| Definition | Pyrococcus furiosus DSM 3638, complete genome. |
|---|---|
| Accession | NC_003413 |
| Length | 1,908,256 |
Click here to switch to the map view.
The map label for this gene is 18977678
Identifier: 18977678
GI number: 18977678
Start: 1232001
End: 1233455
Strand: Reverse
Name: 18977678
Synonym: PF1306
Alternate gene names: NA
Gene position: 1233455-1232001 (Counterclockwise)
Preceding gene: 18977679
Following gene: 18977677
Centisome position: 64.64
GC content: 39.52
Gene sequence:
>1455_bases GTGGTGGGAGCGTTGAGGGGTCAAGTATTTTCCATGGATGCACTGGTCTCAATGGTAATTGTAGTTATGATAATTGGAAC GGTCTCTGCTACATCGGAGAGCATAAAGAATGAGATAGTTTCACTTATCGATTGGTATGAGAGAGCTAACGTAGCTGAGA ATATGTTGGATGTTCTTTTAAAGAGCCCAGGTGAGCCCGAAGATTGGCATCTAGATATCTCAAAGTTGGAAGTTGTTGGA CTTAGAAGTTCTAACAGGAGCTACGCTCTAGATTATCTCAAAGTTATGAAGCTTTCTTCTCCCGAGGTTATTGGAAAAGC CATAGATATTTCCAACGGGAAAGACTTCATGCTTGAGGTCTTTCTCTCAAGATATAATGTTAGCATTAACGGGACTTTTC CCAGAGTATACCTTGCAAATGTTACTTTTGGACTTGATAATCCTTCTGGTGGGGCCAATTTTAGAGTGGAAAGCCCAGAT GGAAGAGACTTTACCGTTAGCTACATTCTCTTAAGAAGATCTGACGGAACCGAATATGAAAATGAAGAAGTCTGTAAATT AGTAAAGGGAAACGTACTAAAGCTTGGTAATAAAAATAATAAAAAAGAGGATGAAAGTTATATAAATTATATGAAGATAA TAACAACAGAAAGCACTTCAATAGATGATAAAAAAGACGATAGGCCTCCTATCATTGTACCTCCGGGAACTGTTATAGAG ATATTCATTCTCAATAAAACAAGTGACCTTCAAATTAACTTCAATCCATGCTGGCAGACGTTAAAGATTACTGGACAGGG AAACGTCGTAGTCACTGTTTCCGCATACGACAGCACAGTTCCAAATATCCTAGGAAACTACACATTTGCTCAAGTTGTTG AACTTCAGGATATTCCTACTTTGTCCTTTAGCGTGATAAACGGAACTGTTATCAACGATAAAATTATAATCGAGGCATCA ATGGAGCGTTCTCCCTGGGTAGAAGTGGAAAAGAGAACAGTGAGCATTGAGACCTTTCTCTACGACCTCTCAGCAAATCC ATCCTCTGAAGTCCCTATGATCTATGGAGTTCTTAGATCTCAACTTCCTGCGGGCTCTTACCTTAAGATTACAGTTCCCG ATCTTCCAGGAAACATGTCCTTTGTAGTGCTATCAAAATCCGATATGAGTGGACTTATGATATACAGAATGCCTTTTGAA AACATCGTTAGAGCGGTTGTAGTTCATGGAAACACTTCAATTCACTATACTGGAAACAGTACTTCGATATCAATACCCCT AAAAGATCTCTTTGGCAATCCCCAAGAAGGAGATACAGTTGCAATGTGGCTCTACTCTTTGGAGGGATGGGACAGAGGTT CAGTAAAGATAGAAATAATTCCAGATATTAAGTGGGCGCTTGCTCCAAAATTAGACGCTGCTATAATAAAACTGTGGGTG TGGGATGATTCATGA
Upstream 100 bases:
>100_bases GAGAAAGATTGAGGAAGCGTGGATCAGTGTCTTGCAAGAGCATGGATACATATAGATGAATCAAAATCGTTAAATAAGCC ATACACAATATAATTATGAA
Downstream 100 bases:
>100_bases GGAAGGGATTCATATTTACCCTCGATGCTCTCCTAGCCTTACTATTAACAACTGTAGTTGTAGCTGGTACTTTTTCCCTA CTGAGGACTGAGAGAGAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 484; Mature: 484
Protein sequence:
>484_residues MVGALRGQVFSMDALVSMVIVVMIIGTVSATSESIKNEIVSLIDWYERANVAENMLDVLLKSPGEPEDWHLDISKLEVVG LRSSNRSYALDYLKVMKLSSPEVIGKAIDISNGKDFMLEVFLSRYNVSINGTFPRVYLANVTFGLDNPSGGANFRVESPD GRDFTVSYILLRRSDGTEYENEEVCKLVKGNVLKLGNKNNKKEDESYINYMKIITTESTSIDDKKDDRPPIIVPPGTVIE IFILNKTSDLQINFNPCWQTLKITGQGNVVVTVSAYDSTVPNILGNYTFAQVVELQDIPTLSFSVINGTVINDKIIIEAS MERSPWVEVEKRTVSIETFLYDLSANPSSEVPMIYGVLRSQLPAGSYLKITVPDLPGNMSFVVLSKSDMSGLMIYRMPFE NIVRAVVVHGNTSIHYTGNSTSISIPLKDLFGNPQEGDTVAMWLYSLEGWDRGSVKIEIIPDIKWALAPKLDAAIIKLWV WDDS
Sequences:
>Translated_484_residues MVGALRGQVFSMDALVSMVIVVMIIGTVSATSESIKNEIVSLIDWYERANVAENMLDVLLKSPGEPEDWHLDISKLEVVG LRSSNRSYALDYLKVMKLSSPEVIGKAIDISNGKDFMLEVFLSRYNVSINGTFPRVYLANVTFGLDNPSGGANFRVESPD GRDFTVSYILLRRSDGTEYENEEVCKLVKGNVLKLGNKNNKKEDESYINYMKIITTESTSIDDKKDDRPPIIVPPGTVIE IFILNKTSDLQINFNPCWQTLKITGQGNVVVTVSAYDSTVPNILGNYTFAQVVELQDIPTLSFSVINGTVINDKIIIEAS MERSPWVEVEKRTVSIETFLYDLSANPSSEVPMIYGVLRSQLPAGSYLKITVPDLPGNMSFVVLSKSDMSGLMIYRMPFE NIVRAVVVHGNTSIHYTGNSTSISIPLKDLFGNPQEGDTVAMWLYSLEGWDRGSVKIEIIPDIKWALAPKLDAAIIKLWV WDDS >Mature_484_residues MVGALRGQVFSMDALVSMVIVVMIIGTVSATSESIKNEIVSLIDWYERANVAENMLDVLLKSPGEPEDWHLDISKLEVVG LRSSNRSYALDYLKVMKLSSPEVIGKAIDISNGKDFMLEVFLSRYNVSINGTFPRVYLANVTFGLDNPSGGANFRVESPD GRDFTVSYILLRRSDGTEYENEEVCKLVKGNVLKLGNKNNKKEDESYINYMKIITTESTSIDDKKDDRPPIIVPPGTVIE IFILNKTSDLQINFNPCWQTLKITGQGNVVVTVSAYDSTVPNILGNYTFAQVVELQDIPTLSFSVINGTVINDKIIIEAS MERSPWVEVEKRTVSIETFLYDLSANPSSEVPMIYGVLRSQLPAGSYLKITVPDLPGNMSFVVLSKSDMSGLMIYRMPFE NIVRAVVVHGNTSIHYTGNSTSISIPLKDLFGNPQEGDTVAMWLYSLEGWDRGSVKIEIIPDIKWALAPKLDAAIIKLWV WDDS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53811; Mature: 53811
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGALRGQVFSMDALVSMVIVVMIIGTVSATSESIKNEIVSLIDWYERANVAENMLDVLL CCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KSPGEPEDWHLDISKLEVVGLRSSNRSYALDYLKVMKLSSPEVIGKAIDISNGKDFMLEV HCCCCCCCEEEEEEEEEEEEEECCCCCHHHHHHHHHCCCCCHHEEEEEECCCCCHHHHHH FLSRYNVSINGTFPRVYLANVTFGLDNPSGGANFRVESPDGRDFTVSYILLRRSDGTEYE HHHHHEEEECCCCCEEEEEEEEEECCCCCCCCEEEEECCCCCEEEEEEEEEECCCCCCCC NEEVCKLVKGNVLKLGNKNNKKEDESYINYMKIITTESTSIDDKKDDRPPIIVPPGTVIE CHHHHHHHCCCEEEECCCCCCCCHHHHEEEEEEEEECCCCCCCCCCCCCCEEECCCCEEE IFILNKTSDLQINFNPCWQTLKITGQGNVVVTVSAYDSTVPNILGNYTFAQVVELQDIPT EEEEECCCCEEEEECCCCEEEEEECCCCEEEEEECCCCCCHHHHCCCCHHEEEECCCCCC LSFSVINGTVINDKIIIEASMERSPWVEVEKRTVSIETFLYDLSANPSSEVPMIYGVLRS EEEEEEECEEECCEEEEEECCCCCCCEEEEEEEEEEEEEEEEECCCCCCCCCHHHHHHHH QLPAGSYLKITVPDLPGNMSFVVLSKSDMSGLMIYRMPFENIVRAVVVHGNTSIHYTGNS CCCCCCEEEEECCCCCCCEEEEEEECCCCCCEEEEECCHHHHEEEEEEECCCEEEECCCC TSISIPLKDLFGNPQEGDTVAMWLYSLEGWDRGSVKIEIIPDIKWALAPKLDAAIIKLWV CEEEEEHHHHCCCCCCCCEEEEEEEEECCCCCCCEEEEEECCCCEECCCCCCEEEEEEEE WDDS EECC >Mature Secondary Structure MVGALRGQVFSMDALVSMVIVVMIIGTVSATSESIKNEIVSLIDWYERANVAENMLDVLL CCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KSPGEPEDWHLDISKLEVVGLRSSNRSYALDYLKVMKLSSPEVIGKAIDISNGKDFMLEV HCCCCCCCEEEEEEEEEEEEEECCCCCHHHHHHHHHCCCCCHHEEEEEECCCCCHHHHHH FLSRYNVSINGTFPRVYLANVTFGLDNPSGGANFRVESPDGRDFTVSYILLRRSDGTEYE HHHHHEEEECCCCCEEEEEEEEEECCCCCCCCEEEEECCCCCEEEEEEEEEECCCCCCCC NEEVCKLVKGNVLKLGNKNNKKEDESYINYMKIITTESTSIDDKKDDRPPIIVPPGTVIE CHHHHHHHCCCEEEECCCCCCCCHHHHEEEEEEEEECCCCCCCCCCCCCCEEECCCCEEE IFILNKTSDLQINFNPCWQTLKITGQGNVVVTVSAYDSTVPNILGNYTFAQVVELQDIPT EEEEECCCCEEEEECCCCEEEEEECCCCEEEEEECCCCCCHHHHCCCCHHEEEECCCCCC LSFSVINGTVINDKIIIEASMERSPWVEVEKRTVSIETFLYDLSANPSSEVPMIYGVLRS EEEEEEECEEECCEEEEEECCCCCCCEEEEEEEEEEEEEEEEECCCCCCCCCHHHHHHHH QLPAGSYLKITVPDLPGNMSFVVLSKSDMSGLMIYRMPFENIVRAVVVHGNTSIHYTGNS CCCCCCEEEEECCCCCCCEEEEEEECCCCCCEEEEECCHHHHEEEEEEECCCEEEECCCC TSISIPLKDLFGNPQEGDTVAMWLYSLEGWDRGSVKIEIIPDIKWALAPKLDAAIIKLWV CEEEEEHHHHCCCCCCCCEEEEEEEEECCCCCCCEEEEEECCCCEECCCCCCEEEEEEEE WDDS EECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA