| Definition | Pyrococcus furiosus DSM 3638, complete genome. |
|---|---|
| Accession | NC_003413 |
| Length | 1,908,256 |
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The map label for this gene is porA
Identifier: 18977338
GI number: 18977338
Start: 926380
End: 927570
Strand: Reverse
Name: porA
Synonym: PF0966
Alternate gene names: 18977338
Gene position: 927570-926380 (Counterclockwise)
Preceding gene: 18977339
Following gene: 18977337
Centisome position: 48.61
GC content: 44.25
Gene sequence:
>1191_bases ATGCCAATTAGGAAAGTTATGAAGGCTAATGAAGCCGCTGCTTGGGCTGCTAAGTTGGCTAAACCAAAGGTTATAGCAGC ATTCCCAATTACACCTTCAACCCTAATACCCGAGAAGATTAGTGAATTCGTGGCAAATGGTGAACTAGACGCAGAGTTTA TTAAAGTTGAAAGTGAGCACTCAGCAATTTCAGCATGTGTAGGTGCGGCTGCTGCAGGTGTTAGAACCTTCACAGCAACA GCCTCTCAAGGTTTGGCTTTAATGCACGAAATTCTATTCATTGCTGCTGGCATGAGATTGCCAATTGTAATGGCAATTGG TAACAGAGCTTTGTCAGCTCCAATTAACATCTGGAATGACTGGCAAGACACAATTAGCCAAAGAGATACTGGATGGATGC AGTTCTATGCAGAAAACAACCAAGAGGCTCTAGACTTGATCCTAATAGCTTACAAAGTTGCAGAAGATGAAAGAGTCCTC CTTCCAGCCATGGTTGGATTCGATGCATTCATCCTAACCCATACAGTTGAACCAGTAGAAATCCCAGACCAAGAGGTTGT TGATGAATTCCTAGGAGAATACGAGCCCAAGCACGCATATATTGATCCCGCAAGGCCTATAACTCAAGGAAGCCTTGCAT TCCCGGCCCACTATATGGAGAGCAGATACACAGTTTGGGAGGCTATGGAGAGAGCAAAGAAGGTAATAGACGAAGCATTT GCAGAATTCGAGAAGAAGTTCGGAAGAAAGTACCAGAAGATTGAGGAGTACAAGACAGAGGATGCAGACATAATCTTCGT AACAATGGGTTCACTGGCTGGAACCCTTAAAGAGTGGATAGACAAGAAGAGAGAGGAAGGTTACAAAGTCGGTGCAGCAA AGATAACCGTTTATAGGCCATTCCCAGTAGAAGAGATAAGAGAACTAGCAAAGAAGGCAAAGGTTCTCGCATTCCTAGAG AAGAACATCACAATCGGCCTTTATGGTGCAGTCTTTACGGATGCATCAGCAGCTCTCATCAACGAGAGCGAAAAGCCACT AATGGTCGACTTCATAGTTGGCCTAGGTGGAAGAGATGTAACCTTCAACCAGCTTGACGAAGCCCTGGAAATTGCAGAGA AGGCACTCAAGGAAGGTAAAGTTGAGAATCCAATTAACTGGATTGGATTAAGATGGGAACTTGTGAAGTGA
Upstream 100 bases:
>100_bases GTTTTTGACTACGACTATTGTAAGGGTTGTGGAATCTGTGCTAATGAGTGTCCAACAAAAGCCATTGAAATGGTTAGAGA AGTTAAGTGAGGTGGTTTAG
Downstream 100 bases:
>100_bases GGTGATTGAGATGGCAGTTAGAAAGCCCCCAATAACTACCCGTGAATATTGGGCTCCTGGTCATGCCGCATGTGCAGGTT GTGGGTGTGCTACTGCTCTA
Product: pyruvate ferredoxin oxidoreductase subunit alpha
Products: NA
Alternate protein names: Pyruvate oxidoreductase alpha chain; POR; Pyruvic-ferredoxin oxidoreductase subunit alpha
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MPIRKVMKANEAAAWAAKLAKPKVIAAFPITPSTLIPEKISEFVANGELDAEFIKVESEHSAISACVGAAAAGVRTFTAT ASQGLALMHEILFIAAGMRLPIVMAIGNRALSAPINIWNDWQDTISQRDTGWMQFYAENNQEALDLILIAYKVAEDERVL LPAMVGFDAFILTHTVEPVEIPDQEVVDEFLGEYEPKHAYIDPARPITQGSLAFPAHYMESRYTVWEAMERAKKVIDEAF AEFEKKFGRKYQKIEEYKTEDADIIFVTMGSLAGTLKEWIDKKREEGYKVGAAKITVYRPFPVEEIRELAKKAKVLAFLE KNITIGLYGAVFTDASAALINESEKPLMVDFIVGLGGRDVTFNQLDEALEIAEKALKEGKVENPINWIGLRWELVK
Sequences:
>Translated_396_residues MPIRKVMKANEAAAWAAKLAKPKVIAAFPITPSTLIPEKISEFVANGELDAEFIKVESEHSAISACVGAAAAGVRTFTAT ASQGLALMHEILFIAAGMRLPIVMAIGNRALSAPINIWNDWQDTISQRDTGWMQFYAENNQEALDLILIAYKVAEDERVL LPAMVGFDAFILTHTVEPVEIPDQEVVDEFLGEYEPKHAYIDPARPITQGSLAFPAHYMESRYTVWEAMERAKKVIDEAF AEFEKKFGRKYQKIEEYKTEDADIIFVTMGSLAGTLKEWIDKKREEGYKVGAAKITVYRPFPVEEIRELAKKAKVLAFLE KNITIGLYGAVFTDASAALINESEKPLMVDFIVGLGGRDVTFNQLDEALEIAEKALKEGKVENPINWIGLRWELVK >Mature_395_residues PIRKVMKANEAAAWAAKLAKPKVIAAFPITPSTLIPEKISEFVANGELDAEFIKVESEHSAISACVGAAAAGVRTFTATA SQGLALMHEILFIAAGMRLPIVMAIGNRALSAPINIWNDWQDTISQRDTGWMQFYAENNQEALDLILIAYKVAEDERVLL PAMVGFDAFILTHTVEPVEIPDQEVVDEFLGEYEPKHAYIDPARPITQGSLAFPAHYMESRYTVWEAMERAKKVIDEAFA EFEKKFGRKYQKIEEYKTEDADIIFVTMGSLAGTLKEWIDKKREEGYKVGAAKITVYRPFPVEEIRELAKKAKVLAFLEK NITIGLYGAVFTDASAALINESEKPLMVDFIVGLGGRDVTFNQLDEALEIAEKALKEGKVENPINWIGLRWELVK
Specific function: Oxidoreductase Required For The Transfer Of Electrons From Pyruvate To Flavodoxin (Potential). [C]
COG id: COG0674
COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787642, Length=352, Percent_Identity=29.8295454545455, Blast_Score=135, Evalue=6e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PORA_PYRFU (Q51804)
Other databases:
- EMBL: X85250 - EMBL: AE009950 - PIR: T45088 - RefSeq: NP_578695.1 - ProteinModelPortal: Q51804 - EnsemblBacteria: EBPYRT00000005763 - GeneID: 1468831 - GenomeReviews: AE009950_GR - KEGG: pfu:PF0966 - NMPDR: fig|186497.1.peg.1002 - GeneTree: EBGT00050000022252 - HOGENOM: HBG313202 - OMA: ESEHAAM - ProtClustDB: PRK08367 - BRENDA: 1.2.7.1 - InterPro: IPR002880 - InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005476 - Gene3D: G3DSA:3.40.50.920
Pfam domain/function: PF01855 POR_N; PF02780 Transketolase_C; SSF52922 Transketo_C_like
EC number: =1.2.7.1
Molecular weight: Translated: 44177; Mature: 44046
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIRKVMKANEAAAWAAKLAKPKVIAAFPITPSTLIPEKISEFVANGELDAEFIKVESEH CCHHHHHHCCHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCHHHEEEECHH SAISACVGAAAAGVRTFTATASQGLALMHEILFIAAGMRLPIVMAIGNRALSAPINIWND HHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHCCCCCCCCC WQDTISQRDTGWMQFYAENNQEALDLILIAYKVAEDERVLLPAMVGFDAFILTHTVEPVE HHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCCCC IPDQEVVDEFLGEYEPKHAYIDPARPITQGSLAFPAHYMESRYTVWEAMERAKKVIDEAF CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AEFEKKFGRKYQKIEEYKTEDADIIFVTMGSLAGTLKEWIDKKREEGYKVGAAKITVYRP HHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCEECEEEEEEECC FPVEEIRELAKKAKVLAFLEKNITIGLYGAVFTDASAALINESEKPLMVDFIVGLGGRDV CCHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHCCHHHHHCCCCCCEEEEEEECCCCCCC TFNQLDEALEIAEKALKEGKVENPINWIGLRWELVK CHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECC >Mature Secondary Structure PIRKVMKANEAAAWAAKLAKPKVIAAFPITPSTLIPEKISEFVANGELDAEFIKVESEH CHHHHHHCCHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCHHHEEEECHH SAISACVGAAAAGVRTFTATASQGLALMHEILFIAAGMRLPIVMAIGNRALSAPINIWND HHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHCCCCCCCCC WQDTISQRDTGWMQFYAENNQEALDLILIAYKVAEDERVLLPAMVGFDAFILTHTVEPVE HHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCCCC IPDQEVVDEFLGEYEPKHAYIDPARPITQGSLAFPAHYMESRYTVWEAMERAKKVIDEAF CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AEFEKKFGRKYQKIEEYKTEDADIIFVTMGSLAGTLKEWIDKKREEGYKVGAAKITVYRP HHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCEECEEEEEEECC FPVEEIRELAKKAKVLAFLEKNITIGLYGAVFTDASAALINESEKPLMVDFIVGLGGRDV CCHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHCCHHHHHCCCCCCEEEEEEECCCCCCC TFNQLDEALEIAEKALKEGKVENPINWIGLRWELVK CHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8550425; 8305426; 8380721