Click here to switch to the map view.

The map label for this gene is porD

Identifier: 18977339

GI number: 18977339

Start: 927581

End: 927898

Strand: Reverse

Name: porD

Synonym: PF0967

Alternate gene names: NA

Gene position: 927898-927581 (Counterclockwise)

Preceding gene: 18977340

Following gene: 18977338

Centisome position: 48.63

GC content: 40.57

Gene sequence:

>318_bases
ATGGCTGAAAGTCCGTTTAAGGCCGATATAGAAAGAGCCCAAAAAGAGTTAAGTGAAAAAATGACACCCGGAGCAATAGT
CTACATTCCAGGAAGTAGCGTCATTAATAAAACTGGATCTTGGAGAGTTTTTAAGCCAGAGTTCAACAGGGACAAGTGTG
TAAGGTGTTATCTCTGCTACATCTACTGTCCAGAGCCTGCAATATACCTAGATGAAGAAGGTTACCCAGTTTTTGACTAC
GACTATTGTAAGGGTTGTGGAATCTGTGCTAATGAGTGTCCAACAAAAGCCATTGAAATGGTTAGAGAAGTTAAGTGA

Upstream 100 bases:

>100_bases
GGTATTGGAAGAATGGGAAAGGCTAAAGAAGCTTGCCGAGGTCTTTGGATGACCTATATGCTTAAATTTTTATTTTGAAA
ACTCACTCGAGGTGGTAAAT

Downstream 100 bases:

>100_bases
GGTGGTTTAGATGCCAATTAGGAAAGTTATGAAGGCTAATGAAGCCGCTGCTTGGGCTGCTAAGTTGGCTAAACCAAAGG
TTATAGCAGCATTCCCAATT

Product: pyuvate ferredoxin oxidoreductase subunit delta

Products: acetyl-CoA; CO2; reduced ferredoxin

Alternate protein names: Pyruvate oxidoreductase delta chain; POR; Pyruvic-ferredoxin oxidoreductase subunit delta [H]

Number of amino acids: Translated: 105; Mature: 104

Protein sequence:

>105_residues
MAESPFKADIERAQKELSEKMTPGAIVYIPGSSVINKTGSWRVFKPEFNRDKCVRCYLCYIYCPEPAIYLDEEGYPVFDY
DYCKGCGICANECPTKAIEMVREVK

Sequences:

>Translated_105_residues
MAESPFKADIERAQKELSEKMTPGAIVYIPGSSVINKTGSWRVFKPEFNRDKCVRCYLCYIYCPEPAIYLDEEGYPVFDY
DYCKGCGICANECPTKAIEMVREVK
>Mature_104_residues
AESPFKADIERAQKELSEKMTPGAIVYIPGSSVINKTGSWRVFKPEFNRDKCVRCYLCYIYCPEPAIYLDEEGYPVFDYD
YCKGCGICANECPTKAIEMVREVK

Specific function: Unknown

COG id: COG1144

COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR011898 [H]

Pfam domain/function: PF00037 Fer4 [H]

EC number: 1.2.7.1

Molecular weight: Translated: 12012; Mature: 11881

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
10.5 %Cys+Met (Translated Protein)
7.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
9.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAESPFKADIERAQKELSEKMTPGAIVYIPGSSVINKTGSWRVFKPEFNRDKCVRCYLCY
CCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCHHCCCCCCEEEECCCCCCCCEEEEEEEE
IYCPEPAIYLDEEGYPVFDYDYCKGCGICANECPTKAIEMVREVK
EECCCCEEEECCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
AESPFKADIERAQKELSEKMTPGAIVYIPGSSVINKTGSWRVFKPEFNRDKCVRCYLCY
CCCCCHHHHHHHHHHHHHCCCCCEEEEECCCHHCCCCCCEEEECCCCCCCCEEEEEEEE
IYCPEPAIYLDEEGYPVFDYDYCKGCGICANECPTKAIEMVREVK
EECCCCEEEECCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: pyruvate; CoA; oxidized ferredoxin

Specific reaction: pyruvate + CoA + oxidized ferredoxin = acetyl-CoA + CO2 + reduced ferredoxin

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]