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The map label for this gene is nuoC [H]

Identifier: 18977815

GI number: 18977815

Start: 1352206

End: 1352730

Strand: Reverse

Name: nuoC [H]

Synonym: PF1443

Alternate gene names: 18977815

Gene position: 1352730-1352206 (Counterclockwise)

Preceding gene: 18977816

Following gene: 18977814

Centisome position: 70.89

GC content: 40.19

Gene sequence:

>525_bases
ATGACGTGGGAAAAGGGAGAAGAGATTGTCAAGCAGATACTAGAGAAAGCTCCATACGCAGAAGGAAAAGTAAGGAGAGA
AAGAAGGCTAGAATTTAGAGTTCCAGCAGATAAGATTAGAGACTTCCTTAGGATTATGAAGGAGTCGAACTTCCCATTAA
TGCTTCAGATAACCGCAGTTGACTGGCCAAAGGAGGGGGAAATAGAGCTTGTTTATCACTTAATTAACGTTGAGTTGGGA
ACTCATGCCATGGTAAAGACAAGAATTCCCAGAGATTTAGATAAAGCTAGAATGCCAACTGTTAAGGATATTTATCCAGC
AGCTGAAACATATGAGAGAGACGTTCATGACTTTTTCGGAGTTTACTTTGAGGGGAATGAAAAAATGGAGATGCCTTGGA
TATTAGATGATCCAGAGAGAGGACTATACCCCCACAGAAAGGACTTTGACATGCTTGCCTATGTGAAGAAGAAGTATAAG
ATTCTTGATAGATTCGACGAGGATAAGGATAAGTATGTGATCTGA

Upstream 100 bases:

>100_bases
ATAGAAAGAATCAGGATGAGCTATTGGGAGAGGGATGGAGAGAGAAAGAAGCTAGAAAATGGATTCCATGGTTAATGGAT
AAGAGGAAGGAGGTTAAAGA

Downstream 100 bases:

>100_bases
GGTGAGAATTATGGTTAGTCAAGAAGAACTCATTAGGGAAGCGAGACAAAATGGAATGGAGCTGTATCCAATTGATAAAG
ATACCTATGAGTTGTTCTTT

Product: NADH dehydrogenase subunit C

Products: NA

Alternate protein names: NADH dehydrogenase I subunit C; NDH-1 subunit C [H]

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MTWEKGEEIVKQILEKAPYAEGKVRRERRLEFRVPADKIRDFLRIMKESNFPLMLQITAVDWPKEGEIELVYHLINVELG
THAMVKTRIPRDLDKARMPTVKDIYPAAETYERDVHDFFGVYFEGNEKMEMPWILDDPERGLYPHRKDFDMLAYVKKKYK
ILDRFDEDKDKYVI

Sequences:

>Translated_174_residues
MTWEKGEEIVKQILEKAPYAEGKVRRERRLEFRVPADKIRDFLRIMKESNFPLMLQITAVDWPKEGEIELVYHLINVELG
THAMVKTRIPRDLDKARMPTVKDIYPAAETYERDVHDFFGVYFEGNEKMEMPWILDDPERGLYPHRKDFDMLAYVKKKYK
ILDRFDEDKDKYVI
>Mature_173_residues
TWEKGEEIVKQILEKAPYAEGKVRRERRLEFRVPADKIRDFLRIMKESNFPLMLQITAVDWPKEGEIELVYHLINVELGT
HAMVKTRIPRDLDKARMPTVKDIYPAAETYERDVHDFFGVYFEGNEKMEMPWILDDPERGLYPHRKDFDMLAYVKKKYKI
LDRFDEDKDKYVI

Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat

COG id: COG0852

COG function: function code C; NADH:ubiquinone oxidoreductase 27 kD subunit

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I 30 kDa subunit family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010218
- InterPro:   IPR001268
- InterPro:   IPR020396
- ProDom:   PD001581 [H]

Pfam domain/function: PF00329 Complex1_30kDa [H]

EC number: =1.6.99.5 [H]

Molecular weight: Translated: 20930; Mature: 20799

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTWEKGEEIVKQILEKAPYAEGKVRRERRLEFRVPADKIRDFLRIMKESNFPLMLQITAV
CCCCCHHHHHHHHHHHCCCCCCHHHHHHCCEEECCHHHHHHHHHHHHCCCCCEEEEEEEE
DWPKEGEIELVYHLINVELGTHAMVKTRIPRDLDKARMPTVKDIYPAAETYERDVHDFFG
CCCCCCCCEEEEEEEHHCCCCCHHHHHCCCCCHHHHCCCCHHHHCCCHHHHHHHHHHHHE
VYFEGNEKMEMPWILDDPERGLYPHRKDFDMLAYVKKKYKILDRFDEDKDKYVI
EEECCCCEEECCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
TWEKGEEIVKQILEKAPYAEGKVRRERRLEFRVPADKIRDFLRIMKESNFPLMLQITAV
CCCCHHHHHHHHHHHCCCCCCHHHHHHCCEEECCHHHHHHHHHHHHCCCCCEEEEEEEE
DWPKEGEIELVYHLINVELGTHAMVKTRIPRDLDKARMPTVKDIYPAAETYERDVHDFFG
CCCCCCCCEEEEEEEHHCCCCCHHHHHCCCCCHHHHCCCCHHHHCCCHHHHHHHHHHHHE
VYFEGNEKMEMPWILDDPERGLYPHRKDFDMLAYVKKKYKILDRFDEDKDKYVI
EEECCCCEEECCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA