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The map label for this gene is ybgK [C]

Identifier: 18977646

GI number: 18977646

Start: 1206019

End: 1207008

Strand: Direct

Name: ybgK [C]

Synonym: PF1274

Alternate gene names: 18977646

Gene position: 1206019-1207008 (Clockwise)

Preceding gene: 18977645

Following gene: 18977647

Centisome position: 63.2

GC content: 43.13

Gene sequence:

>990_bases
ATGATTGAAGTACTCTCTGTTATAACTTCTGCCACAGTTCAAGACCTGGGAAGGTGGGGATATCAGAGGTACGGTGTACC
TGTAAGCGGAGTTATGGATGAAGTTTCCGCGAGAATTGCAAATTATTTAGTGGGGAATCCTGACAATACTCCGCTAATAG
AGTTCACCGCGGGAGGAATATCCATAAAATTTCACACCTCGGCTGTTTTTGCAGTCACTGGAGATGCCACACTTTATCTA
AACGATACCCAGTTGGAGCCCTGGGAGAGTTATTGGGCTAAGAGAGGAGATGTACTTACGGTGAGGTTAAGCAAAGGAAT
GTATGGCTACATAGCATTTTCGGGGGGAATTGAGTGCAGGAAGATTTTGGGAAGTTGTTCCACTTACTTAAGGGCAAAAT
TTGGAGGCTTGCTCAAACCTGGAGATAAACTAAAGCTCGGCTACTCCCTTCTAACGGGAAAAGCGGGAAAAAGGTTACCT
GAGGAATTAAGACCGAGGTTTGATAAGACTGTTAGGGTAATCCTGGGGCCGAACATAGAACATTTTACCCCAGAGGGAAT
GAGGACTTTTCTCACCTCTGAATACACTGTAACTCCTGAATCAGATAGAATGGGATACAGGTTAGAGGGACCTAGAATAG
AACATTCCGAAAAGGGAGCGGATATAATAACTGAACCAATTCCTAGGGGAGCCATACAAGTTCCAGCAAACGGGAAACCG
ATAATAATGTTGGCGGATGCACAGACAACTGGAGGATATGCAAAAATAGCGACTGTGATAAGAGTCGATATCCCAATGGT
GGTTCAAACTAGGCCAGGAGAAAAGCTTAGATTTAAGGCAGTTAGTGTAAATGAAGCAGTTCAAGAGTTAAGGAAGCGTG
AGAGAATAATGAATGCAATAAGAAAAGCTCTCCAAGATGAATGGAATCTCTACAGAATTAAGGTTGGAAAAGAAGAATTC
CTAATCTTCGCTGGTATGGAGGAAGATTAA

Upstream 100 bases:

>100_bases
GAAAAAATTCCCCCCAGCATCGTTTCTCCTGGAGATTATGTGAAATTCGTCCCAATAGATGAGAACGAATTCTGGGAAAT
TTACAGGGAGGAGTGGGGAA

Downstream 100 bases:

>100_bases
TAACTTCTCCTTATTTCTATAAGCTGGGATAAGAAATGGCTGGAAGGATGTATGTGAAGGTCTATAGGGTCCAGGGCGAA
GTCCTAGTGGCTGCTTGTGA

Product: urea amidolyase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MIEVLSVITSATVQDLGRWGYQRYGVPVSGVMDEVSARIANYLVGNPDNTPLIEFTAGGISIKFHTSAVFAVTGDATLYL
NDTQLEPWESYWAKRGDVLTVRLSKGMYGYIAFSGGIECRKILGSCSTYLRAKFGGLLKPGDKLKLGYSLLTGKAGKRLP
EELRPRFDKTVRVILGPNIEHFTPEGMRTFLTSEYTVTPESDRMGYRLEGPRIEHSEKGADIITEPIPRGAIQVPANGKP
IIMLADAQTTGGYAKIATVIRVDIPMVVQTRPGEKLRFKAVSVNEAVQELRKRERIMNAIRKALQDEWNLYRIKVGKEEF
LIFAGMEED

Sequences:

>Translated_329_residues
MIEVLSVITSATVQDLGRWGYQRYGVPVSGVMDEVSARIANYLVGNPDNTPLIEFTAGGISIKFHTSAVFAVTGDATLYL
NDTQLEPWESYWAKRGDVLTVRLSKGMYGYIAFSGGIECRKILGSCSTYLRAKFGGLLKPGDKLKLGYSLLTGKAGKRLP
EELRPRFDKTVRVILGPNIEHFTPEGMRTFLTSEYTVTPESDRMGYRLEGPRIEHSEKGADIITEPIPRGAIQVPANGKP
IIMLADAQTTGGYAKIATVIRVDIPMVVQTRPGEKLRFKAVSVNEAVQELRKRERIMNAIRKALQDEWNLYRIKVGKEEF
LIFAGMEED
>Mature_329_residues
MIEVLSVITSATVQDLGRWGYQRYGVPVSGVMDEVSARIANYLVGNPDNTPLIEFTAGGISIKFHTSAVFAVTGDATLYL
NDTQLEPWESYWAKRGDVLTVRLSKGMYGYIAFSGGIECRKILGSCSTYLRAKFGGLLKPGDKLKLGYSLLTGKAGKRLP
EELRPRFDKTVRVILGPNIEHFTPEGMRTFLTSEYTVTPESDRMGYRLEGPRIEHSEKGADIITEPIPRGAIQVPANGKP
IIMLADAQTTGGYAKIATVIRVDIPMVVQTRPGEKLRFKAVSVNEAVQELRKRERIMNAIRKALQDEWNLYRIKVGKEEF
LIFAGMEED

Specific function: Unknown

COG id: COG1984

COG function: function code E; Allophanate hydrolase subunit 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycsJ and yeast urea amidolyase (DUR1,2) [H]

Homologues:

Organism=Escherichia coli, GI1786930, Length=313, Percent_Identity=33.2268370607029, Blast_Score=175, Evalue=3e-45,
Organism=Saccharomyces cerevisiae, GI6319685, Length=322, Percent_Identity=32.2981366459627, Blast_Score=129, Evalue=8e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003778
- InterPro:   IPR002130 [H]

Pfam domain/function: PF02626 AHS2 [H]

EC number: NA

Molecular weight: Translated: 36611; Mature: 36611

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEVLSVITSATVQDLGRWGYQRYGVPVSGVMDEVSARIANYLVGNPDNTPLIEFTAGGI
CHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCE
SIKFHTSAVFAVTGDATLYLNDTQLEPWESYWAKRGDVLTVRLSKGMYGYIAFSGGIECR
EEEEECEEEEEEECCEEEEEECCCCCHHHHHHHCCCCEEEEEECCCEEEEEEEECCCHHH
KILGSCSTYLRAKFGGLLKPGDKLKLGYSLLTGKAGKRLPEELRPRFDKTVRVILGPNIE
HHHHHHHHHHHHHHCCCCCCCCCEEECHHEECCCCCCCCCHHHCCCCCCEEEEEECCCCC
HFTPEGMRTFLTSEYTVTPESDRMGYRLEGPRIEHSEKGADIITEPIPRGAIQVPANGKP
CCCCHHHHHHHCCCEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC
IIMLADAQTTGGYAKIATVIRVDIPMVVQTRPGEKLRFKAVSVNEAVQELRKRERIMNAI
EEEEECCCCCCCHHEEEEEEEECCCEEEECCCCCCEEEEEECHHHHHHHHHHHHHHHHHH
RKALQDEWNLYRIKVGKEEFLIFAGMEED
HHHHHCCCCEEEEEECCEEEEEEECCCCC
>Mature Secondary Structure
MIEVLSVITSATVQDLGRWGYQRYGVPVSGVMDEVSARIANYLVGNPDNTPLIEFTAGGI
CHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCE
SIKFHTSAVFAVTGDATLYLNDTQLEPWESYWAKRGDVLTVRLSKGMYGYIAFSGGIECR
EEEEECEEEEEEECCEEEEEECCCCCHHHHHHHCCCCEEEEEECCCEEEEEEEECCCHHH
KILGSCSTYLRAKFGGLLKPGDKLKLGYSLLTGKAGKRLPEELRPRFDKTVRVILGPNIE
HHHHHHHHHHHHHHCCCCCCCCCEEECHHEECCCCCCCCCHHHCCCCCCEEEEEECCCCC
HFTPEGMRTFLTSEYTVTPESDRMGYRLEGPRIEHSEKGADIITEPIPRGAIQVPANGKP
CCCCHHHHHHHCCCEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC
IIMLADAQTTGGYAKIATVIRVDIPMVVQTRPGEKLRFKAVSVNEAVQELRKRERIMNAI
EEEEECCCCCCCHHEEEEEEEECCCEEEECCCCCCEEEEEECHHHHHHHHHHHHHHHHHH
RKALQDEWNLYRIKVGKEEFLIFAGMEED
HHHHHCCCCEEEEEECCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]