| Definition | Pyrococcus furiosus DSM 3638, complete genome. |
|---|---|
| Accession | NC_003413 |
| Length | 1,908,256 |
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The map label for this gene is 18976932
Identifier: 18976932
GI number: 18976932
Start: 577963
End: 578865
Strand: Reverse
Name: 18976932
Synonym: PF0560
Alternate gene names: NA
Gene position: 578865-577963 (Counterclockwise)
Preceding gene: 18976936
Following gene: 18976929
Centisome position: 30.33
GC content: 35.22
Gene sequence:
>903_bases ATGAAAGTAGTAGGAATTAAGGGAAGTGTCTCATATCTACAAGCTTTAAAATATCTAAAAACTAAGAAAGTCACCAAAAG ACTTAAAGAAATAGAAAAATTAGTCGACACTCTAATAACCCTGGCTCCCTATGCCCCAGAAGGATCAAAAATAGAAACAA TAAGGAAAAATTACGCAAAAATAAGTTTCAATAAAATTAAGACAGTGTCGAGATCTAAAATTGGATCCCCTAGAATAAAG AGCATTATGTTACTACTGTGGAACTTTGGATTACTAGATGTAAAGATTATAGAGAATTCATGGTATGTGAGAAAAACTAA ACTCGCTTCATTGCTGGAAGAGAATTTTAAGGACTTAAGCCCCTCAGAGAAATTAAAGGTATATCTTCTCGGAGGATTGT TAGTAGACACACCTGCTCGCTTTGTTTATAGGTGTACTCTCAACGGAGTAGAGGACTATAAGGGTGTAAAAAAGGCTATT CTAGGCTATTTATCGGATCAAAGAAGCAATTCTCTTATTATTGGTCTGTCTAACATGTTGGAAAGCATAAAGTTTATTGA AGAGGCCCAAGCCTACAGTGGAAAAAAAGAATACATCGGATTGGTAGATGTAGCGTTTTATGGTCTGTCAGGACTTTATT TGGATGTCAAGCGCGAGAGCGGAAAGTTAACAGTTAAACCAAACTTCAGAGAACTAAGGGCTTTATATGAAATTGATAAG AGCGTGGCTACTGGATCTGATTATGGATTAAGCATATCCAAGGAGATACTAGAAAATCTAGCCAACACAAAAAGAAGAAA AACAATATTTTCAGAAGAAGTCCAAGAACTGCTCGTGAATGTAATTAAGGAGAACGCTATTAGTATATCCCAAGACCTGC AAAATATGTATGGAATAATTTAA
Upstream 100 bases:
>100_bases TAATTCACCTCATAACTAACTATTGTTATAATAGCTCTTAAATACTTTCCGATAGAGTTAAATTCCTAGACATGGAATTT AGGAAAACGGAGGGATGTCG
Downstream 100 bases:
>100_bases GAAAAAAAGGAAGGCCTAGGTAGAGACAAACTAAATGCTCAAATCTTCCCTATTTAAGTATCCTTCCAAGTACAATCCTC CCAGGAAGGCCTGGCCTACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MKVVGIKGSVSYLQALKYLKTKKVTKRLKEIEKLVDTLITLAPYAPEGSKIETIRKNYAKISFNKIKTVSRSKIGSPRIK SIMLLLWNFGLLDVKIIENSWYVRKTKLASLLEENFKDLSPSEKLKVYLLGGLLVDTPARFVYRCTLNGVEDYKGVKKAI LGYLSDQRSNSLIIGLSNMLESIKFIEEAQAYSGKKEYIGLVDVAFYGLSGLYLDVKRESGKLTVKPNFRELRALYEIDK SVATGSDYGLSISKEILENLANTKRRKTIFSEEVQELLVNVIKENAISISQDLQNMYGII
Sequences:
>Translated_300_residues MKVVGIKGSVSYLQALKYLKTKKVTKRLKEIEKLVDTLITLAPYAPEGSKIETIRKNYAKISFNKIKTVSRSKIGSPRIK SIMLLLWNFGLLDVKIIENSWYVRKTKLASLLEENFKDLSPSEKLKVYLLGGLLVDTPARFVYRCTLNGVEDYKGVKKAI LGYLSDQRSNSLIIGLSNMLESIKFIEEAQAYSGKKEYIGLVDVAFYGLSGLYLDVKRESGKLTVKPNFRELRALYEIDK SVATGSDYGLSISKEILENLANTKRRKTIFSEEVQELLVNVIKENAISISQDLQNMYGII >Mature_300_residues MKVVGIKGSVSYLQALKYLKTKKVTKRLKEIEKLVDTLITLAPYAPEGSKIETIRKNYAKISFNKIKTVSRSKIGSPRIK SIMLLLWNFGLLDVKIIENSWYVRKTKLASLLEENFKDLSPSEKLKVYLLGGLLVDTPARFVYRCTLNGVEDYKGVKKAI LGYLSDQRSNSLIIGLSNMLESIKFIEEAQAYSGKKEYIGLVDVAFYGLSGLYLDVKRESGKLTVKPNFRELRALYEIDK SVATGSDYGLSISKEILENLANTKRRKTIFSEEVQELLVNVIKENAISISQDLQNMYGII
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33915; Mature: 33915
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVVGIKGSVSYLQALKYLKTKKVTKRLKEIEKLVDTLITLAPYAPEGSKIETIRKNYAK CEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH ISFNKIKTVSRSKIGSPRIKSIMLLLWNFGLLDVKIIENSWYVRKTKLASLLEENFKDLS EEHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCC PSEKLKVYLLGGLLVDTPARFVYRCTLNGVEDYKGVKKAILGYLSDQRSNSLIIGLSNML CCCCEEEEEECCCHHCCCHHEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHH ESIKFIEEAQAYSGKKEYIGLVDVAFYGLSGLYLDVKRESGKLTVKPNFRELRALYEIDK HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEECCCEEEECCCHHHHHHHHHHHH SVATGSDYGLSISKEILENLANTKRRKTIFSEEVQELLVNVIKENAISISQDLQNMYGII HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKVVGIKGSVSYLQALKYLKTKKVTKRLKEIEKLVDTLITLAPYAPEGSKIETIRKNYAK CEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH ISFNKIKTVSRSKIGSPRIKSIMLLLWNFGLLDVKIIENSWYVRKTKLASLLEENFKDLS EEHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCC PSEKLKVYLLGGLLVDTPARFVYRCTLNGVEDYKGVKKAILGYLSDQRSNSLIIGLSNML CCCCEEEEEECCCHHCCCHHEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHH ESIKFIEEAQAYSGKKEYIGLVDVAFYGLSGLYLDVKRESGKLTVKPNFRELRALYEIDK HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEECCCEEEECCCHHHHHHHHHHHH SVATGSDYGLSISKEILENLANTKRRKTIFSEEVQELLVNVIKENAISISQDLQNMYGII HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA