| Definition | Pyrococcus furiosus DSM 3638, complete genome. |
|---|---|
| Accession | NC_003413 |
| Length | 1,908,256 |
Click here to switch to the map view.
The map label for this gene is 18977986
Identifier: 18977986
GI number: 18977986
Start: 1503856
End: 1505319
Strand: Reverse
Name: 18977986
Synonym: PF1614
Alternate gene names: NA
Gene position: 1505319-1503856 (Counterclockwise)
Preceding gene: 18977987
Following gene: 18977985
Centisome position: 78.88
GC content: 37.3
Gene sequence:
>1464_bases ATGACTTTTCCTCTTCTATATATTCCTTCTTTGACACCTGAAAAAAGGGTAAAAATATTTTTGTCAGAGATTAGGGAGGA CTATGTATCCCTAAGAGGCTTTATTATTTTAAGAAAACCTCCCTGTGATGTTCCATTTAAATACATTGAGTATCTCTTGT CCCCTTTAGCCCCAAGTGAGATTAGCAAGTCTAAGATTAAAGCCTACGCCGTTGTTAGAATTACGGAAAAGACTGAGATA AAAGGAAGGCTACATAGTGGTGGTTATGTAAAGGTTGAAGGACGTGTCGAGCCATATCCTTGTGGCAATATGAGAGTTAT AACAGCTGATTCAATAGTCACTGAAGATTTCTCAAAATATTGGGCCTTGAAGGAGTATTCTCTCTCCCCTAAAGAAATTA GGAAAATCATTGGCTCAGCTCTTTATGCAAGTGCTGAGCTTCAAGACTCGTTTTTGTATTCTCTCTTTGGTGCTCCATAT ATAATGAAGAATCCGCTAAATTGGAGGGAAGGATACAACTTATTTGTCATGAAAAATAATGAGAGGATTGTTAAGTCCCT CTTTGAGTTTTTTAAGGGGTTTACTGAGTTACTTCCAAGAGAATTGCGGGTTGAAAGAGATGACAAGTGGATGTTTGCAG ACGAGTTTTTAGATCTCGATTTCAAAGTTTTTAACCCAAATAACACTGATATAAGATACTATGCTCCCAAAAATATCAGA AATGTCCTTCCTAAGTGGCTCAAAGGTAAGTTTGAAAGGAAAGAATTTATCTACTTTATTCCCAGGAAATCGAAACCAGA TATAAGAGATTACTATGCAAAGTACTCGGAAACTCCCTTTATCTTATATGAACCAATAGAATTTGAGTTCTCTGAACTAA GAGAGTACCTTCCAAACATTCTTGCAACGGTGTTTTGGAGAAGGACAACACTCCCAGCATTGAACCCACTCTCGGAAGAA ATTAGGGTATTTAGGGAGCTTTTTGAACACTGGCTCTGGAAAAATAGGTATGAATATGGGGAAATTATAGATGCTCTCCT TGTTAAGGACAGTCTCTTCAACCTGAATAGGAGGTACTTGTTATCTTTAAATGTGTTAGGTTCTATAGCAAGGTTAATTG GGAAGATAGAAAAGAGCTATATGAACCTAGTTCTTAACATAGAGCAGGAAATCTTAGATACTTGGATTAATGAAGTTCCA AAAGCTGAAATAGACGCTTTTCTGGCTGAATACAAGAAAAACTATTTGGGAGATGATAGAGTACTACCAAAAGCTCTCCA AGTTATACTTGACTTGTCTTCCACTTCCGTTGATGGGCTAATTAGTAAGGAGGAGATAATGGAGACTCTCTTAAGATTGG GTTTCACGAAAGCCAAAGCTGAGGAAAGTATAGAAAAGCTAGTTGCTAATGGCTATATATATGAGCCTGTTTCTGGGTTT TACAAGGTGGTGAAGAGTGGCTAA
Upstream 100 bases:
>100_bases CAAGAATGTAGACAATGTAGTTAAGGTTGTAAGTGAGGCAGGAATAGCGAAGCTAGTGGCAAGAATGAGGCCAATAGGAG TGGCAAAAGGATGATGTTCT
Downstream 100 bases:
>100_bases ATACAATGAGAAAAAAGAAAAAAAGAGAATTGCAAAAGAGAGAATCGATATCTTGTTTAGCTTAGCTGAGAGAGTTTTCC CTTATTCTCCTGAATTAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 487; Mature: 486
Protein sequence:
>487_residues MTFPLLYIPSLTPEKRVKIFLSEIREDYVSLRGFIILRKPPCDVPFKYIEYLLSPLAPSEISKSKIKAYAVVRITEKTEI KGRLHSGGYVKVEGRVEPYPCGNMRVITADSIVTEDFSKYWALKEYSLSPKEIRKIIGSALYASAELQDSFLYSLFGAPY IMKNPLNWREGYNLFVMKNNERIVKSLFEFFKGFTELLPRELRVERDDKWMFADEFLDLDFKVFNPNNTDIRYYAPKNIR NVLPKWLKGKFERKEFIYFIPRKSKPDIRDYYAKYSETPFILYEPIEFEFSELREYLPNILATVFWRRTTLPALNPLSEE IRVFRELFEHWLWKNRYEYGEIIDALLVKDSLFNLNRRYLLSLNVLGSIARLIGKIEKSYMNLVLNIEQEILDTWINEVP KAEIDAFLAEYKKNYLGDDRVLPKALQVILDLSSTSVDGLISKEEIMETLLRLGFTKAKAEESIEKLVANGYIYEPVSGF YKVVKSG
Sequences:
>Translated_487_residues MTFPLLYIPSLTPEKRVKIFLSEIREDYVSLRGFIILRKPPCDVPFKYIEYLLSPLAPSEISKSKIKAYAVVRITEKTEI KGRLHSGGYVKVEGRVEPYPCGNMRVITADSIVTEDFSKYWALKEYSLSPKEIRKIIGSALYASAELQDSFLYSLFGAPY IMKNPLNWREGYNLFVMKNNERIVKSLFEFFKGFTELLPRELRVERDDKWMFADEFLDLDFKVFNPNNTDIRYYAPKNIR NVLPKWLKGKFERKEFIYFIPRKSKPDIRDYYAKYSETPFILYEPIEFEFSELREYLPNILATVFWRRTTLPALNPLSEE IRVFRELFEHWLWKNRYEYGEIIDALLVKDSLFNLNRRYLLSLNVLGSIARLIGKIEKSYMNLVLNIEQEILDTWINEVP KAEIDAFLAEYKKNYLGDDRVLPKALQVILDLSSTSVDGLISKEEIMETLLRLGFTKAKAEESIEKLVANGYIYEPVSGF YKVVKSG >Mature_486_residues TFPLLYIPSLTPEKRVKIFLSEIREDYVSLRGFIILRKPPCDVPFKYIEYLLSPLAPSEISKSKIKAYAVVRITEKTEIK GRLHSGGYVKVEGRVEPYPCGNMRVITADSIVTEDFSKYWALKEYSLSPKEIRKIIGSALYASAELQDSFLYSLFGAPYI MKNPLNWREGYNLFVMKNNERIVKSLFEFFKGFTELLPRELRVERDDKWMFADEFLDLDFKVFNPNNTDIRYYAPKNIRN VLPKWLKGKFERKEFIYFIPRKSKPDIRDYYAKYSETPFILYEPIEFEFSELREYLPNILATVFWRRTTLPALNPLSEEI RVFRELFEHWLWKNRYEYGEIIDALLVKDSLFNLNRRYLLSLNVLGSIARLIGKIEKSYMNLVLNIEQEILDTWINEVPK AEIDAFLAEYKKNYLGDDRVLPKALQVILDLSSTSVDGLISKEEIMETLLRLGFTKAKAEESIEKLVANGYIYEPVSGFY KVVKSG
Specific function: Unknown
COG id: COG1241
COG function: function code L; Predicted ATPase involved in replication control, Cdc46/Mcm family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57187; Mature: 57056
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFPLLYIPSLTPEKRVKIFLSEIREDYVSLRGFIILRKPPCDVPFKYIEYLLSPLAPSE CCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHCCCCCCH ISKSKIKAYAVVRITEKTEIKGRLHSGGYVKVEGRVEPYPCGNMRVITADSIVTEDFSKY HHHHHHEEEEEEEEECCHHHCCEECCCCEEEECCCCCCCCCCCEEEEECCHHHHHHHHHH WALKEYSLSPKEIRKIIGSALYASAELQDSFLYSLFGAPYIMKNPLNWREGYNLFVMKNN HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHCCCEEEEEECC ERIVKSLFEFFKGFTELLPRELRVERDDKWMFADEFLDLDFKVFNPNNTDIRYYAPKNIR HHHHHHHHHHHHHHHHHCCHHHCCCCCCCEEEHHHHHCCEEEEECCCCCCEEEECCHHHH NVLPKWLKGKFERKEFIYFIPRKSKPDIRDYYAKYSETPFILYEPIEFEFSELREYLPNI HHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHH LATVFWRRTTLPALNPLSEEIRVFRELFEHWLWKNRYEYGEIIDALLVKDSLFNLNRRYL HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEE LSLNVLGSIARLIGKIEKSYMNLVLNIEQEILDTWINEVPKAEIDAFLAEYKKNYLGDDR EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCC VLPKALQVILDLSSTSVDGLISKEEIMETLLRLGFTKAKAEESIEKLVANGYIYEPVSGF HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEECCHHHH YKVVKSG HHHHHCC >Mature Secondary Structure TFPLLYIPSLTPEKRVKIFLSEIREDYVSLRGFIILRKPPCDVPFKYIEYLLSPLAPSE CCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHCCCCCCH ISKSKIKAYAVVRITEKTEIKGRLHSGGYVKVEGRVEPYPCGNMRVITADSIVTEDFSKY HHHHHHEEEEEEEEECCHHHCCEECCCCEEEECCCCCCCCCCCEEEEECCHHHHHHHHHH WALKEYSLSPKEIRKIIGSALYASAELQDSFLYSLFGAPYIMKNPLNWREGYNLFVMKNN HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHCCCEEEEEECC ERIVKSLFEFFKGFTELLPRELRVERDDKWMFADEFLDLDFKVFNPNNTDIRYYAPKNIR HHHHHHHHHHHHHHHHHCCHHHCCCCCCCEEEHHHHHCCEEEEECCCCCCEEEECCHHHH NVLPKWLKGKFERKEFIYFIPRKSKPDIRDYYAKYSETPFILYEPIEFEFSELREYLPNI HHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHH LATVFWRRTTLPALNPLSEEIRVFRELFEHWLWKNRYEYGEIIDALLVKDSLFNLNRRYL HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEE LSLNVLGSIARLIGKIEKSYMNLVLNIEQEILDTWINEVPKAEIDAFLAEYKKNYLGDDR EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCC VLPKALQVILDLSSTSVDGLISKEEIMETLLRLGFTKAKAEESIEKLVANGYIYEPVSGF HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEECCHHHH YKVVKSG HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA