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The map label for this gene is sufB [H]

Identifier: 18977657

GI number: 18977657

Start: 1211743

End: 1212834

Strand: Reverse

Name: sufB [H]

Synonym: PF1285

Alternate gene names: 18977657

Gene position: 1212834-1211743 (Counterclockwise)

Preceding gene: 18977658

Following gene: 33359556

Centisome position: 63.56

GC content: 38.74

Gene sequence:

>1092_bases
ATGAAAGTAAATCTAGAAGGATTGACCTACCAGAAGTATGGTGATAGCCCAACAATCAAGAGCTATACTAAATGGCATTT
ATTCGAAGAAAATTCTCCTCTTACACTCCCAACTCAAGCTCCTGGGAAAAAATTGGGAATAAGGGGACATATAATTTTTT
CTGGTAGTGACGTAGAGTTTAATCTACCTAACAACATTGAAGTGGGAGAAGGGAGCCTAAATTTATCTCACTCCCAGGAG
TCTAGAATTCTAGGATTTCATTTTTATGCCCTGAAGAAAGCTTACAAGATAAGAATAGAGAGAGACTTAAGGGAGCCACT
GATTATAGTTTCCCATCTATCAGAAAAAGCATTCGTCAGTCATCATTTAAGCATTGAAATTGAAAAGGCCTCTGCACCAA
TTATCCTCTACGACATATCCGAGAAGGGGACAAAATCTTTAGTAGTGGAGCTGGCAATAAGAGAGGGGAGTTCTGAAATA
TTAACAATTGGAAACCATTCCTCTCTATCTCACTTCCTACTGAGAGCAATCTTGGACAGAAACTCAACGCTTAAAACTTT
CACCATAATAAAAGGAGGAACTATGAGTCATCACAGAGAAGACTACTCCCTAGAAGGAAAGGAAAGCAAACTTGTTCTTG
CAGGATTGCCTGTTGGCATAGGCTCCGCGGTAGACTATATTACAAATATTGTCCATTATGGAAAGTCCAGTAAAAGCAAG
ATACGAGTACACGGATTTTCCTATAAAAATGGATGGGTGGTCCATAGGGGAACATCAAAAATCTCTGAGGAAGCAGAAGG
AGCAAGTAGTGAGGTTTCTTCCCATGTGATAATTATGGATAGAGGTTCCCTTGGAGTTAGTGTTCCTATGCTAGAAGTGG
ACACTGGGGACATTGAAAATGCATCGCATTCATCAAGTGTTACACAAATAGATGAGGAAGCATTATTTTACCTGAGATCA
CGAGGACTAAATAGAGAGGAAGCCCTTCGATTATTAATATATGGAATTGGAGAAACTTTAACTAGCAATTTGTATTTCTT
AAAAGGAAAAGCTAGAAGTACAGTAATCGACGTAATACAAGCTCTCATTTAG

Upstream 100 bases:

>100_bases
GTTTTATCTCTGAAGTTCTTGAGGATCTGCCTTTTGAATATGTGGAAGTTTTGAAGAAAGTTATCGAGCTAGAATTTAGC
GAGATTGGAGGTGTTGGTTG

Downstream 100 bases:

>100_bases
TCATTGTTTTTAGAGTGGCATACATTAATAATCAAAAGGAAGCTGAACCTCTTACAACTTTGAAAAAGGTTTATAAGGGA
AACTTAGAAAATAAAAATGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MKVNLEGLTYQKYGDSPTIKSYTKWHLFEENSPLTLPTQAPGKKLGIRGHIIFSGSDVEFNLPNNIEVGEGSLNLSHSQE
SRILGFHFYALKKAYKIRIERDLREPLIIVSHLSEKAFVSHHLSIEIEKASAPIILYDISEKGTKSLVVELAIREGSSEI
LTIGNHSSLSHFLLRAILDRNSTLKTFTIIKGGTMSHHREDYSLEGKESKLVLAGLPVGIGSAVDYITNIVHYGKSSKSK
IRVHGFSYKNGWVVHRGTSKISEEAEGASSEVSSHVIIMDRGSLGVSVPMLEVDTGDIENASHSSSVTQIDEEALFYLRS
RGLNREEALRLLIYGIGETLTSNLYFLKGKARSTVIDVIQALI

Sequences:

>Translated_363_residues
MKVNLEGLTYQKYGDSPTIKSYTKWHLFEENSPLTLPTQAPGKKLGIRGHIIFSGSDVEFNLPNNIEVGEGSLNLSHSQE
SRILGFHFYALKKAYKIRIERDLREPLIIVSHLSEKAFVSHHLSIEIEKASAPIILYDISEKGTKSLVVELAIREGSSEI
LTIGNHSSLSHFLLRAILDRNSTLKTFTIIKGGTMSHHREDYSLEGKESKLVLAGLPVGIGSAVDYITNIVHYGKSSKSK
IRVHGFSYKNGWVVHRGTSKISEEAEGASSEVSSHVIIMDRGSLGVSVPMLEVDTGDIENASHSSSVTQIDEEALFYLRS
RGLNREEALRLLIYGIGETLTSNLYFLKGKARSTVIDVIQALI
>Mature_363_residues
MKVNLEGLTYQKYGDSPTIKSYTKWHLFEENSPLTLPTQAPGKKLGIRGHIIFSGSDVEFNLPNNIEVGEGSLNLSHSQE
SRILGFHFYALKKAYKIRIERDLREPLIIVSHLSEKAFVSHHLSIEIEKASAPIILYDISEKGTKSLVVELAIREGSSEI
LTIGNHSSLSHFLLRAILDRNSTLKTFTIIKGGTMSHHREDYSLEGKESKLVLAGLPVGIGSAVDYITNIVHYGKSSKSK
IRVHGFSYKNGWVVHRGTSKISEEAEGASSEVSSHVIIMDRGSLGVSVPMLEVDTGDIENASHSSSVTQIDEEALFYLRS
RGLNREEALRLLIYGIGETLTSNLYFLKGKARSTVIDVIQALI

Specific function: The sufBCD complex acts synergistically with sufE to stimulate the cysteine desulfurase activity of sufS. The sufBCD complex contributes to the assembly or repair of oxygen-labile iron-sulfur clusters under oxidative stress. May facilitate iron uptake fro

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI1787971, Length=169, Percent_Identity=24.8520710059172, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 40160; Mature: 40160

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVNLEGLTYQKYGDSPTIKSYTKWHLFEENSPLTLPTQAPGKKLGIRGHIIFSGSDVEF
CEEECCCEEEEECCCCCCCCCCEEEEEEECCCCEECCCCCCCCEECEEEEEEEECCCEEE
NLPNNIEVGEGSLNLSHSQESRILGFHFYALKKAYKIRIERDLREPLIIVSHLSEKAFVS
ECCCCCEECCCCEEECCCCCCCEEEEEHHHHHHHEEEEEEHHCCCCEEEEECCCCHHHEE
HHLSIEIEKASAPIILYDISEKGTKSLVVELAIREGSSEILTIGNHSSLSHFLLRAILDR
EEEEEEEECCCCCEEEEECCCCCCCEEEEEEEEECCCCCEEEECCCCHHHHHHHHHHHCC
NSTLKTFTIIKGGTMSHHREDYSLEGKESKLVLAGLPVGIGSAVDYITNIVHYGKSSKSK
CCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCE
IRVHGFSYKNGWVVHRGTSKISEEAEGASSEVSSHVIIMDRGSLGVSVPMLEVDTGDIEN
EEEEEEEECCCEEEECCCHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCC
ASHSSSVTQIDEEALFYLRSRGLNREEALRLLIYGIGETLTSNLYFLKGKARSTVIDVIQ
CCCCCCHHHHHHHHHHHHHHCCCCHHHHHEEEEEECCHHHHCCEEEEECCCHHHHHHHHH
ALI
HHC
>Mature Secondary Structure
MKVNLEGLTYQKYGDSPTIKSYTKWHLFEENSPLTLPTQAPGKKLGIRGHIIFSGSDVEF
CEEECCCEEEEECCCCCCCCCCEEEEEEECCCCEECCCCCCCCEECEEEEEEEECCCEEE
NLPNNIEVGEGSLNLSHSQESRILGFHFYALKKAYKIRIERDLREPLIIVSHLSEKAFVS
ECCCCCEECCCCEEECCCCCCCEEEEEHHHHHHHEEEEEEHHCCCCEEEEECCCCHHHEE
HHLSIEIEKASAPIILYDISEKGTKSLVVELAIREGSSEILTIGNHSSLSHFLLRAILDR
EEEEEEEECCCCCEEEEECCCCCCCEEEEEEEEECCCCCEEEECCCCHHHHHHHHHHHCC
NSTLKTFTIIKGGTMSHHREDYSLEGKESKLVLAGLPVGIGSAVDYITNIVHYGKSSKSK
CCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCE
IRVHGFSYKNGWVVHRGTSKISEEAEGASSEVSSHVIIMDRGSLGVSVPMLEVDTGDIEN
EEEEEEEECCCEEEECCCHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCC
ASHSSSVTQIDEEALFYLRSRGLNREEALRLLIYGIGETLTSNLYFLKGKARSTVIDVIQ
CCCCCCHHHHHHHHHHHHHHCCCCHHHHHEEEEEECCHHHHCCEEEEECCCHHHHHHHHH
ALI
HHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]