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The map label for this gene is ybfF [C]

Identifier: 18977978

GI number: 18977978

Start: 1497260

End: 1497907

Strand: Direct

Name: ybfF [C]

Synonym: PF1606

Alternate gene names: 18977978

Gene position: 1497260-1497907 (Clockwise)

Preceding gene: 18977970

Following gene: 18977979

Centisome position: 78.46

GC content: 36.57

Gene sequence:

>648_bases
ATGTTTGGAAAATACAAGGTGTCCGTAATAATTCCAGCATACAACGAAGAAAAACGAATAGGAAATGTTCTGGCTAGAAT
ACCAGATTTTGTTGATGAAGTCATTGTGATTGACGATGGTAGTTCTGATGCCACCTATGAAGTAGCCAAAAGATATACAG
ACAAAGCAATAAGATTAAATAAAAATATGGGGAAAGGAGCTGCTCTTAGAGAGGGACTTAGGCATGCAAGTGGGGATATT
ATTGTTTTTATGGACGCAGACGGCCAGCATAATCCTAAAGAAATACCAAAACTTCTAGAACCCATAATCAAGGGTAAGGC
CGATTTTGTAATAGGAAAAAGGATCATAAAAACCGGAAAAAGACCCCTACCTAGGAAGTTAAGCAACTTTATAACAACAA
CTTTAATTAGACTAAAGACCAAGCAGAGAATTGAGGACAGCCAAAGTGGATTTAGAGCAATAAGAAGAGAATTTGTCCCC
GAAATCACCAGTGATAGATATGAGGTAGAAACAGAAGTGTTAATTAAAGCCGTGAAAAAAGGTGCAAGAATTACAGAAGT
TCCAGTCTCAACTAGATATGACCTGAAAACAGGGAAATTTAGAGTTGAAGACATCATAAGATTTCTAATTGCCTTGATAA
AGTCATAA

Upstream 100 bases:

>100_bases
CTTCTTCAGCGCCTGCAAGGTGAGCAAAAACCCCCATTAATTTTATCTTCATTAACCCTCACCACTAAACCTTTATACTA
CATCAATTAAATTCTTTTCC

Downstream 100 bases:

>100_bases
TTTGAGAGGTGAATTACATGAGGGGAAAAATTAAAATTTTAGATATAGAAACAGGAAATCTTGCCATTTTTATAAATCCA
GAAGACGCAGAACAATGGCG

Product: dolichol-phosphate mannose synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MFGKYKVSVIIPAYNEEKRIGNVLARIPDFVDEVIVIDDGSSDATYEVAKRYTDKAIRLNKNMGKGAALREGLRHASGDI
IVFMDADGQHNPKEIPKLLEPIIKGKADFVIGKRIIKTGKRPLPRKLSNFITTTLIRLKTKQRIEDSQSGFRAIRREFVP
EITSDRYEVETEVLIKAVKKGARITEVPVSTRYDLKTGKFRVEDIIRFLIALIKS

Sequences:

>Translated_215_residues
MFGKYKVSVIIPAYNEEKRIGNVLARIPDFVDEVIVIDDGSSDATYEVAKRYTDKAIRLNKNMGKGAALREGLRHASGDI
IVFMDADGQHNPKEIPKLLEPIIKGKADFVIGKRIIKTGKRPLPRKLSNFITTTLIRLKTKQRIEDSQSGFRAIRREFVP
EITSDRYEVETEVLIKAVKKGARITEVPVSTRYDLKTGKFRVEDIIRFLIALIKS
>Mature_215_residues
MFGKYKVSVIIPAYNEEKRIGNVLARIPDFVDEVIVIDDGSSDATYEVAKRYTDKAIRLNKNMGKGAALREGLRHASGDI
IVFMDADGQHNPKEIPKLLEPIIKGKADFVIGKRIIKTGKRPLPRKLSNFITTTLIRLKTKQRIEDSQSGFRAIRREFVP
EITSDRYEVETEVLIKAVKKGARITEVPVSTRYDLKTGKFRVEDIIRFLIALIKS

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4503363, Length=209, Percent_Identity=32.5358851674641, Blast_Score=92, Evalue=3e-19,
Organism=Homo sapiens, GI7019323, Length=217, Percent_Identity=31.3364055299539, Blast_Score=81, Evalue=8e-16,
Organism=Escherichia coli, GI1788588, Length=196, Percent_Identity=30.1020408163265, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1788692, Length=168, Percent_Identity=31.547619047619, Blast_Score=70, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71999402, Length=207, Percent_Identity=33.3333333333333, Blast_Score=97, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI25146207, Length=216, Percent_Identity=27.7777777777778, Blast_Score=79, Evalue=3e-15,
Organism=Saccharomyces cerevisiae, GI6325029, Length=222, Percent_Identity=28.8288288288288, Blast_Score=89, Evalue=8e-19,
Organism=Drosophila melanogaster, GI24585265, Length=210, Percent_Identity=32.3809523809524, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24582769, Length=216, Percent_Identity=31.9444444444444, Blast_Score=81, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 24387; Mature: 24387

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGKYKVSVIIPAYNEEKRIGNVLARIPDFVDEVIVIDDGSSDATYEVAKRYTDKAIRLN
CCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHEEC
KNMGKGAALREGLRHASGDIIVFMDADGQHNPKEIPKLLEPIIKGKADFVIGKRIIKTGK
CCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
RPLPRKLSNFITTTLIRLKTKQRIEDSQSGFRAIRREFVPEITSDRYEVETEVLIKAVKK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHC
GARITEVPVSTRYDLKTGKFRVEDIIRFLIALIKS
CCCEEECCCCCCCCCCCCCEEHHHHHHHHHHHHCC
>Mature Secondary Structure
MFGKYKVSVIIPAYNEEKRIGNVLARIPDFVDEVIVIDDGSSDATYEVAKRYTDKAIRLN
CCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHEEC
KNMGKGAALREGLRHASGDIIVFMDADGQHNPKEIPKLLEPIIKGKADFVIGKRIIKTGK
CCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
RPLPRKLSNFITTTLIRLKTKQRIEDSQSGFRAIRREFVPEITSDRYEVETEVLIKAVKK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHC
GARITEVPVSTRYDLKTGKFRVEDIIRFLIALIKS
CCCEEECCCCCCCCCCCCCEEHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]