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The map label for this gene is yigC [C]

Identifier: 18977510

GI number: 18977510

Start: 1092336

End: 1093598

Strand: Reverse

Name: yigC [C]

Synonym: PF1138

Alternate gene names: 18977510

Gene position: 1093598-1092336 (Counterclockwise)

Preceding gene: 18977511

Following gene: 18977509

Centisome position: 57.31

GC content: 44.26

Gene sequence:

>1263_bases
ATGTTGAGGGAGATAATTGAGAAGTTTGATGATACCGTAATAGTTGATAAGCCCGTGAAAAAGGAATACGAGATAACTAA
ATACCTGCTTAAGTATAAGGACAGGCCCGTCTTATTCAAAGACGTTGAGGGCTGGGAAGTTGCTGGGAACATTTGGTCAA
CAAGAGATAGGATTGCAAAATTCCTAAATACCGACAAGAAGGGACTCCTCGAGCTCTTAGCCTATTCCATGGAAAATCCA
TCGAAGTATGAAATCGTAGATGATGCGGAGTTTTTAAGGAACGAGAATGAGGTAAACCTACTGGATCTCCCAGTTCCCAA
GTTCTACCCCAAGGATGGGGGAAGATACTTTACCTCAGCAATCGTTGTGGCAAAGAGAGGGGACTTTGTTAACCTCTCTT
TCCACAGAATGATGATTCTGGATGAGAATAAAGCAGCCATTAGAATAGTTCCCAGGCACCTATACGCCATGTGGAAGGAG
AGTGTTGAAAGTGGGGAGGAGTTAGAGGTTAGGATAATAGTTGGAAACCCAATCCACGTTTTATTGGCTGGGGCGACCAG
CGTAGCTTATGGAATAAGTGAGCTTGAGATTGCATCTACAATTAGTAGGAGAGCCTTTGGAAGGCCGTTAGAGGTAGTTG
ATGTCAACGGAATTCCCGTCCCTGTCGAGAGTGAGTTCGTCTTTGAGGCTAAGATAACCGATGAGATGGTTGATGAAGGA
CCATTCGTTGATATAACTGGGACTTACGATATAGTTAGGAAGCAACCCGTTGTTGTTTTTGAGAAAATGTACCATGTAGA
CAATCCAATATTCCACGCTTTACTTCCTGGAGGTTATGAGCACTATATGCTCATGGGCCTTCCAAAGGAGCCGCAAATAT
ATACTAGTGTGAAAAGAGTAGTCCCAAAGGTTCATGGAGTTAGACTGACAGAAGGAGGCTGCATGTGGTTGCACGCTGTG
GTTTCAATAACGAAGCAACATGAGGGGGACGGAAAGAATGCAATTCTGGCAGCATTTGCTGGCCATCCAAGCCTTAAGAG
GGTAATAGTTGTGGATGAGGATATAGACATATACGATGACAGGGAAGTTGAGTGGGCGGTGGCAACGAGGTTCCAGCCAG
ATAAAGATCTTGTAATCATCCCAAACGCTAGAGGGAGCTCATTAGATCCATCTGGGAAAGATGGACTAACAGCTAAGTGG
GGTATAGATGCTACGAAGAGTTTGGATAGGAAAGAAGAGTTTGAAAAGGCTAGGTTAGAGTGA

Upstream 100 bases:

>100_bases
CTGATATCTGGGGATAGGGGAAGGACCACCCCTTCAGTGTCTGAAATTTTGGGAAAGGAAGCTTGGTGTGAAATCTTAGA
TGTTTTAGAGGTGTTGGACG

Downstream 100 bases:

>100_bases
AGTTTTTGAAATTTTTTCGGTACACGTTGATCGGGTTTCTTTTTTGGTTTTTTAGTTTTCTAAGGGCGTAATTTTTGAAT
TGGAGGTTTTGGAGAAGCTA

Product: hypothetical protein

Products: 2-octaprenylphenol; CO2 [C]

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MLREIIEKFDDTVIVDKPVKKEYEITKYLLKYKDRPVLFKDVEGWEVAGNIWSTRDRIAKFLNTDKKGLLELLAYSMENP
SKYEIVDDAEFLRNENEVNLLDLPVPKFYPKDGGRYFTSAIVVAKRGDFVNLSFHRMMILDENKAAIRIVPRHLYAMWKE
SVESGEELEVRIIVGNPIHVLLAGATSVAYGISELEIASTISRRAFGRPLEVVDVNGIPVPVESEFVFEAKITDEMVDEG
PFVDITGTYDIVRKQPVVVFEKMYHVDNPIFHALLPGGYEHYMLMGLPKEPQIYTSVKRVVPKVHGVRLTEGGCMWLHAV
VSITKQHEGDGKNAILAAFAGHPSLKRVIVVDEDIDIYDDREVEWAVATRFQPDKDLVIIPNARGSSLDPSGKDGLTAKW
GIDATKSLDRKEEFEKARLE

Sequences:

>Translated_420_residues
MLREIIEKFDDTVIVDKPVKKEYEITKYLLKYKDRPVLFKDVEGWEVAGNIWSTRDRIAKFLNTDKKGLLELLAYSMENP
SKYEIVDDAEFLRNENEVNLLDLPVPKFYPKDGGRYFTSAIVVAKRGDFVNLSFHRMMILDENKAAIRIVPRHLYAMWKE
SVESGEELEVRIIVGNPIHVLLAGATSVAYGISELEIASTISRRAFGRPLEVVDVNGIPVPVESEFVFEAKITDEMVDEG
PFVDITGTYDIVRKQPVVVFEKMYHVDNPIFHALLPGGYEHYMLMGLPKEPQIYTSVKRVVPKVHGVRLTEGGCMWLHAV
VSITKQHEGDGKNAILAAFAGHPSLKRVIVVDEDIDIYDDREVEWAVATRFQPDKDLVIIPNARGSSLDPSGKDGLTAKW
GIDATKSLDRKEEFEKARLE
>Mature_420_residues
MLREIIEKFDDTVIVDKPVKKEYEITKYLLKYKDRPVLFKDVEGWEVAGNIWSTRDRIAKFLNTDKKGLLELLAYSMENP
SKYEIVDDAEFLRNENEVNLLDLPVPKFYPKDGGRYFTSAIVVAKRGDFVNLSFHRMMILDENKAAIRIVPRHLYAMWKE
SVESGEELEVRIIVGNPIHVLLAGATSVAYGISELEIASTISRRAFGRPLEVVDVNGIPVPVESEFVFEAKITDEMVDEG
PFVDITGTYDIVRKQPVVVFEKMYHVDNPIFHALLPGGYEHYMLMGLPKEPQIYTSVKRVVPKVHGVRLTEGGCMWLHAV
VSITKQHEGDGKNAILAAFAGHPSLKRVIVVDEDIDIYDDREVEWAVATRFQPDKDLVIIPNARGSSLDPSGKDGLTAKW
GIDATKSLDRKEEFEKARLE

Specific function: Unknown

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family [H]

Homologues:

Organism=Escherichia coli, GI1790277, Length=336, Percent_Identity=27.0833333333333, Blast_Score=106, Evalue=3e-24,
Organism=Saccharomyces cerevisiae, GI6320748, Length=462, Percent_Identity=24.2424242424242, Blast_Score=78, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002830
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01977 UbiD [H]

EC number: NA

Molecular weight: Translated: 47621; Mature: 47621

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLREIIEKFDDTVIVDKPVKKEYEITKYLLKYKDRPVLFKDVEGWEVAGNIWSTRDRIAK
CHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCEEEECCCHHHHHHHHH
FLNTDKKGLLELLAYSMENPSKYEIVDDAEFLRNENEVNLLDLPVPKFYPKDGGRYFTSA
HHCCCHHHHHHHHHHHCCCCCCEEEECCHHHHCCCCCCEEEECCCCCCCCCCCCCEEEEE
IVVAKRGDFVNLSFHRMMILDENKAAIRIVPRHLYAMWKESVESGEELEVRIIVGNPIHV
EEEEECCCEEEEEEEEEEEEECCCCEEEEEHHHHHHHHHHHHCCCCCEEEEEEECCCEEE
LLAGATSVAYGISELEIASTISRRAFGRPLEVVDVNGIPVPVESEFVFEAKITDEMVDEG
EEECCHHHHHCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEECCHHHHCCC
PFVDITGTYDIVRKQPVVVFEKMYHVDNPIFHALLPGGYEHYMLMGLPKEPQIYTSVKRV
CEEEEECCHHHHHCCCHHHHHHHHHCCCCCEEEECCCCCCEEEEEECCCCCHHHHHHHHH
VPKVHGVRLTEGGCMWLHAVVSITKQHEGDGKNAILAAFAGHPSLKRVIVVDEDIDIYDD
HHHHCCEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCC
REVEWAVATRFQPDKDLVIIPNARGSSLDPSGKDGLTAKWGIDATKSLDRKEEFEKARLE
CCEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCEEECCCCHHHCCHHHHHHHHHCCC
>Mature Secondary Structure
MLREIIEKFDDTVIVDKPVKKEYEITKYLLKYKDRPVLFKDVEGWEVAGNIWSTRDRIAK
CHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCEEEECCCHHHHHHHHH
FLNTDKKGLLELLAYSMENPSKYEIVDDAEFLRNENEVNLLDLPVPKFYPKDGGRYFTSA
HHCCCHHHHHHHHHHHCCCCCCEEEECCHHHHCCCCCCEEEECCCCCCCCCCCCCEEEEE
IVVAKRGDFVNLSFHRMMILDENKAAIRIVPRHLYAMWKESVESGEELEVRIIVGNPIHV
EEEEECCCEEEEEEEEEEEEECCCCEEEEEHHHHHHHHHHHHCCCCCEEEEEEECCCEEE
LLAGATSVAYGISELEIASTISRRAFGRPLEVVDVNGIPVPVESEFVFEAKITDEMVDEG
EEECCHHHHHCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEECCHHHHCCC
PFVDITGTYDIVRKQPVVVFEKMYHVDNPIFHALLPGGYEHYMLMGLPKEPQIYTSVKRV
CEEEEECCHHHHHCCCHHHHHHHHHCCCCCEEEECCCCCCEEEEEECCCCCHHHHHHHHH
VPKVHGVRLTEGGCMWLHAVVSITKQHEGDGKNAILAAFAGHPSLKRVIVVDEDIDIYDD
HHHHCCEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCC
REVEWAVATRFQPDKDLVIIPNARGSSLDPSGKDGLTAKWGIDATKSLDRKEEFEKARLE
CCEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCEEECCCCHHHCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 3-octaprenyl-4-hydroxybenzoate [C]

Specific reaction: 3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2 [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]