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The map label for this gene is sufB [C]

Identifier: 18977658

GI number: 18977658

Start: 1212834

End: 1214261

Strand: Reverse

Name: sufB [C]

Synonym: PF1286

Alternate gene names: 18977658

Gene position: 1214261-1212834 (Counterclockwise)

Preceding gene: 18977659

Following gene: 18977657

Centisome position: 63.63

GC content: 38.1

Gene sequence:

>1428_bases
ATGAAGAGTAAAAGTCACTTAGAAGAAATTCTAAAAGCGGGATCCTTAGAAGAAATCTTAGGTACTGCCGTTCCGTATCC
TAAAGAGATTGAGATAAAGGGGAAAATTAGTAGAGATACTATTGAAGAGTTATCTAAAGTTAAAAATGAACCCTCCTGGA
TGTTAAGGCATCGATTAAAAGCCTTAGAACTCTTTGAAAAATTGCCCATGCCGAAATGGGTCGTTGGAATTGAAGAACTT
GATTTGGATAACCTAGTATTATACACCAAACCTGAAATTCAAAATGAAGTAAGAGATTGGGATGATCTTCCTGAAAACAT
TAGGAAGACGTTTGAAAGGCTAAACATTCCAGAGATAGAAAAAAGGTTTCTTTCCGGATTAACCGCTGTATTTGATAGTG
AGAGTATATACTCAAAATTGAAGGCAGAGTTCGAGAAAAAGGGTATAATTATGGTGCCAATGGAGGAGGCTGTAAGAAAG
TATCCTGACTTAGTCAAGAGATACTTTGGAAAAGTCTTTCCTCCTGGGGATCATAAATTTGCAGCCCTTCACCATGCTCT
CTGGAGTGGTGGGGTCTTTGTATATGTTCCAAAGGGAGTAAAGATACCATTTCCAATTGAGGCGTTCTTTGTAATAGGTT
CTGCGTTAGAAGGGCAATTCGAGCACACATTAATAATTGCAGATGAGGGAAGTTATCTCCATTTCATTGAAGGATGTAGT
GCTCCAATGTACAAGGGATTTTCATTCCATGATGGAATGGTTGAAATCTATGCCCATAAAGATGCAACTGTTAAGTTCAC
TACGATCCAAAACTGGAGCAGAAATGTGATTAACTTCAATAATAAACGTGCAATAATCGAAGATAATGCATACGTAGAGT
GGATTGAGGGAAGCATAGGAAGTAGGATAACTTATACATACCCATCGAGCGTACTTAAAGGCCCTGGAGCAAAAACTACC
CAATATGTAGTTTCCCTTAGTAATGGACCTTATTTGAAAGATACTGGAGCAAAAACTTGGCATTTAGCTCCTAATACTAG
CTCAAAGATAGTTTCTAAGAGTATAAGTGCTAACGGAGGCATTAACATATATAGGGGTCTTGTGAGGATAATGAAAGGCG
CAATAAACTCAACAGCAACTGTTTCTTGTGATTCACTAATATTGGACAAAGAGAGCAAGGCCTATACATATCCCCACAAT
CAGAACGATGAGCCAACTGCAAGCATAATACATGAAGCAACTACAGGGAAATTAAGCGAGGACAAGCTCTTTTACTTAAA
GGCTAGAGGAATTAAAGAAGAAGAAGCAAAGAGTCTAATTGTCCTAGGTTTTATCTCTGAAGTTCTTGAGGATCTGCCTT
TTGAATATGTGGAAGTTTTGAAGAAAGTTATCGAGCTAGAATTTAGCGAGATTGGAGGTGTTGGTTGA

Upstream 100 bases:

>100_bases
ACAAAAGTCCACGTAATAAAAAATGGAAAAATAGTAGCCTCAGGAAGCATTGATCTTGTCAAAATTATAGAAGAGAGAGG
ATATTCGGCGGTGGGGGACA

Downstream 100 bases:

>100_bases
TGAAAGTAAATCTAGAAGGATTGACCTACCAGAAGTATGGTGATAGCCCAACAATCAAGAGCTATACTAAATGGCATTTA
TTCGAAGAAAATTCTCCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 475; Mature: 475

Protein sequence:

>475_residues
MKSKSHLEEILKAGSLEEILGTAVPYPKEIEIKGKISRDTIEELSKVKNEPSWMLRHRLKALELFEKLPMPKWVVGIEEL
DLDNLVLYTKPEIQNEVRDWDDLPENIRKTFERLNIPEIEKRFLSGLTAVFDSESIYSKLKAEFEKKGIIMVPMEEAVRK
YPDLVKRYFGKVFPPGDHKFAALHHALWSGGVFVYVPKGVKIPFPIEAFFVIGSALEGQFEHTLIIADEGSYLHFIEGCS
APMYKGFSFHDGMVEIYAHKDATVKFTTIQNWSRNVINFNNKRAIIEDNAYVEWIEGSIGSRITYTYPSSVLKGPGAKTT
QYVVSLSNGPYLKDTGAKTWHLAPNTSSKIVSKSISANGGINIYRGLVRIMKGAINSTATVSCDSLILDKESKAYTYPHN
QNDEPTASIIHEATTGKLSEDKLFYLKARGIKEEEAKSLIVLGFISEVLEDLPFEYVEVLKKVIELEFSEIGGVG

Sequences:

>Translated_475_residues
MKSKSHLEEILKAGSLEEILGTAVPYPKEIEIKGKISRDTIEELSKVKNEPSWMLRHRLKALELFEKLPMPKWVVGIEEL
DLDNLVLYTKPEIQNEVRDWDDLPENIRKTFERLNIPEIEKRFLSGLTAVFDSESIYSKLKAEFEKKGIIMVPMEEAVRK
YPDLVKRYFGKVFPPGDHKFAALHHALWSGGVFVYVPKGVKIPFPIEAFFVIGSALEGQFEHTLIIADEGSYLHFIEGCS
APMYKGFSFHDGMVEIYAHKDATVKFTTIQNWSRNVINFNNKRAIIEDNAYVEWIEGSIGSRITYTYPSSVLKGPGAKTT
QYVVSLSNGPYLKDTGAKTWHLAPNTSSKIVSKSISANGGINIYRGLVRIMKGAINSTATVSCDSLILDKESKAYTYPHN
QNDEPTASIIHEATTGKLSEDKLFYLKARGIKEEEAKSLIVLGFISEVLEDLPFEYVEVLKKVIELEFSEIGGVG
>Mature_475_residues
MKSKSHLEEILKAGSLEEILGTAVPYPKEIEIKGKISRDTIEELSKVKNEPSWMLRHRLKALELFEKLPMPKWVVGIEEL
DLDNLVLYTKPEIQNEVRDWDDLPENIRKTFERLNIPEIEKRFLSGLTAVFDSESIYSKLKAEFEKKGIIMVPMEEAVRK
YPDLVKRYFGKVFPPGDHKFAALHHALWSGGVFVYVPKGVKIPFPIEAFFVIGSALEGQFEHTLIIADEGSYLHFIEGCS
APMYKGFSFHDGMVEIYAHKDATVKFTTIQNWSRNVINFNNKRAIIEDNAYVEWIEGSIGSRITYTYPSSVLKGPGAKTT
QYVVSLSNGPYLKDTGAKTWHLAPNTSSKIVSKSISANGGINIYRGLVRIMKGAINSTATVSCDSLILDKESKAYTYPHN
QNDEPTASIIHEATTGKLSEDKLFYLKARGIKEEEAKSLIVLGFISEVLEDLPFEYVEVLKKVIELEFSEIGGVG

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=462, Percent_Identity=37.012987012987, Blast_Score=325, Evalue=3e-90,
Organism=Escherichia coli, GI1787971, Length=130, Percent_Identity=26.1538461538462, Blast_Score=65, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 53524; Mature: 53524

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSKSHLEEILKAGSLEEILGTAVPYPKEIEIKGKISRDTIEELSKVKNEPSWMLRHRLK
CCCHHHHHHHHHCCCHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHCCCHHHHHHHHHH
ALELFEKLPMPKWVVGIEELDLDNLVLYTKPEIQNEVRDWDDLPENIRKTFERLNIPEIE
HHHHHHHCCCCCEEECHHHCCCCCEEEEECCHHHHHHHCHHCCHHHHHHHHHHCCCCHHH
KRFLSGLTAVFDSESIYSKLKAEFEKKGIIMVPMEEAVRKYPDLVKRYFGKVFPPGDHKF
HHHHHHHHHHHCCHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCHH
AALHHALWSGGVFVYVPKGVKIPFPIEAFFVIGSALEGQFEHTLIIADEGSYLHFIEGCS
HHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCC
APMYKGFSFHDGMVEIYAHKDATVKFTTIQNWSRNVINFNNKRAIIEDNAYVEWIEGSIG
CCHHCCCCCCCCEEEEEEECCCEEEEEEECCCCCCCEEECCCEEEEECCCEEEEECCCCC
SRITYTYPSSVLKGPGAKTTQYVVSLSNGPYLKDTGAKTWHLAPNTSSKIVSKSISANGG
CEEEEECCHHHHCCCCCCCEEEEEEECCCCEEECCCCCEEEECCCCHHHHHHHHCCCCCC
INIYRGLVRIMKGAINSTATVSCDSLILDKESKAYTYPHNQNDEPTASIIHEATTGKLSE
HHHHHHHHHHHHHHCCCCEEEEECCEEEECCCCEEECCCCCCCCHHHHHHHHHHCCCCCC
DKLFYLKARGIKEEEAKSLIVLGFISEVLEDLPFEYVEVLKKVIELEFSEIGGVG
CCEEEEEECCCCHHHHHHEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKSKSHLEEILKAGSLEEILGTAVPYPKEIEIKGKISRDTIEELSKVKNEPSWMLRHRLK
CCCHHHHHHHHHCCCHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHCCCHHHHHHHHHH
ALELFEKLPMPKWVVGIEELDLDNLVLYTKPEIQNEVRDWDDLPENIRKTFERLNIPEIE
HHHHHHHCCCCCEEECHHHCCCCCEEEEECCHHHHHHHCHHCCHHHHHHHHHHCCCCHHH
KRFLSGLTAVFDSESIYSKLKAEFEKKGIIMVPMEEAVRKYPDLVKRYFGKVFPPGDHKF
HHHHHHHHHHHCCHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCHH
AALHHALWSGGVFVYVPKGVKIPFPIEAFFVIGSALEGQFEHTLIIADEGSYLHFIEGCS
HHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCC
APMYKGFSFHDGMVEIYAHKDATVKFTTIQNWSRNVINFNNKRAIIEDNAYVEWIEGSIG
CCHHCCCCCCCCEEEEEEECCCEEEEEEECCCCCCCEEECCCEEEEECCCEEEEECCCCC
SRITYTYPSSVLKGPGAKTTQYVVSLSNGPYLKDTGAKTWHLAPNTSSKIVSKSISANGG
CEEEEECCHHHHCCCCCCCEEEEEEECCCCEEECCCCCEEEECCCCHHHHHHHHCCCCCC
INIYRGLVRIMKGAINSTATVSCDSLILDKESKAYTYPHNQNDEPTASIIHEATTGKLSE
HHHHHHHHHHHHHHCCCCEEEEECCEEEECCCCEEECCCCCCCCHHHHHHHHHHCCCCCC
DKLFYLKARGIKEEEAKSLIVLGFISEVLEDLPFEYVEVLKKVIELEFSEIGGVG
CCEEEEEECCCCHHHHHHEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA