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The map label for this gene is ychE [C]

Identifier: 18977117

GI number: 18977117

Start: 742393

End: 743028

Strand: Reverse

Name: ychE [C]

Synonym: PF0745

Alternate gene names: 18977117

Gene position: 743028-742393 (Counterclockwise)

Preceding gene: 18977119

Following gene: 18977116

Centisome position: 38.94

GC content: 38.99

Gene sequence:

>636_bases
ATGGAAGTTCTAAAAGACTTTTTACTCTTTTATGGAGGTCTTTTCGCGATAACTAATCCAATAGGGGCTGTTCCAGTGTT
TATAGCTGTAACTAGAAATTTAAGTCCAGAGAAGAGAAAGGAAATAGCAAGGAAAACTTCCACTACAGTTATGGTAACTC
TCTTAGTCTTTGCTCTAGTGGGGGAGTGGATTTTCAAGTTCTTCGGAGCATCTACAGATGCATTTTCAATAGCAGGAGGG
ATAATTCTCTTTAGAATGTCTCTAGAGATGCTCTCAGGAAAGCTTTCTTCCGTAAAAATAAGTGAAGAAGAAGAACATAT
CAGTGAAGAAGCTGTAACACTTGAGGAAGTGGCTATAATTCCACTCGCGATTCCTTTACTTTCAGGCCCAGGTGCCATAA
CCACCACAATGCTCTACATGGCTAAGAGCTCTACAATGATTGAAAAATCTATAGTGCTACTAGTAGTGGTAGCAATAGGG
ATTACAGTGTGGATAATTCTTTCAGCCGCTAACAGAATACATCAAAAGTTGGGAACCATTGGGATTAAGGTAATGACAAG
AATGATGGGTCTTATTTTGGCATCAATGGCAGTTCAAATGGTTATAAATGGTGTCAAAGGAGCGTTCAACATTTAG

Upstream 100 bases:

>100_bases
ATGTATGAGGCAAGATTTGAGATAAAGTTTTCAAACATCTGTCATCCCCAGGAGAAAAAAGAATTTTAAACTTAAAAGGT
TACTGAAAAGGGTGATACTC

Downstream 100 bases:

>100_bases
CTTTTTCTAATCCTCTAATCTTATTTAATAACAATATTTATAAACAGATAATACAACTGTCATGCTTATTCGCCGGATCC
CATAGTAAAACTTTTTTAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MEVLKDFLLFYGGLFAITNPIGAVPVFIAVTRNLSPEKRKEIARKTSTTVMVTLLVFALVGEWIFKFFGASTDAFSIAGG
IILFRMSLEMLSGKLSSVKISEEEEHISEEAVTLEEVAIIPLAIPLLSGPGAITTTMLYMAKSSTMIEKSIVLLVVVAIG
ITVWIILSAANRIHQKLGTIGIKVMTRMMGLILASMAVQMVINGVKGAFNI

Sequences:

>Translated_211_residues
MEVLKDFLLFYGGLFAITNPIGAVPVFIAVTRNLSPEKRKEIARKTSTTVMVTLLVFALVGEWIFKFFGASTDAFSIAGG
IILFRMSLEMLSGKLSSVKISEEEEHISEEAVTLEEVAIIPLAIPLLSGPGAITTTMLYMAKSSTMIEKSIVLLVVVAIG
ITVWIILSAANRIHQKLGTIGIKVMTRMMGLILASMAVQMVINGVKGAFNI
>Mature_211_residues
MEVLKDFLLFYGGLFAITNPIGAVPVFIAVTRNLSPEKRKEIARKTSTTVMVTLLVFALVGEWIFKFFGASTDAFSIAGG
IILFRMSLEMLSGKLSSVKISEEEEHISEEAVTLEEVAIIPLAIPLLSGPGAITTTMLYMAKSSTMIEKSIVLLVVVAIG
ITVWIILSAANRIHQKLGTIGIKVMTRMMGLILASMAVQMVINGVKGAFNI

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family [H]

Homologues:

Organism=Escherichia coli, GI1787494, Length=203, Percent_Identity=33.0049261083744, Blast_Score=128, Evalue=3e-31,
Organism=Escherichia coli, GI1789842, Length=197, Percent_Identity=31.9796954314721, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1787809, Length=198, Percent_Identity=28.2828282828283, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002771 [H]

Pfam domain/function: PF01914 MarC [H]

EC number: NA

Molecular weight: Translated: 22808; Mature: 22808

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: PS00589 PTS_HPR_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVLKDFLLFYGGLFAITNPIGAVPVFIAVTRNLSPEKRKEIARKTSTTVMVTLLVFALV
CHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GEWIFKFFGASTDAFSIAGGIILFRMSLEMLSGKLSSVKISEEEEHISEEAVTLEEVAII
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHEEECCHHHHHHHHHHHHHHHHHH
PLAIPLLSGPGAITTTMLYMAKSSTMIEKSIVLLVVVAIGITVWIILSAANRIHQKLGTI
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIKVMTRMMGLILASMAVQMVINGVKGAFNI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MEVLKDFLLFYGGLFAITNPIGAVPVFIAVTRNLSPEKRKEIARKTSTTVMVTLLVFALV
CHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GEWIFKFFGASTDAFSIAGGIILFRMSLEMLSGKLSSVKISEEEEHISEEAVTLEEVAII
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHEEECCHHHHHHHHHHHHHHHHHH
PLAIPLLSGPGAITTTMLYMAKSSTMIEKSIVLLVVVAIGITVWIILSAANRIHQKLGTI
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIKVMTRMMGLILASMAVQMVINGVKGAFNI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]