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The map label for this gene is yejB [H]

Identifier: 18977373

GI number: 18977373

Start: 957770

End: 958801

Strand: Reverse

Name: yejB [H]

Synonym: PF1001

Alternate gene names: 18977373

Gene position: 958801-957770 (Counterclockwise)

Preceding gene: 18977386

Following gene: 18977372

Centisome position: 50.24

GC content: 37.89

Gene sequence:

>1032_bases
ATGAAATTTCCCACTAAAACTCTCATGAAAGTAGCGGCAGTTTACGCCTGTGTGTTTCTTGCAATAATCCTAGTTGCCGG
TATTACAGCAAATAGGCTAACCTGGGAGTACGTTAATGAGGCTGTCCTCACTTTTCAAGTAAAGAACCCGAGTTTTTATG
AAGAGCTCAAGCAAAATGCCACTAGAGAAGGCATAACTGTTGAAGAGTACTATTATCGTCTACTTGCGAAGGCAAAAGGG
ATTAGAGCTGATAATCTTCTTTTTATGGGTATTGACCTACTTAGAAAAAGTATTGCATACTATCGAGAAAATCCAAAACA
TGACATTATCCATGCAACAAAGGTTACCCTTATCGTTATGGGGCTTGCCATAGCCTTAATTATTATATTAGCGTTGTCAT
TAGGATTTAAGCTGGCAAATAGTCAATACCTGGGAACTGTTGAAGGACTGGCTCGGTTTTTTAGTGGAATCCCTTCTTGG
TGGGTCGGAGCAATTCTACTAGCTGTTTTTGCAGTTAAGATTAATATTTTTCCAGTTGGAGGTCTAAGAAGTTTCCCAAC
CGAAAAAGGCTTTTTGGCTTTTCTAGATTTTCTTTGGCACATTATTTTACCCATTGTTACATTGGTCCTCATTTATGTGT
GGGAATTCACGATAACTGTTGCTTATGAAGTTAGAAATGAAATTGGAAAGCCGTATATTCTTACAGAAAAAGCTAAAGGG
TTACCCGAGAAAGTAATATATTGGAAACACGTACTTAAAAATGTCTCCATAGTTCTAAGCTCTTTTACTGTTCAAAAATT
TATTGAGATGTTCACAGATTATATTGTCATAGACGTGCTCTTTAGCCTTGGTGGAATTGGAACGCTTTTTAAAGCGAGCT
TTGTTAGAACAGTTGTGCCAAATGTGGGGGTCGTGATAAGTTTTGACTATCGCCTCTTTTTTGTAGTTGCTCTCTTAATA
TCTGCCATATCTTTCATACTATCACTTCTGCTCGAACTCCTTAAAGGAATACTTGATCCGAGGGTGAGCTAA

Upstream 100 bases:

>100_bases
AATTTTCTCAAATCTAAATTTTCAAGCGGCTGAATACAAAAATACTTTTAATATGTAAAAAACTTTAAACAAAATGACGA
AACAAAGTAGAGGTAATGAG

Downstream 100 bases:

>100_bases
AATGAAGAGGAAAATCGGAGTAGTATTGCTTGTTCTCCTGGGTCTCTTTGTAGTTTTGTCAAATCTCAGTGTAAGTAGTG
ATGAAATTGCCAATTGGGTA

Product: oligopeptide transport system permease protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MKFPTKTLMKVAAVYACVFLAIILVAGITANRLTWEYVNEAVLTFQVKNPSFYEELKQNATREGITVEEYYYRLLAKAKG
IRADNLLFMGIDLLRKSIAYYRENPKHDIIHATKVTLIVMGLAIALIIILALSLGFKLANSQYLGTVEGLARFFSGIPSW
WVGAILLAVFAVKINIFPVGGLRSFPTEKGFLAFLDFLWHIILPIVTLVLIYVWEFTITVAYEVRNEIGKPYILTEKAKG
LPEKVIYWKHVLKNVSIVLSSFTVQKFIEMFTDYIVIDVLFSLGGIGTLFKASFVRTVVPNVGVVISFDYRLFFVVALLI
SAISFILSLLLELLKGILDPRVS

Sequences:

>Translated_343_residues
MKFPTKTLMKVAAVYACVFLAIILVAGITANRLTWEYVNEAVLTFQVKNPSFYEELKQNATREGITVEEYYYRLLAKAKG
IRADNLLFMGIDLLRKSIAYYRENPKHDIIHATKVTLIVMGLAIALIIILALSLGFKLANSQYLGTVEGLARFFSGIPSW
WVGAILLAVFAVKINIFPVGGLRSFPTEKGFLAFLDFLWHIILPIVTLVLIYVWEFTITVAYEVRNEIGKPYILTEKAKG
LPEKVIYWKHVLKNVSIVLSSFTVQKFIEMFTDYIVIDVLFSLGGIGTLFKASFVRTVVPNVGVVISFDYRLFFVVALLI
SAISFILSLLLELLKGILDPRVS
>Mature_343_residues
MKFPTKTLMKVAAVYACVFLAIILVAGITANRLTWEYVNEAVLTFQVKNPSFYEELKQNATREGITVEEYYYRLLAKAKG
IRADNLLFMGIDLLRKSIAYYRENPKHDIIHATKVTLIVMGLAIALIIILALSLGFKLANSQYLGTVEGLARFFSGIPSW
WVGAILLAVFAVKINIFPVGGLRSFPTEKGFLAFLDFLWHIILPIVTLVLIYVWEFTITVAYEVRNEIGKPYILTEKAKG
LPEKVIYWKHVLKNVSIVLSSFTVQKFIEMFTDYIVIDVLFSLGGIGTLFKASFVRTVVPNVGVVISFDYRLFFVVALLI
SAISFILSLLLELLKGILDPRVS

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788504, Length=187, Percent_Identity=31.5508021390374, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1787497, Length=246, Percent_Identity=27.2357723577236, Blast_Score=79, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 38639; Mature: 38639

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFPTKTLMKVAAVYACVFLAIILVAGITANRLTWEYVNEAVLTFQVKNPSFYEELKQNA
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCEEEEEEECCCHHHHHHHHCC
TREGITVEEYYYRLLAKAKGIRADNLLFMGIDLLRKSIAYYRENPKHDIIHATKVTLIVM
CCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
GLAIALIIILALSLGFKLANSQYLGTVEGLARFFSGIPSWWVGAILLAVFAVKINIFPVG
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEECC
GLRSFPTEKGFLAFLDFLWHIILPIVTLVLIYVWEFTITVAYEVRNEIGKPYILTEKAKG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHCC
LPEKVIYWKHVLKNVSIVLSSFTVQKFIEMFTDYIVIDVLFSLGGIGTLFKASFVRTVVP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
NVGVVISFDYRLFFVVALLISAISFILSLLLELLKGILDPRVS
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKFPTKTLMKVAAVYACVFLAIILVAGITANRLTWEYVNEAVLTFQVKNPSFYEELKQNA
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCEEEEEEECCCHHHHHHHHCC
TREGITVEEYYYRLLAKAKGIRADNLLFMGIDLLRKSIAYYRENPKHDIIHATKVTLIVM
CCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
GLAIALIIILALSLGFKLANSQYLGTVEGLARFFSGIPSWWVGAILLAVFAVKINIFPVG
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEECC
GLRSFPTEKGFLAFLDFLWHIILPIVTLVLIYVWEFTITVAYEVRNEIGKPYILTEKAKG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHCC
LPEKVIYWKHVLKNVSIVLSSFTVQKFIEMFTDYIVIDVLFSLGGIGTLFKASFVRTVVP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
NVGVVISFDYRLFFVVALLISAISFILSLLLELLKGILDPRVS
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]