNPYILYIAKLLKIEEVYKLGGIQA IAAMAYGIGMKKVQKIFGPGNKFVNEAKRQVFGIVGIDSLAGPSEIAVIADESADKDFVLYDLLSQLEHGKDSKAWLLTT SKELADYCNREGITVIVCSSLEECCKKANEIAPEHLEIITREPLKLVDLIENAGAIYLGLYTPVPAADYFLGVNHVLPTG GAAKFMGVLTVWDFMKPISIAMVSREEFISERELGIRLAEIEGIELHKKSLEVRK >Mature_375_residues MDIEEYVREILKDIRERGLEAIREYSKKFDGYEGPFEVSKEEFKEAEERIPERDKEIIKRTLKRIEKYHRKQLKQDILYI ENGSLYGLIYKPLKRIGIYVPGGKPLPSTLMMVGVPARVAGVKEIVVTNPPKDGKVNPYILYIAKLLKIEEVYKLGGIQA IAAMAYGIGMKKVQKIFGPGNKFVNEAKRQVFGIVGIDSLAGPSEIAVIADESADKDFVLYDLLSQLEHGKDSKAWLLTT SKELADYCNREGITVIVCSSLEECCKKANEIAPEHLEIITREPLKLVDLIENAGAIYLGLYTPVPAADYFLGVNHVLPTG GAAKFMGVLTVWDFMKPISIAMVSREEFISERELGIRLAEIEGIELHKKSLEVRK
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family
Homologues:
Organism=Escherichia coli, GI1788331, Length=398, Percent_Identity=39.1959798994975, Blast_Score=263, Evalue=2e-71, Organism=Saccharomyces cerevisiae, GI6319819, Length=405, Percent_Identity=36.5432098765432, Blast_Score=244, Evalue=2e-65,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HISX_PYRFU (O59626)
Other databases:
- EMBL: AB013080 - EMBL: AE009950 - RefSeq: NP_579388.1 - ProteinModelPortal: O59626 - SMR: O59626 - EnsemblBacteria: EBPYRT00000004782 - GeneID: 1469536 - GenomeReviews: AE009950_GR - KEGG: pfu:PF1659 - NMPDR: fig|186497.1.peg.1707 - GeneTree: EBGT00050000023439 - HOGENOM: HBG329596 - OMA: TEWEVEK - ProtClustDB: PRK00877 - BRENDA: 1.1.1.23 - HAMAP: MF_01024 - InterPro: IPR016161 - InterPro: IPR001692 - InterPro: IPR012131 - PANTHER: PTHR21256:SF2 - PRINTS: PR00083 - TIGRFAMs: TIGR00069
Pfam domain/function: PF00815 Histidinol_dh; SSF53720 Aldehyde_DH/Histidinol_DH
EC number: =1.1.1.23
Molecular weight: Translated: 42179; Mature: 42179
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: ACT_SITE 274-274 ACT_SITE 275-275 BINDING 99-99 BINDING 159-159 BINDING 181-181 BINDING 204-204 BINDING 226-226 BINDING 229-229 BINDING 275-275 BINDING 308-308 BINDING 362-362 BINDING 367-367
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIEEYVREILKDIRERGLEAIREYSKKFDGYEGPFEVSKEEFKEAEERIPERDKEIIKR CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHH TLKRIEKYHRKQLKQDILYIENGSLYGLIYKPLKRIGIYVPGGKPLPSTLMMVGVPARVA HHHHHHHHHHHHHHHHEEEEECCCEEEHHHHHHHHCEEECCCCCCCCHHHHHHCCCHHHH GVKEIVVTNPPKDGKVNPYILYIAKLLKIEEVYKLGGIQAIAAMAYGIGMKKVQKIFGPG CCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHCCC NKFVNEAKRQVFGIVGIDSLAGPSEIAVIADESADKDFVLYDLLSQLEHGKDSKAWLLTT HHHHHHHHHHHHHEECCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEC SKELADYCNREGITVIVCSSLEECCKKANEIAPEHLEIITREPLKLVDLIENAGAIYLGL CHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHCCCEEEEEE YTPVPAADYFLGVNHVLPTGGAAKFMGVLTVWDFMKPISIAMVSREEFISERELGIRLAE CCCCCHHHHHHCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEE IEGIELHKKSLEVRK ECCHHHHHHHHCCCC >Mature Secondary Structure MDIEEYVREILKDIRERGLEAIREYSKKFDGYEGPFEVSKEEFKEAEERIPERDKEIIKR CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHH TLKRIEKYHRKQLKQDILYIENGSLYGLIYKPLKRIGIYVPGGKPLPSTLMMVGVPARVA HHHHHHHHHHHHHHHHEEEEECCCEEEHHHHHHHHCEEECCCCCCCCHHHHHHCCCHHHH GVKEIVVTNPPKDGKVNPYILYIAKLLKIEEVYKLGGIQAIAAMAYGIGMKKVQKIFGPG CCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHCCC NKFVNEAKRQVFGIVGIDSLAGPSEIAVIADESADKDFVLYDLLSQLEHGKDSKAWLLTT HHHHHHHHHHHHHEECCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEC SKELADYCNREGITVIVCSSLEECCKKANEIAPEHLEIITREPLKLVDLIENAGAIYLGL CHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHCCCEEEEEE YTPVPAADYFLGVNHVLPTGGAAKFMGVLTVWDFMKPISIAMVSREEFISERELGIRLAE CCCCCHHHHHHCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEE IEGIELHKKSLEVRK ECCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA