| Definition | Pyrococcus furiosus DSM 3638, complete genome. |
|---|---|
| Accession | NC_003413 |
| Length | 1,908,256 |
Click here to switch to the map view.
The map label for this gene is 18977677
Identifier: 18977677
GI number: 18977677
Start: 1229839
End: 1232004
Strand: Reverse
Name: 18977677
Synonym: PF1305
Alternate gene names: NA
Gene position: 1232004-1229839 (Counterclockwise)
Preceding gene: 18977678
Following gene: 18977676
Centisome position: 64.56
GC content: 39.66
Gene sequence:
>2166_bases ATGAGGAAGGGATTCATATTTACCCTCGATGCTCTCCTAGCCTTACTATTAACAACTGTAGTTGTAGCTGGTACTTTTTC CCTACTGAGGACTGAGAGAGAGGTATATTCAAGTTATTTAGTCTCCCAATACCAGCATACTGCAGAGAATGTTCTTATTG TTCTTAGGACGGCACCATTAAACCAGCTAGTCTCGTCTGAAATAATTTTAAAGTGGAGTGAGAGTGGAATATTGGATTCC GAAATAGTCTCACCAGATATGTCACCCTTAGATATCGTTGCTACTTATTGGGCAACAGATCCCATATTTCCGGAAAAAGA TCTAAAGCATAAGGCTGAGATAATTTTAGGCTACATCCTTAACCAAACTTTGAAAGGATATAACTACGAACTCTTGATTA ATAATTACACGAGCCCATATCTGAGAAGAGTTGGAAGCAACTACTCTAAAGCTCCATATGTTTCAGAGGCCACTCTTCTA ATGAGTGGTTATGCATACAATCAGACCCCCAGGGGATATATGGCAAGGGCATACTTAACTAGAGCTACATCCGTTAGAGA AGACTTATTCGGATTTATGAGAGTTCTTGCTGAGGCCTGGGCAGGAATAGAATGGAAGAACACATTACATATATGGAGTA CCGAGTTATATGTAAATGCAACCATATACCTACCTATTGATAGCAAAATTTTAGAGGCAGATGGAAACTTTGTAAAAAGA AGTGACGAAAAAATGGAGGTCTATATTAATGGGAACAGAGTATCTCTAACCTCAGGGGCTCCAAATGCCCCCGACATAAA AGATTACCTCGTTCCTGGGGACAACGTGATAGAATTCAAATTTTATAATTCCTCTTCTTATTGGGAAATGGGTATAGGAA GCGGTACAACAATATATGTGAAATACCTAAGTAGCATTCCATATGTAGAAGACCCGGGAGTCATAAAAATTTATGACGTC ACCTCCCAATATACAGGGTTTATTTACTTGCTTGAAAACTTCGTCCCAGGAGATATTGAGAGTATAAATATGAAATTTAA AGTTAAAGGGGCTCAAGTAGTTAGGTTATACTATGGATTAGGAGAAAATCTTTGGCTAATTTCCGAGAAATACGTTGATC CCGCATCAATCGAAACTGTGGAGTTTACTGATGATGAAATACGAGAGGGATTATCTCGGATAGGAGTGTCGTATTCAAAT CTCTCCAAGATGGTCTTTGACTTTGTATTAGCTGTTGATGCCAAGTATGACGAGAACATTGGAAGATTTCTTTATGGAGG AGGTTATTACTTTATATGGTATAATGGAGAGTATTACCCTATAACCTGTCCTGACTGTGAAGGGGTAAGAACTCGCAGAC TCTATGGATATCCAGACTCCATAATTGAAATTAAGTACACGCCAAAAATCTTGAGAACTCCCTACAGCATTCCAGTATCA ATAAAGGTAGGCTACTCGGACATCAAATACTCTGATTACACTGGATGGGACTGTGAACTTGATACATACAAGAGTCTGAG CTTTAAGTATACCCTCCCTCCCTATGCAGAGCCCTGGTATGTAGATCTCTGGGTTGGCTATTGTTTTGCATCAAGCACTA CCCAGAGGCTAATTGAAAATAGATACGAGTTTTACAGCGGGCCAAATGGCGTTTATTCATTAAGAATTGCCTATACTAGG TTAAACGAGCAGTATATGATGATTCCAAATCAAGAAAACACATTCACAGCAACACTTGATGTTGGAGTAGACGAAGGGGG AACATCTTATAGAAAGGGGGCTACTAGGGGAGTAGTAAAGTATTTCCTAAATGCGTATGCTGGCTATGGAAAGGTCTTTC CAAAGTATATACGGGAAGGATGTGGGGGATATAATATAACATACCACTGGACTGATGGCATAAACGTTTATGAGGATACA ATAACAGCAGGTGAAGAGCCTTATTGCCAGTTAAGTGCAGAAGAACTCCTCGAAGGAAGCAAACAATATGCCGTAGATGA CGCCATAATTAGACTCTTCAAGAATCTTGGAGGGTACGGGACTAGGGACTCACCAATTACAGTTAAGCTCCCAGAAAATG TGAATATAGAATTTGCGTCAATGGGAGAGATTCCAGGTTTATTCGAGCCAATTCAAATAACCCTTAGAGTATGGAGGGAG AGTTAA
Upstream 100 bases:
>100_bases ACAGAGGTTCAGTAAAGATAGAAATAATTCCAGATATTAAGTGGGCGCTTGCTCCAAAATTAGACGCTGCTATAATAAAA CTGTGGGTGTGGGATGATTC
Downstream 100 bases:
>100_bases TGAGGAGAGGGTTCATCATAAATTCTACACTCTTAATTCTAATTATCCCTCTTCTTCTATTGGCAGCAACATATGCCGAG ATATCCTCCTATGTAATGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 721; Mature: 721
Protein sequence:
>721_residues MRKGFIFTLDALLALLLTTVVVAGTFSLLRTEREVYSSYLVSQYQHTAENVLIVLRTAPLNQLVSSEIILKWSESGILDS EIVSPDMSPLDIVATYWATDPIFPEKDLKHKAEIILGYILNQTLKGYNYELLINNYTSPYLRRVGSNYSKAPYVSEATLL MSGYAYNQTPRGYMARAYLTRATSVREDLFGFMRVLAEAWAGIEWKNTLHIWSTELYVNATIYLPIDSKILEADGNFVKR SDEKMEVYINGNRVSLTSGAPNAPDIKDYLVPGDNVIEFKFYNSSSYWEMGIGSGTTIYVKYLSSIPYVEDPGVIKIYDV TSQYTGFIYLLENFVPGDIESINMKFKVKGAQVVRLYYGLGENLWLISEKYVDPASIETVEFTDDEIREGLSRIGVSYSN LSKMVFDFVLAVDAKYDENIGRFLYGGGYYFIWYNGEYYPITCPDCEGVRTRRLYGYPDSIIEIKYTPKILRTPYSIPVS IKVGYSDIKYSDYTGWDCELDTYKSLSFKYTLPPYAEPWYVDLWVGYCFASSTTQRLIENRYEFYSGPNGVYSLRIAYTR LNEQYMMIPNQENTFTATLDVGVDEGGTSYRKGATRGVVKYFLNAYAGYGKVFPKYIREGCGGYNITYHWTDGINVYEDT ITAGEEPYCQLSAEELLEGSKQYAVDDAIIRLFKNLGGYGTRDSPITVKLPENVNIEFASMGEIPGLFEPIQITLRVWRE S
Sequences:
>Translated_721_residues MRKGFIFTLDALLALLLTTVVVAGTFSLLRTEREVYSSYLVSQYQHTAENVLIVLRTAPLNQLVSSEIILKWSESGILDS EIVSPDMSPLDIVATYWATDPIFPEKDLKHKAEIILGYILNQTLKGYNYELLINNYTSPYLRRVGSNYSKAPYVSEATLL MSGYAYNQTPRGYMARAYLTRATSVREDLFGFMRVLAEAWAGIEWKNTLHIWSTELYVNATIYLPIDSKILEADGNFVKR SDEKMEVYINGNRVSLTSGAPNAPDIKDYLVPGDNVIEFKFYNSSSYWEMGIGSGTTIYVKYLSSIPYVEDPGVIKIYDV TSQYTGFIYLLENFVPGDIESINMKFKVKGAQVVRLYYGLGENLWLISEKYVDPASIETVEFTDDEIREGLSRIGVSYSN LSKMVFDFVLAVDAKYDENIGRFLYGGGYYFIWYNGEYYPITCPDCEGVRTRRLYGYPDSIIEIKYTPKILRTPYSIPVS IKVGYSDIKYSDYTGWDCELDTYKSLSFKYTLPPYAEPWYVDLWVGYCFASSTTQRLIENRYEFYSGPNGVYSLRIAYTR LNEQYMMIPNQENTFTATLDVGVDEGGTSYRKGATRGVVKYFLNAYAGYGKVFPKYIREGCGGYNITYHWTDGINVYEDT ITAGEEPYCQLSAEELLEGSKQYAVDDAIIRLFKNLGGYGTRDSPITVKLPENVNIEFASMGEIPGLFEPIQITLRVWRE S >Mature_721_residues MRKGFIFTLDALLALLLTTVVVAGTFSLLRTEREVYSSYLVSQYQHTAENVLIVLRTAPLNQLVSSEIILKWSESGILDS EIVSPDMSPLDIVATYWATDPIFPEKDLKHKAEIILGYILNQTLKGYNYELLINNYTSPYLRRVGSNYSKAPYVSEATLL MSGYAYNQTPRGYMARAYLTRATSVREDLFGFMRVLAEAWAGIEWKNTLHIWSTELYVNATIYLPIDSKILEADGNFVKR SDEKMEVYINGNRVSLTSGAPNAPDIKDYLVPGDNVIEFKFYNSSSYWEMGIGSGTTIYVKYLSSIPYVEDPGVIKIYDV TSQYTGFIYLLENFVPGDIESINMKFKVKGAQVVRLYYGLGENLWLISEKYVDPASIETVEFTDDEIREGLSRIGVSYSN LSKMVFDFVLAVDAKYDENIGRFLYGGGYYFIWYNGEYYPITCPDCEGVRTRRLYGYPDSIIEIKYTPKILRTPYSIPVS IKVGYSDIKYSDYTGWDCELDTYKSLSFKYTLPPYAEPWYVDLWVGYCFASSTTQRLIENRYEFYSGPNGVYSLRIAYTR LNEQYMMIPNQENTFTATLDVGVDEGGTSYRKGATRGVVKYFLNAYAGYGKVFPKYIREGCGGYNITYHWTDGINVYEDT ITAGEEPYCQLSAEELLEGSKQYAVDDAIIRLFKNLGGYGTRDSPITVKLPENVNIEFASMGEIPGLFEPIQITLRVWRE S
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 82168; Mature: 82168
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKGFIFTLDALLALLLTTVVVAGTFSLLRTEREVYSSYLVSQYQHTAENVLIVLRTAPL CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCH NQLVSSEIILKWSESGILDSEIVSPDMSPLDIVATYWATDPIFPEKDLKHKAEIILGYIL HHHHCCEEEEEECCCCCCCHHHCCCCCCCHHEEEEEECCCCCCCCHHHHHHHHHHHHHHH NQTLKGYNYELLINNYTSPYLRRVGSNYSKAPYVSEATLLMSGYAYNQTPRGYMARAYLT HHHHCCCCEEEEEECCCCHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHH RATSVREDLFGFMRVLAEAWAGIEWKNTLHIWSTELYVNATIYLPIDSKILEADGNFVKR HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEEEEECCCEEEECCCCEEEC SDEKMEVYINGNRVSLTSGAPNAPDIKDYLVPGDNVIEFKFYNSSSYWEMGIGSGTTIYV CCCEEEEEEECCEEEECCCCCCCCCCHHEECCCCCEEEEEEECCCCEEEEECCCCCEEEE KYLSSIPYVEDPGVIKIYDVTSQYTGFIYLLENFVPGDIESINMKFKVKGAQVVRLYYGL EEHHCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCEEEEEEEEECCCEEEEEEECC GENLWLISEKYVDPASIETVEFTDDEIREGLSRIGVSYSNLSKMVFDFVLAVDAKYDENI CCCEEEEEECCCCCCCEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCC GRFLYGGGYYFIWYNGEYYPITCPDCEGVRTRRLYGYPDSIIEIKYTPKILRTPYSIPVS CCEEECCEEEEEEECCEEEEEECCCCCCCCEEEEECCCCCEEEEEECCHHHCCCCCCEEE IKVGYSDIKYSDYTGWDCELDTYKSLSFKYTLPPYAEPWYVDLWVGYCFASSTTQRLIEN EEECCCCCEECCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEHHHCCHHHHHHHHH RYEFYSGPNGVYSLRIAYTRLNEQYMMIPNQENTFTATLDVGVDEGGTSYRKGATRGVVK HHHHCCCCCCEEEEEEEEEEECCEEEEECCCCCCEEEEEEECCCCCCCCHHCCCHHHHHH YFLNAYAGYGKVFPKYIREGCGGYNITYHWTDGINVYEDTITAGEEPYCQLSAEELLEGS HHHHHHCCCHHHHHHHHHHCCCCCEEEEEECCCCEEEECCCCCCCCCCEEECHHHHHCCC KQYAVDDAIIRLFKNLGGYGTRDSPITVKLPENVNIEFASMGEIPGLFEPIQITLRVWRE HHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEEECCCCCCCCCHHEEEEEEECC S C >Mature Secondary Structure MRKGFIFTLDALLALLLTTVVVAGTFSLLRTEREVYSSYLVSQYQHTAENVLIVLRTAPL CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCH NQLVSSEIILKWSESGILDSEIVSPDMSPLDIVATYWATDPIFPEKDLKHKAEIILGYIL HHHHCCEEEEEECCCCCCCHHHCCCCCCCHHEEEEEECCCCCCCCHHHHHHHHHHHHHHH NQTLKGYNYELLINNYTSPYLRRVGSNYSKAPYVSEATLLMSGYAYNQTPRGYMARAYLT HHHHCCCCEEEEEECCCCHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHH RATSVREDLFGFMRVLAEAWAGIEWKNTLHIWSTELYVNATIYLPIDSKILEADGNFVKR HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEEEEECCCEEEECCCCEEEC SDEKMEVYINGNRVSLTSGAPNAPDIKDYLVPGDNVIEFKFYNSSSYWEMGIGSGTTIYV CCCEEEEEEECCEEEECCCCCCCCCCHHEECCCCCEEEEEEECCCCEEEEECCCCCEEEE KYLSSIPYVEDPGVIKIYDVTSQYTGFIYLLENFVPGDIESINMKFKVKGAQVVRLYYGL EEHHCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCEEEEEEEEECCCEEEEEEECC GENLWLISEKYVDPASIETVEFTDDEIREGLSRIGVSYSNLSKMVFDFVLAVDAKYDENI CCCEEEEEECCCCCCCEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCC GRFLYGGGYYFIWYNGEYYPITCPDCEGVRTRRLYGYPDSIIEIKYTPKILRTPYSIPVS CCEEECCEEEEEEECCEEEEEECCCCCCCCEEEEECCCCCEEEEEECCHHHCCCCCCEEE IKVGYSDIKYSDYTGWDCELDTYKSLSFKYTLPPYAEPWYVDLWVGYCFASSTTQRLIEN EEECCCCCEECCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEHHHCCHHHHHHHHH RYEFYSGPNGVYSLRIAYTRLNEQYMMIPNQENTFTATLDVGVDEGGTSYRKGATRGVVK HHHHCCCCCCEEEEEEEEEEECCEEEEECCCCCCEEEEEEECCCCCCCCHHCCCHHHHHH YFLNAYAGYGKVFPKYIREGCGGYNITYHWTDGINVYEDTITAGEEPYCQLSAEELLEGS HHHHHHCCCHHHHHHHHHHCCCCCEEEEEECCCCEEEECCCCCCCCCCEEECHHHHHCCC KQYAVDDAIIRLFKNLGGYGTRDSPITVKLPENVNIEFASMGEIPGLFEPIQITLRVWRE HHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEEECCCCCCCCCHHEEEEEEECC S C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA