| Definition | Pyrococcus furiosus DSM 3638, complete genome. |
|---|---|
| Accession | NC_003413 |
| Length | 1,908,256 |
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The map label for this gene is ccrB
Identifier: 18977607
GI number: 18977607
Start: 1170171
End: 1170542
Strand: Direct
Name: ccrB
Synonym: PF1235
Alternate gene names: 18977607
Gene position: 1170171-1170542 (Clockwise)
Preceding gene: 18977604
Following gene: 18977608
Centisome position: 61.32
GC content: 41.67
Gene sequence:
>372_bases ATGGACCTTAGGGAAGTAGCTTTAGTATTGATTGGAGGAGGAACAGGAGCTGTAGCGAGATACTATCTTTCTGGAGTTCT TCCTGTATATAGGAGCTTCCCTGTAGGAACCCTCCTAGTAAACTCTTTAGCTAGTTTTCTCCTGGGTTATCTTTACGGCC TTATCTTCTGGGGCCTTGATGTATCTCGAGAGAGCAGACTCTTTCTTGGTACTGGATTTTGTGGTGGACTAAGCACGTTC TCCACCTTTTCGTATGAAACATTTTCTTTAATAAGAGAGGGGGAATACTTAACTGCACTCCTTAATATCTTCGCTAATGT TTTAGCCACAATTTTCCTAGTATTCTTAGGGTTTGTACTTGCAAGAAGGTGA
Upstream 100 bases:
>100_bases TTTGCTAAGTTACATATAATTGCATTATTATAAATTATGCAAAAATTATAAATGTATAACCTACAAAACGCTTTTATCTT TAGTTAGACTCTTTTCAACC
Downstream 100 bases:
>100_bases GAAAAATGGTTGAGGTCGAACACTGGAATACTCTTCGGTTGAAAATATACATAGGGGAACACGATTCCTGGGATGGAAAA CCCTTATATAAAGCAATAGT
Product: camphor resistance protein CrcB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MDLREVALVLIGGGTGAVARYYLSGVLPVYRSFPVGTLLVNSLASFLLGYLYGLIFWGLDVSRESRLFLGTGFCGGLSTF STFSYETFSLIREGEYLTALLNIFANVLATIFLVFLGFVLARR
Sequences:
>Translated_123_residues MDLREVALVLIGGGTGAVARYYLSGVLPVYRSFPVGTLLVNSLASFLLGYLYGLIFWGLDVSRESRLFLGTGFCGGLSTF STFSYETFSLIREGEYLTALLNIFANVLATIFLVFLGFVLARR >Mature_123_residues MDLREVALVLIGGGTGAVARYYLSGVLPVYRSFPVGTLLVNSLASFLLGYLYGLIFWGLDVSRESRLFLGTGFCGGLSTF STFSYETFSLIREGEYLTALLNIFANVLATIFLVFLGFVLARR
Specific function: Not Known. Overproduction Leads To Camphor Resistance And Chromosome Condensation; Deletion Increases Sensibility To Nucleoid Decondensation. Probably Interacts With The Heat-Shock Protein Cspe, Possibly Providing A Way To Anchor The Chromosome To The Mem
COG id: COG0239
COG function: function code D; Integral membrane protein possibly involved in chromosome condensation
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CrcB family
Homologues:
Organism=Escherichia coli, GI1786842, Length=113, Percent_Identity=41.5929203539823, Blast_Score=83, Evalue=4e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CRCB_PYRFU (Q8U1H3)
Other databases:
- EMBL: AE009950 - RefSeq: NP_578964.1 - ProteinModelPortal: Q8U1H3 - EnsemblBacteria: EBPYRT00000004517 - GeneID: 1469107 - GenomeReviews: AE009950_GR - KEGG: pfu:PF1235 - NMPDR: fig|186497.1.peg.1278 - GeneTree: EBGT00050000022175 - HOGENOM: HBG753179 - OMA: FRHFINT - ProtClustDB: PRK14207 - HAMAP: MF_00454 - InterPro: IPR003691 - TIGRFAMs: TIGR00494
Pfam domain/function: PF02537 CRCB
EC number: NA
Molecular weight: Translated: 13485; Mature: 13485
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xccf0c34)-; HASH(0xe36e964)-; HASH(0xe80bb28)-; HASH(0xb3bb8ac)-;
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLREVALVLIGGGTGAVARYYLSGVLPVYRSFPVGTLLVNSLASFLLGYLYGLIFWGLD CCHHHEEEHEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC VSRESRLFLGTGFCGGLSTFSTFSYETFSLIREGEYLTALLNIFANVLATIFLVFLGFVL CCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH ARR HCH >Mature Secondary Structure MDLREVALVLIGGGTGAVARYYLSGVLPVYRSFPVGTLLVNSLASFLLGYLYGLIFWGLD CCHHHEEEHEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC VSRESRLFLGTGFCGGLSTFSTFSYETFSLIREGEYLTALLNIFANVLATIFLVFLGFVL CCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH ARR HCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA