| Definition | Pyrococcus furiosus DSM 3638, complete genome. |
|---|---|
| Accession | NC_003413 |
| Length | 1,908,256 |
Click here to switch to the map view.
The map label for this gene is 18978024
Identifier: 18978024
GI number: 18978024
Start: 1537755
End: 1538318
Strand: Direct
Name: 18978024
Synonym: PF1652
Alternate gene names: NA
Gene position: 1537755-1538318 (Clockwise)
Preceding gene: 18978007
Following gene: 18978026
Centisome position: 80.58
GC content: 35.82
Gene sequence:
>564_bases GTGGGGGCCCACTTCTCCACAACAGTTAAAAATATTAAAATTTATAAAAACTTAGTGAAACATATGAATTCTAGATCTAT GAATCTTAAAGCAATGCTCATAATAGGAATAACAATTCTTTTTCTTGGTTGTTTAGCTCAAAAAGAACAGGAAGCGTCCA AAGAGGGAATACTTCGCATAGGAGTCAAAATAGAAGAGAAAGAAGGCAACAAAGTTCTAACAAAGATTTTCATAAAAAAT GTGGGAAATTCCACAGTCAGAGTAGCTAAGCCAATATACTTTGTTACCTTAAAGTTTGAGCTCTATAAGGGAAATGAGAG TATGAAATTCAGAGGTCCCGTACCAACTTACCTTCCCCTAACTAAAGAGGAAACAAAAGTTCTTAAACCTAGGGAAACCT TAGAAGCAGAATACATTGTTGACCTCTGCTGGTGGAATGTCACTAAAGGAGAATATACCCTCGCTGTTATTTATGATACA ATAGAAACAAAGAGCCAAGGTGTAGATTTCGTCAGGCAAAGACTAGTCATAAAACAGAACGTCACGGCAAAAGAAACATG TTAA
Upstream 100 bases:
>100_bases TCTAATGCAGACTTCAATTGTTTTTGTCTTTAACGGCCCACCAGGAGTTTCTGAATAGTAGTGGCTCACATCCAAAAATA TTTGTGAGAAGCTTATAAAT
Downstream 100 bases:
>100_bases CCTAATTTAAAGCTTTTCATTGCCATAAAGTATTGGTGTTCGCGAATAAGTTCATTTAATAACTCCTCAAGTCTCCAAGT TAGAGAGATAGGGGTAGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MGAHFSTTVKNIKIYKNLVKHMNSRSMNLKAMLIIGITILFLGCLAQKEQEASKEGILRIGVKIEEKEGNKVLTKIFIKN VGNSTVRVAKPIYFVTLKFELYKGNESMKFRGPVPTYLPLTKEETKVLKPRETLEAEYIVDLCWWNVTKGEYTLAVIYDT IETKSQGVDFVRQRLVIKQNVTAKETC
Sequences:
>Translated_187_residues MGAHFSTTVKNIKIYKNLVKHMNSRSMNLKAMLIIGITILFLGCLAQKEQEASKEGILRIGVKIEEKEGNKVLTKIFIKN VGNSTVRVAKPIYFVTLKFELYKGNESMKFRGPVPTYLPLTKEETKVLKPRETLEAEYIVDLCWWNVTKGEYTLAVIYDT IETKSQGVDFVRQRLVIKQNVTAKETC >Mature_186_residues GAHFSTTVKNIKIYKNLVKHMNSRSMNLKAMLIIGITILFLGCLAQKEQEASKEGILRIGVKIEEKEGNKVLTKIFIKNV GNSTVRVAKPIYFVTLKFELYKGNESMKFRGPVPTYLPLTKEETKVLKPRETLEAEYIVDLCWWNVTKGEYTLAVIYDTI ETKSQGVDFVRQRLVIKQNVTAKETC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21366; Mature: 21234
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAHFSTTVKNIKIYKNLVKHMNSRSMNLKAMLIIGITILFLGCLAQKEQEASKEGILRI CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE GVKIEEKEGNKVLTKIFIKNVGNSTVRVAKPIYFVTLKFELYKGNESMKFRGPVPTYLPL EEEEECCCCCHHHHHHHHHHCCCCEEEEECCEEEEEEEEEEEECCCCEEEECCCCCCCCC TKEETKVLKPRETLEAEYIVDLCWWNVTKGEYTLAVIYDTIETKSQGVDFVRQRLVIKQN CCCHHHHCCCHHHHHHHHEEEEEEEECCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCC VTAKETC CCCCCCC >Mature Secondary Structure GAHFSTTVKNIKIYKNLVKHMNSRSMNLKAMLIIGITILFLGCLAQKEQEASKEGILRI CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE GVKIEEKEGNKVLTKIFIKNVGNSTVRVAKPIYFVTLKFELYKGNESMKFRGPVPTYLPL EEEEECCCCCHHHHHHHHHHCCCCEEEEECCEEEEEEEEEEEECCCCEEEECCCCCCCCC TKEETKVLKPRETLEAEYIVDLCWWNVTKGEYTLAVIYDTIETKSQGVDFVRQRLVIKQN CCCHHHHCCCHHHHHHHHEEEEEEEECCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCC VTAKETC CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA