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The map label for this gene is asnC [C]

Identifier: 18977111

GI number: 18977111

Start: 735280

End: 736080

Strand: Reverse

Name: asnC [C]

Synonym: PF0739

Alternate gene names: 18977111

Gene position: 736080-735280 (Counterclockwise)

Preceding gene: 18977116

Following gene: 18977110

Centisome position: 38.57

GC content: 41.32

Gene sequence:

>801_bases
ATGGTTTTAACGCACATTGCACATGTCATACCATTAACTTTAAGAGTGATCTTCACTTTCGTCACCAATATTTACTTTGT
GACGAAACTTAATGGGTATTATTCATGCCAAAATGTAAACACTAACCAAATGTTTTTTATATTTTGGCAACTAATACTCC
CAGGGAATGGGGGTGTTGGAATGACCAAGTTAGATGATTTGGATCTAAAGCTCATATACCTTTTAATGGACGATGCAAGG
CTAAGTATATCTGAGCTGGCCGATAGGCTCGGAGTTAGCAGACCTACGATAAGATCTAGACTAGAAAAGCTCGAAAAGGA
AGGGATAATCCAAGGCTACACCATAAAGCTAAACCCGGAACTTCAGAGGGCTCACAATGTAGTTGCTCTAGTTGTCAAAA
CGGAGAACCCAGAGAAGATGGATGAGTTCGAGGAGATAATCGAGATAAACCGCTTTACAAGCACGAAGTACCTCATAAAA
GTCGCTGTGGAAAATATGGAAGACTTCAGGCGGGTTATTGAGGGTACTGGTGTGGAGGTCATTGAGATAATGCCAATCCT
TGAGACCAGAGAAAAGAAGCTCAAACCAAAAATAAAGGTGCCCTTCAAGTGCGACTACTGCGGAAAGGAAATCGTTGGAG
AACCTATAGTTTACAAGTACCATAACAAAGTCTACTTCTTCTGCTGTCCAACTTGCTTTAGAGAGTTCAAGAAGGCAAGG
GAAAATTTAGAGAAAGTTAAACTACCCAAGGAACAGAAGGTAAAGGATGCTCACGAACACGAGCACCATGCCCATGGCTA
A

Upstream 100 bases:

>100_bases
TAGGCTAACTTTTGACTCATCAAAGTCAACAAAGACGGTCTCATTGTTTAGATTTGCCTTTGCAACTTTAACCCCCTCCA
ATTCAGTTAAAGCCATCTCT

Downstream 100 bases:

>100_bases
GTCCCCTCTTCCACTCATTTTTGAGAGTTTGTTGACAGCTTCGCCGAGCTTTGCATATCTGCTTCTAGAGTGGAACCCCA
ACGTAACTAATGCCGAGGGA

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MVLTHIAHVIPLTLRVIFTFVTNIYFVTKLNGYYSCQNVNTNQMFFIFWQLILPGNGGVGMTKLDDLDLKLIYLLMDDAR
LSISELADRLGVSRPTIRSRLEKLEKEGIIQGYTIKLNPELQRAHNVVALVVKTENPEKMDEFEEIIEINRFTSTKYLIK
VAVENMEDFRRVIEGTGVEVIEIMPILETREKKLKPKIKVPFKCDYCGKEIVGEPIVYKYHNKVYFFCCPTCFREFKKAR
ENLEKVKLPKEQKVKDAHEHEHHAHG

Sequences:

>Translated_266_residues
MVLTHIAHVIPLTLRVIFTFVTNIYFVTKLNGYYSCQNVNTNQMFFIFWQLILPGNGGVGMTKLDDLDLKLIYLLMDDAR
LSISELADRLGVSRPTIRSRLEKLEKEGIIQGYTIKLNPELQRAHNVVALVVKTENPEKMDEFEEIIEINRFTSTKYLIK
VAVENMEDFRRVIEGTGVEVIEIMPILETREKKLKPKIKVPFKCDYCGKEIVGEPIVYKYHNKVYFFCCPTCFREFKKAR
ENLEKVKLPKEQKVKDAHEHEHHAHG
>Mature_266_residues
MVLTHIAHVIPLTLRVIFTFVTNIYFVTKLNGYYSCQNVNTNQMFFIFWQLILPGNGGVGMTKLDDLDLKLIYLLMDDAR
LSISELADRLGVSRPTIRSRLEKLEKEGIIQGYTIKLNPELQRAHNVVALVVKTENPEKMDEFEEIIEINRFTSTKYLIK
VAVENMEDFRRVIEGTGVEVIEIMPILETREKKLKPKIKVPFKCDYCGKEIVGEPIVYKYHNKVYFFCCPTCFREFKKAR
ENLEKVKLPKEQKVKDAHEHEHHAHG

Specific function: Activator Of Asna Transcription; Autogenous Regulator Of Its Own Transcription; And Repressor Of The Expression Of Gida At A Post-Transcriptional Level. [C]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR013196
- InterPro:   IPR000485
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg; PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 30992; Mature: 30992

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLTHIAHVIPLTLRVIFTFVTNIYFVTKLNGYYSCQNVNTNQMFFIFWQLILPGNGGVG
CHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCEEEECCCCCCHHEEEEEEHHCCCCCCCC
MTKLDDLDLKLIYLLMDDARLSISELADRLGVSRPTIRSRLEKLEKEGIIQGYTIKLNPE
CCEECCCCCEEEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCEECEEEEECCH
LQRAHNVVALVVKTENPEKMDEFEEIIEINRFTSTKYLIKVAVENMEDFRRVIEGTGVEV
HHHCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEE
IEIMPILETREKKLKPKIKVPFKCDYCGKEIVGEPIVYKYHNKVYFFCCPTCFREFKKAR
EEEEHHHHHHHHHCCCCEECCEECCCCCHHHCCCCEEEEECCEEEEEECHHHHHHHHHHH
ENLEKVKLPKEQKVKDAHEHEHHAHG
HHHHHHCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVLTHIAHVIPLTLRVIFTFVTNIYFVTKLNGYYSCQNVNTNQMFFIFWQLILPGNGGVG
CHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCEEEECCCCCCHHEEEEEEHHCCCCCCCC
MTKLDDLDLKLIYLLMDDARLSISELADRLGVSRPTIRSRLEKLEKEGIIQGYTIKLNPE
CCEECCCCCEEEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCEECEEEEECCH
LQRAHNVVALVVKTENPEKMDEFEEIIEINRFTSTKYLIKVAVENMEDFRRVIEGTGVEV
HHHCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEE
IEIMPILETREKKLKPKIKVPFKCDYCGKEIVGEPIVYKYHNKVYFFCCPTCFREFKKAR
EEEEHHHHHHHHHCCCCEECCEECCCCCHHHCCCCEEEEECCEEEEEECHHHHHHHHHHH
ENLEKVKLPKEQKVKDAHEHEHHAHG
HHHHHHCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA