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The map label for this gene is ssuB [H]

Identifier: 18977610

GI number: 18977610

Start: 1171391

End: 1173289

Strand: Direct

Name: ssuB [H]

Synonym: PF1238

Alternate gene names: 18977610

Gene position: 1171391-1173289 (Clockwise)

Preceding gene: 18977609

Following gene: 18977612

Centisome position: 61.39

GC content: 39.6

Gene sequence:

>1899_bases
ATGCTCATTAGGGGGAAAGTTAAGGAGAGCAAGATTCCAAAGTTTAAACACAGATGGTTTGGAGTGCTGGAAGTTGAGGC
GAATGGGGAAACATATAGGCTTTACATGAGCGGAATTGCCCAGTGGTTCTTAGAGGGTGATGAAGTTGAGATAAAGATAC
TTAGGCCTCCAAGAGAAAAAGAAGGAATAAAAATTCTGGAATTTAATGATTATGAGCTTTACAAATTCTATAACGGCGAA
AAAATAAAAGTTTGGCCAGTGTGGGAAAAGATATACAAAACTAAGAGATTTTCACCTCTAACAGCTGAGCTTCTCTACGA
GTACGAAATAAGGGCGAGGGAGGCAACTTACGAAAGTGATTTTGAGGCTATAGCTGAACTTGAACAGTATCATTATGCGT
CTCAAAAGGAAAAAGTCGCCTTGTGGAGATGTGAAAAGTGCGGTATTATAATAGAAGCCAACACAAAACCAATATGTCCG
AAGTGTAAAACGGACAAACATGTTCATATCTTAGAAATTAAAGGTTCAACTCCAGCTTCAAGGTTTTTACTTCTTGAACT
TGTGAAGAGGGAGGAATATGAGCCCAGAGTGCTTGCCTATGTTAGGGTTGATCCCCCAATTCCCTTAATGCATAGAAAGC
TTCCCAATGGTGAAATTGACAAAAACATAAGGGAGAAAGTTTTTCCAAAGGATTGCTTAAGCCTAGCTTCTGGCCGGAAA
AGACTAATGTATGAACTCTTTGTTGAACTTAGGAAGAAATATCCAAAGAAAATTGCTCGCTCTCTCTTATGGGAAAAGGC
TAAAGAGAGAGCTCTTAGGGAGAGCAACACTGCGGGGGCTAGGATAGCGAGAGTTGTAGTTCACCCAGATTATAGGTCAG
ATGGTCTTGGCCAATTAAGCGTGAAAGCTGCATTGGAATGGATTGCTGAAAGAAGAATTCCTGAAATGAGGAAAAAGAAG
CATTTTGTTGAAACTATTGCTCAAATGGCTAGATACAATCCATTTTTTGAGAAAGTTGGATTTAGATACGTTTGGGAAAC
GGCTAGCGGAAGACCAGTTTTGATTTATCCTCTGACTGAAGAGGCTAAAGAATACCTAGAAAATTACTTCAAAAATGATC
CATATGCTCCTAAGGAACCATTATGGAAGCCAAGTTATGGAAAGGTTGAGCCATTAAATGGTCCGATAGTTTTTAAGAAT
GTAAGTAAAGTGTTTGAAAGTGAGCTTGATATTAAAGGTCTTCCTGAAGAAATCCAGGATCTTTTGAAAGCTTTTGGAGT
TAGGCATAGAGTAATCCAAAGACCCGTTTTGAGAAACTTGAACTTTGAAATAAAGCCAGGTGAAGTTATAGTAGTAGTAG
GGGCCAGTGGGGCTGGGAAGACCACGTTACTGAGACTTATTCTTGGAGCAATAATGAAGTACTGGGAAGAAAAGTATAGG
CCAACAAATGGAGAAATTAAGGTTCCTGATAATGCTAAGGTTTCCGTTTTAATACCGGGAGAGTTTGAACCTGAATTTGG
TTCGGAGAGTATATTAGAACACGTTTACAGAAAAATTAGAGACTTAAATGCCGCTGTGGAGGTATTGAATAGGGCAGGAC
TCAGTGATGCAGTTCTCTATAGGGCCAAGTTTTCAGAACTGTCTACGGGGCAAAAAGAAAGAGCAAAAATTGCTTCTTTG
CTGGCAGAAAAGCCGAACTTAATTTTGATTGATGAATTTGCTGCCCACTTAGATACCCTAACTGCAATGAGAGTTGCCAG
AAAAGTTGCAGAAATAATAAGGGAAGCAGGAATAACGGCGGTTATAATAACTCATCGGCCTGAAGTTGTTAAGGCGCTCG
ATCCTGATAGGATATTATTCGTTGGTTATGGAACGGCAATAATGAAAGATAAGCTCTAG

Upstream 100 bases:

>100_bases
TAGAAGAACTATGGGGTAAAAAGAAAATTTTAGCTATAATTCATGTTACCTGTTAGAAAAAGTTAAATCTATTTATCCCA
AGAACTAATTTGGTGGTTTA

Downstream 100 bases:

>100_bases
GGAGCCCTGGGAATTCCCAGGGTAGAAAGAGCATAAGAAACTTCATCTGGATTGTTGGTCGTAAAAACTATAGGTGCTCC
CGTTTTTCTTTTTATTAAAA

Product: putative ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 632; Mature: 632

Protein sequence:

>632_residues
MLIRGKVKESKIPKFKHRWFGVLEVEANGETYRLYMSGIAQWFLEGDEVEIKILRPPREKEGIKILEFNDYELYKFYNGE
KIKVWPVWEKIYKTKRFSPLTAELLYEYEIRAREATYESDFEAIAELEQYHYASQKEKVALWRCEKCGIIIEANTKPICP
KCKTDKHVHILEIKGSTPASRFLLLELVKREEYEPRVLAYVRVDPPIPLMHRKLPNGEIDKNIREKVFPKDCLSLASGRK
RLMYELFVELRKKYPKKIARSLLWEKAKERALRESNTAGARIARVVVHPDYRSDGLGQLSVKAALEWIAERRIPEMRKKK
HFVETIAQMARYNPFFEKVGFRYVWETASGRPVLIYPLTEEAKEYLENYFKNDPYAPKEPLWKPSYGKVEPLNGPIVFKN
VSKVFESELDIKGLPEEIQDLLKAFGVRHRVIQRPVLRNLNFEIKPGEVIVVVGASGAGKTTLLRLILGAIMKYWEEKYR
PTNGEIKVPDNAKVSVLIPGEFEPEFGSESILEHVYRKIRDLNAAVEVLNRAGLSDAVLYRAKFSELSTGQKERAKIASL
LAEKPNLILIDEFAAHLDTLTAMRVARKVAEIIREAGITAVIITHRPEVVKALDPDRILFVGYGTAIMKDKL

Sequences:

>Translated_632_residues
MLIRGKVKESKIPKFKHRWFGVLEVEANGETYRLYMSGIAQWFLEGDEVEIKILRPPREKEGIKILEFNDYELYKFYNGE
KIKVWPVWEKIYKTKRFSPLTAELLYEYEIRAREATYESDFEAIAELEQYHYASQKEKVALWRCEKCGIIIEANTKPICP
KCKTDKHVHILEIKGSTPASRFLLLELVKREEYEPRVLAYVRVDPPIPLMHRKLPNGEIDKNIREKVFPKDCLSLASGRK
RLMYELFVELRKKYPKKIARSLLWEKAKERALRESNTAGARIARVVVHPDYRSDGLGQLSVKAALEWIAERRIPEMRKKK
HFVETIAQMARYNPFFEKVGFRYVWETASGRPVLIYPLTEEAKEYLENYFKNDPYAPKEPLWKPSYGKVEPLNGPIVFKN
VSKVFESELDIKGLPEEIQDLLKAFGVRHRVIQRPVLRNLNFEIKPGEVIVVVGASGAGKTTLLRLILGAIMKYWEEKYR
PTNGEIKVPDNAKVSVLIPGEFEPEFGSESILEHVYRKIRDLNAAVEVLNRAGLSDAVLYRAKFSELSTGQKERAKIASL
LAEKPNLILIDEFAAHLDTLTAMRVARKVAEIIREAGITAVIITHRPEVVKALDPDRILFVGYGTAIMKDKL
>Mature_632_residues
MLIRGKVKESKIPKFKHRWFGVLEVEANGETYRLYMSGIAQWFLEGDEVEIKILRPPREKEGIKILEFNDYELYKFYNGE
KIKVWPVWEKIYKTKRFSPLTAELLYEYEIRAREATYESDFEAIAELEQYHYASQKEKVALWRCEKCGIIIEANTKPICP
KCKTDKHVHILEIKGSTPASRFLLLELVKREEYEPRVLAYVRVDPPIPLMHRKLPNGEIDKNIREKVFPKDCLSLASGRK
RLMYELFVELRKKYPKKIARSLLWEKAKERALRESNTAGARIARVVVHPDYRSDGLGQLSVKAALEWIAERRIPEMRKKK
HFVETIAQMARYNPFFEKVGFRYVWETASGRPVLIYPLTEEAKEYLENYFKNDPYAPKEPLWKPSYGKVEPLNGPIVFKN
VSKVFESELDIKGLPEEIQDLLKAFGVRHRVIQRPVLRNLNFEIKPGEVIVVVGASGAGKTTLLRLILGAIMKYWEEKYR
PTNGEIKVPDNAKVSVLIPGEFEPEFGSESILEHVYRKIRDLNAAVEVLNRAGLSDAVLYRAKFSELSTGQKERAKIASL
LAEKPNLILIDEFAAHLDTLTAMRVARKVAEIIREAGITAVIITHRPEVVKALDPDRILFVGYGTAIMKDKL

Specific function: Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system [H]

COG id: COG2401

COG function: function code R; ABC-type ATPase fused to a predicted acetyltransferase domain

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI90421313, Length=212, Percent_Identity=28.3018867924528, Blast_Score=69, Evalue=1e-11,
Organism=Escherichia coli, GI1787105, Length=192, Percent_Identity=33.3333333333333, Blast_Score=78, Evalue=2e-15,
Organism=Escherichia coli, GI87081791, Length=207, Percent_Identity=28.5024154589372, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI87081834, Length=204, Percent_Identity=29.4117647058824, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1786563, Length=200, Percent_Identity=29.5, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1787041, Length=230, Percent_Identity=27.3913043478261, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1787029, Length=210, Percent_Identity=32.8571428571429, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI1789891, Length=244, Percent_Identity=26.2295081967213, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1786698, Length=214, Percent_Identity=25.7009345794392, Blast_Score=67, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI193208177, Length=225, Percent_Identity=29.3333333333333, Blast_Score=79, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI193209708, Length=211, Percent_Identity=27.9620853080569, Blast_Score=70, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17559834, Length=180, Percent_Identity=28.3333333333333, Blast_Score=67, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR017875
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 73048; Mature: 73048

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIRGKVKESKIPKFKHRWFGVLEVEANGETYRLYMSGIAQWFLEGDEVEIKILRPPREK
CCCCCCCCCCCCCCHHHCEEEEEEEECCCCEEEEHHHHHHHHHCCCCCEEEEEECCCCCC
EGIKILEFNDYELYKFYNGEKIKVWPVWEKIYKTKRFSPLTAELLYEYEIRAREATYESD
CCEEEEEECCEEEEEEECCCEEEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHH
FEAIAELEQYHYASQKEKVALWRCEKCGIIIEANTKPICPKCKTDKHVHILEIKGSTPAS
HHHHHHHHHHHHHCCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCCHH
RFLLLELVKREEYEPRVLAYVRVDPPIPLMHRKLPNGEIDKNIREKVFPKDCLSLASGRK
HHHHHHHHHHCCCCCEEEEEEEECCCCCHHHCCCCCCCCCHHHHHHCCHHHHHHHHHHHH
RLMYELFVELRKKYPKKIARSLLWEKAKERALRESNTAGARIARVVVHPDYRSDGLGQLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCHHH
VKAALEWIAERRIPEMRKKKHFVETIAQMARYNPFFEKVGFRYVWETASGRPVLIYPLTE
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEEECCCCCEEEEEECCH
EAKEYLENYFKNDPYAPKEPLWKPSYGKVEPLNGPIVFKNVSKVFESELDIKGLPEEIQD
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCCCCCHHHHH
LLKAFGVRHRVIQRPVLRNLNFEIKPGEVIVVVGASGAGKTTLLRLILGAIMKYWEEKYR
HHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCC
PTNGEIKVPDNAKVSVLIPGEFEPEFGSESILEHVYRKIRDLNAAVEVLNRAGLSDAVLY
CCCCEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
RAKFSELSTGQKERAKIASLLAEKPNLILIDEFAAHLDTLTAMRVARKVAEIIREAGITA
HHHHHHHCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
VIITHRPEVVKALDPDRILFVGYGTAIMKDKL
EEEECCCHHHHHCCCCEEEEEEECHHHHCCCC
>Mature Secondary Structure
MLIRGKVKESKIPKFKHRWFGVLEVEANGETYRLYMSGIAQWFLEGDEVEIKILRPPREK
CCCCCCCCCCCCCCHHHCEEEEEEEECCCCEEEEHHHHHHHHHCCCCCEEEEEECCCCCC
EGIKILEFNDYELYKFYNGEKIKVWPVWEKIYKTKRFSPLTAELLYEYEIRAREATYESD
CCEEEEEECCEEEEEEECCCEEEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHH
FEAIAELEQYHYASQKEKVALWRCEKCGIIIEANTKPICPKCKTDKHVHILEIKGSTPAS
HHHHHHHHHHHHHCCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCCHH
RFLLLELVKREEYEPRVLAYVRVDPPIPLMHRKLPNGEIDKNIREKVFPKDCLSLASGRK
HHHHHHHHHHCCCCCEEEEEEEECCCCCHHHCCCCCCCCCHHHHHHCCHHHHHHHHHHHH
RLMYELFVELRKKYPKKIARSLLWEKAKERALRESNTAGARIARVVVHPDYRSDGLGQLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCHHH
VKAALEWIAERRIPEMRKKKHFVETIAQMARYNPFFEKVGFRYVWETASGRPVLIYPLTE
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEEECCCCCEEEEEECCH
EAKEYLENYFKNDPYAPKEPLWKPSYGKVEPLNGPIVFKNVSKVFESELDIKGLPEEIQD
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCCCCCHHHHH
LLKAFGVRHRVIQRPVLRNLNFEIKPGEVIVVVGASGAGKTTLLRLILGAIMKYWEEKYR
HHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCC
PTNGEIKVPDNAKVSVLIPGEFEPEFGSESILEHVYRKIRDLNAAVEVLNRAGLSDAVLY
CCCCEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
RAKFSELSTGQKERAKIASLLAEKPNLILIDEFAAHLDTLTAMRVARKVAEIIREAGITA
HHHHHHHCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
VIITHRPEVVKALDPDRILFVGYGTAIMKDKL
EEEECCCHHHHHCCCCEEEEEEECHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA