| Definition | Pyrococcus furiosus DSM 3638, complete genome. |
|---|---|
| Accession | NC_003413 |
| Length | 1,908,256 |
Click here to switch to the map view.
The map label for this gene is 18977508
Identifier: 18977508
GI number: 18977508
Start: 1085844
End: 1087967
Strand: Direct
Name: 18977508
Synonym: PF1136
Alternate gene names: NA
Gene position: 1085844-1087967 (Clockwise)
Preceding gene: 18977507
Following gene: 18977512
Centisome position: 56.9
GC content: 38.56
Gene sequence:
>2124_bases ATGGGTAAGTGGAGCGATGATATTTTAATTAATGCATCGAAGGAGAGTCTCATACCCCTGATTCTAGAATTACTTAAGAG AACAGGGTTCAGAGAAAGCGAAAAGGTTTCTGAAGAATGGGGCTTTGACATAGTGGGAATCAGAGACGATCCCCTGAGCG GAACTGAAAAAGTGCTCTTAAAAATTCACACGAGTGGAATGCTTAGCTCTAAAGATGTGAACGTTTTTGCAGATGTCCTT AGAACGCATAAGGCAGACAAGGGGATTATAGTTGTTCCCTATGGAGTCACTAGAGATGCAAGAATTCTAATATCTAGAGA CTACAAAGGACTTATAGTAACTTGGGATAGGAAAAAACTCATTTCTCTCTTTGAAAGATATGGAATAGAGCCTCCAGAAG AACTCCTACAAAAGAGGGAGGAAGAACCAAAAAAAGAAGAGCCAAAGTTGAAACCAATAAAGCTAGATGCTCCCCTCTTA TTTGACGTCTCTGCCGAAGATCTCTTTAGAAAACTTATGGGATTTCTAAGTTCTAGATATCCTATAAAGAGAGAAGTTGT TAGTATAGAAGAGCTCAAAGTTAAGCTCTCCGTGGGGTACATTCTATCTTGGAGTGCAAACGAGAGGAAAGGAAAGGGTG TAGTTCTCTCTAAGGAGGAGATAGTCCTTGACGCCACGGAGGATGAAAAACTTAAGAACAACGTTTCCAAAGCCTTACTT AATGATTATTCTGTAATTACGGCAACTGACAAGGAGATTGACGTGACAATGACATTGACAGAAGCTGTTGTTCTCTTCAA AGAATTTGCAGCAAAGAATTTAGGCCTCCTTGAGAGTGACATATCAATAGTGGATAGAAAGAGAGTTTACCTCCCTGTTG AGGCTTATTTTAAGTTAAAAATTGGAGATAATGAAGGAAAGGCAACTATTGACCTAAAATCTGGAGAAATCAACGTTGAA ATAACTCCACTTTCCCAGGAGTATCTTGTAGGGAAAGTAAAGGAAATAGTTGTTGAGAAAACAGGGGAAGAGGTCAAAGG AGTTAGAACAGAGGAGAGAAAAGGGAAAATTAGAGTTTACGGAAGCACGGAAAGGTTCAAGTTCGAATTCGTTGTTAATG TCTATACCGGGGAAGTTCTTTCTGAAGAGATAGTACTGACTGATGAGGCAATAGTGGAGATAATCAAGGAAAACTATCTG GGAGAGATAATAGGGATAGAGAGGGGCAAAAATACAGCAATAGTTGATCTACTAACTCAAGATGGAATATTAATAGTCGA GGTTGATCTTGGAACTGGAAAAATAAAAGAGGCTAAGAAGTTGCCAACTCCCGAAAAAGGTGCTGAAATCGCAAGGAATG TCGTTATTGAGAACTTTCCAATTAAGAACATCGAATTTAAATCGTACAGAATTCTCAACCATCAATACCTCGAAATAACG CTGGAAGGAGAAGACGGAAAAGCCATAGTAAAACTCGAAGGAGAAAGAGGAGAAGTTCTTGATTATAGTGTTGAGATCTC AGAAAAAGTTGCTAGCGAACTTGTAAGGAATAAATACGCGGGGAAAATTGAGGTAGAGAAAGTAGAGAAGGACGAAAGTT CATATATAATAACGGGAAGCTTGGAAAATCACAAAGTCAAGATAAAAGTCAGCAAAGACGGAAAGATTTTGGAGGAAATA GATAGAGTTCTGAAAGAAGAAGTTGCTAAAGAAAAAGCCATTGAGGCAGTAAAGAAAGTTGAAAGCGAAGGAGTTCTAGA GAGTCTAGAGCTAAATGACAATTGGATAGTCAAGTTCTCGGGCCCAAATAAAGTTGGTACGTTAATTCTCCATAGGGCAA CTGGAGAAGTCATTAATAGAGATGTCAGATTTACAGAGCTATGGATAGAGAAGACATTCTATGAGCATCTAAAGAGGAAG TATGGAGAGTCAAATCTAAAGACAGAGTGGCTAATTCATCACAAAGATAAAGGGCAAGTTACGATAAAAGTTACTGGAGA CAATGGAATCTACTATGGAAAAATAGATGTAAAGACAGGAGAAATAATTGAAGAAGACAAGGCACCGAAGAAGGGTGTGC TTGCAAAAATTAAACAACTTCAGCTAGATGCTAAGTACAAGTAA
Upstream 100 bases:
>100_bases AGCTATGGAGATGGGTATAATCTTTTGATCTTTTGATTTCTTCTTTCAGCTAAAATATTAAATACTTTTATTTCGTGATG ATAATTTGTAGGGTGATTAA
Downstream 100 bases:
>100_bases CCCTTTTTAATATTTTTAAAAAAAAGAAAGCTCTCAAATAGCCCTCCAGAATGGATCTTCCTTTGCTTTTATCTGGGCAA TAATCTTAAGAGCCTTTATA
Product: hypothetical protein
Products: NA
Alternate protein names: Restriction Endonuclease Family; Peptidase Propeptide And YPEB Domain Protein
Number of amino acids: Translated: 707; Mature: 706
Protein sequence:
>707_residues MGKWSDDILINASKESLIPLILELLKRTGFRESEKVSEEWGFDIVGIRDDPLSGTEKVLLKIHTSGMLSSKDVNVFADVL RTHKADKGIIVVPYGVTRDARILISRDYKGLIVTWDRKKLISLFERYGIEPPEELLQKREEEPKKEEPKLKPIKLDAPLL FDVSAEDLFRKLMGFLSSRYPIKREVVSIEELKVKLSVGYILSWSANERKGKGVVLSKEEIVLDATEDEKLKNNVSKALL NDYSVITATDKEIDVTMTLTEAVVLFKEFAAKNLGLLESDISIVDRKRVYLPVEAYFKLKIGDNEGKATIDLKSGEINVE ITPLSQEYLVGKVKEIVVEKTGEEVKGVRTEERKGKIRVYGSTERFKFEFVVNVYTGEVLSEEIVLTDEAIVEIIKENYL GEIIGIERGKNTAIVDLLTQDGILIVEVDLGTGKIKEAKKLPTPEKGAEIARNVVIENFPIKNIEFKSYRILNHQYLEIT LEGEDGKAIVKLEGERGEVLDYSVEISEKVASELVRNKYAGKIEVEKVEKDESSYIITGSLENHKVKIKVSKDGKILEEI DRVLKEEVAKEKAIEAVKKVESEGVLESLELNDNWIVKFSGPNKVGTLILHRATGEVINRDVRFTELWIEKTFYEHLKRK YGESNLKTEWLIHHKDKGQVTIKVTGDNGIYYGKIDVKTGEIIEEDKAPKKGVLAKIKQLQLDAKYK
Sequences:
>Translated_707_residues MGKWSDDILINASKESLIPLILELLKRTGFRESEKVSEEWGFDIVGIRDDPLSGTEKVLLKIHTSGMLSSKDVNVFADVL RTHKADKGIIVVPYGVTRDARILISRDYKGLIVTWDRKKLISLFERYGIEPPEELLQKREEEPKKEEPKLKPIKLDAPLL FDVSAEDLFRKLMGFLSSRYPIKREVVSIEELKVKLSVGYILSWSANERKGKGVVLSKEEIVLDATEDEKLKNNVSKALL NDYSVITATDKEIDVTMTLTEAVVLFKEFAAKNLGLLESDISIVDRKRVYLPVEAYFKLKIGDNEGKATIDLKSGEINVE ITPLSQEYLVGKVKEIVVEKTGEEVKGVRTEERKGKIRVYGSTERFKFEFVVNVYTGEVLSEEIVLTDEAIVEIIKENYL GEIIGIERGKNTAIVDLLTQDGILIVEVDLGTGKIKEAKKLPTPEKGAEIARNVVIENFPIKNIEFKSYRILNHQYLEIT LEGEDGKAIVKLEGERGEVLDYSVEISEKVASELVRNKYAGKIEVEKVEKDESSYIITGSLENHKVKIKVSKDGKILEEI DRVLKEEVAKEKAIEAVKKVESEGVLESLELNDNWIVKFSGPNKVGTLILHRATGEVINRDVRFTELWIEKTFYEHLKRK YGESNLKTEWLIHHKDKGQVTIKVTGDNGIYYGKIDVKTGEIIEEDKAPKKGVLAKIKQLQLDAKYK >Mature_706_residues GKWSDDILINASKESLIPLILELLKRTGFRESEKVSEEWGFDIVGIRDDPLSGTEKVLLKIHTSGMLSSKDVNVFADVLR THKADKGIIVVPYGVTRDARILISRDYKGLIVTWDRKKLISLFERYGIEPPEELLQKREEEPKKEEPKLKPIKLDAPLLF DVSAEDLFRKLMGFLSSRYPIKREVVSIEELKVKLSVGYILSWSANERKGKGVVLSKEEIVLDATEDEKLKNNVSKALLN DYSVITATDKEIDVTMTLTEAVVLFKEFAAKNLGLLESDISIVDRKRVYLPVEAYFKLKIGDNEGKATIDLKSGEINVEI TPLSQEYLVGKVKEIVVEKTGEEVKGVRTEERKGKIRVYGSTERFKFEFVVNVYTGEVLSEEIVLTDEAIVEIIKENYLG EIIGIERGKNTAIVDLLTQDGILIVEVDLGTGKIKEAKKLPTPEKGAEIARNVVIENFPIKNIEFKSYRILNHQYLEITL EGEDGKAIVKLEGERGEVLDYSVEISEKVASELVRNKYAGKIEVEKVEKDESSYIITGSLENHKVKIKVSKDGKILEEID RVLKEEVAKEKAIEAVKKVESEGVLESLELNDNWIVKFSGPNKVGTLILHRATGEVINRDVRFTELWIEKTFYEHLKRKY GESNLKTEWLIHHKDKGQVTIKVTGDNGIYYGKIDVKTGEIIEEDKAPKKGVLAKIKQLQLDAKYK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80091; Mature: 79960
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKWSDDILINASKESLIPLILELLKRTGFRESEKVSEEWGFDIVGIRDDPLSGTEKVLL CCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHCEEEEEECCCCCCCCEEEEE KIHTSGMLSSKDVNVFADVLRTHKADKGIIVVPYGVTRDARILISRDYKGLIVTWDRKKL EEECCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEECCCCEEEEEECHHHH ISLFERYGIEPPEELLQKREEEPKKEEPKLKPIKLDAPLLFDVSAEDLFRKLMGFLSSRY HHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCEEEECCCEEEECCHHHHHHHHHHHHHCCC PIKREVVSIEELKVKLSVGYILSWSANERKGKGVVLSKEEIVLDATEDEKLKNNVSKALL CCHHHHEEHHHEEEEEEEEEEEEECCCCCCCCEEEEECCEEEEECCCCHHHHHHHHHHHH NDYSVITATDKEIDVTMTLTEAVVLFKEFAAKNLGLLESDISIVDRKRVYLPVEAYFKLK CCCEEEEECCCCEEEEEEHHHHHHHHHHHHHCCCCCCCCCCCEECCCEEEEEEEEEEEEE IGDNEGKATIDLKSGEINVEITPLSQEYLVGKVKEIVVEKTGEEVKGVRTEERKGKIRVY EECCCCCEEEEEECCEEEEEEECCCHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCEEEEE GSTERFKFEFVVNVYTGEVLSEEIVLTDEAIVEIIKENYLGEIIGIERGKNTAIVDLLTQ ECCCEEEEEEEEEEEECCHHCCEEEECHHHHHHHHHHCCCCEEEEEECCCCEEEEEEEEC DGILIVEVDLGTGKIKEAKKLPTPEKGAEIARNVVIENFPIKNIEFKSYRILNHQYLEIT CCEEEEEEECCCCCCCHHHCCCCCCHHHHHHHHHEEECCCCCCEEECEEEEECEEEEEEE LEGEDGKAIVKLEGERGEVLDYSVEISEKVASELVRNKYAGKIEVEKVEKDESSYIITGS EECCCCEEEEEEECCCCCEEEEEEEHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEC LENHKVKIKVSKDGKILEEIDRVLKEEVAKEKAIEAVKKVESEGVLESLELNDNWIVKFS CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEC GPNKVGTLILHRATGEVINRDVRFTELWIEKTFYEHLKRKYGESNLKTEWLIHHKDKGQV CCCCEEEEEEEECCHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEE TIKVTGDNGIYYGKIDVKTGEIIEEDKAPKKGVLAKIKQLQLDAKYK EEEEECCCCEEEEEEEECCCCHHCCCCCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure GKWSDDILINASKESLIPLILELLKRTGFRESEKVSEEWGFDIVGIRDDPLSGTEKVLL CCCCCCEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHCEEEEEECCCCCCCCEEEEE KIHTSGMLSSKDVNVFADVLRTHKADKGIIVVPYGVTRDARILISRDYKGLIVTWDRKKL EEECCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEECCCCEEEEEECHHHH ISLFERYGIEPPEELLQKREEEPKKEEPKLKPIKLDAPLLFDVSAEDLFRKLMGFLSSRY HHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCEEEECCCEEEECCHHHHHHHHHHHHHCCC PIKREVVSIEELKVKLSVGYILSWSANERKGKGVVLSKEEIVLDATEDEKLKNNVSKALL CCHHHHEEHHHEEEEEEEEEEEEECCCCCCCCEEEEECCEEEEECCCCHHHHHHHHHHHH NDYSVITATDKEIDVTMTLTEAVVLFKEFAAKNLGLLESDISIVDRKRVYLPVEAYFKLK CCCEEEEECCCCEEEEEEHHHHHHHHHHHHHCCCCCCCCCCCEECCCEEEEEEEEEEEEE IGDNEGKATIDLKSGEINVEITPLSQEYLVGKVKEIVVEKTGEEVKGVRTEERKGKIRVY EECCCCCEEEEEECCEEEEEEECCCHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCEEEEE GSTERFKFEFVVNVYTGEVLSEEIVLTDEAIVEIIKENYLGEIIGIERGKNTAIVDLLTQ ECCCEEEEEEEEEEEECCHHCCEEEECHHHHHHHHHHCCCCEEEEEECCCCEEEEEEEEC DGILIVEVDLGTGKIKEAKKLPTPEKGAEIARNVVIENFPIKNIEFKSYRILNHQYLEIT CCEEEEEEECCCCCCCHHHCCCCCCHHHHHHHHHEEECCCCCCEEECEEEEECEEEEEEE LEGEDGKAIVKLEGERGEVLDYSVEISEKVASELVRNKYAGKIEVEKVEKDESSYIITGS EECCCCEEEEEEECCCCCEEEEEEEHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEC LENHKVKIKVSKDGKILEEIDRVLKEEVAKEKAIEAVKKVESEGVLESLELNDNWIVKFS CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEC GPNKVGTLILHRATGEVINRDVRFTELWIEKTFYEHLKRKYGESNLKTEWLIHHKDKGQV CCCCEEEEEEEECCHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEE TIKVTGDNGIYYGKIDVKTGEIIEEDKAPKKGVLAKIKQLQLDAKYK EEEEECCCCEEEEEEEECCCCHHCCCCCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA