| Definition | Pyrococcus furiosus DSM 3638, complete genome. |
|---|---|
| Accession | NC_003413 |
| Length | 1,908,256 |
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The map label for this gene is 18976887
Identifier: 18976887
GI number: 18976887
Start: 535571
End: 536374
Strand: Direct
Name: 18976887
Synonym: PF0515
Alternate gene names: NA
Gene position: 535571-536374 (Clockwise)
Preceding gene: 18976884
Following gene: 18976888
Centisome position: 28.07
GC content: 39.05
Gene sequence:
>804_bases ATGAAAAAATCTTTGATAGTATTTTTTGCCATTCTAGTGGTAATGGGCATATTGTATGGTTCAACTACTGGAAGGGTAAG AAGTGCATTTAGTAGTTCTATCTTGAGCGCTCTTTTTTTATGGATGTCCCTAATATCCTTAATTTTTCTTGCCTTGCTGT TGATAGCATTTGTTATTCTGGTTCGTGAAAAGGATCTGGAGGCAAGAGGGCATTTAAGGGCTAGCCTTGCATTTTTGAAA TATTGGTTGATTGTTGCAGCTGCTCTCTTTTTGTACGCATCGTTTTATCTTTCAAAGCTCTTCAAGGTTAAAGAAATGGA AAACATTACTCAAACAACAGACCATGTAGTTGTTCCTCCTTCCTTTTTTGAGACACCCTCAGAGGCAACTCTTGCTTCGG TTTTTGTCTACATCCCAATAATATTCTTTGCAATAATCTTCGTCTTGGCACTTCTTTCAATGGGGCGAGATGTGAATGAA TTAAGAAAAACGAGACAAATTAAAAGGGAGCTTGAGGCCTTTGATAAAAAGGTTGATGATCTTGGTGTAGATGCATTTTC TGATCCTAGGGAGGCAGTGATAGAATTTTATCGTAAAGCTGTCTTATGGTTGGAAATCCTGGGAATTCCCTATCGGGAAA GTTGGACTCACTGGGAACATGCGAAGAAAGTTGAATATAAGAAGAAGGCTTATGTCGAACTTGCTAGACTCTTTGAAAAG GCCAAGTATGCGCCTGAAAAGGTAACTATGGATGACGCAAGGAGGGCATATGAACTGTACAAGGTGATTAAGGGTGAGAG TTGA
Upstream 100 bases:
>100_bases TGTAAGATGACATATATAAGTCTTTATAATGAGAACTTGTTCACTTAAGAACATATATGAGCACACAAGGTTTTTTATTT TGAACTACCAATAGAGCTCG
Downstream 100 bases:
>100_bases AAAGGGTCGCCTAGTTATTGTATTGGTAGGAATAAGCGCTTTCTTGATCCCTTCTTATGTGATTAGATGGCTACTTGCGA TTTTTGTTACGGCACTCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MKKSLIVFFAILVVMGILYGSTTGRVRSAFSSSILSALFLWMSLISLIFLALLLIAFVILVREKDLEARGHLRASLAFLK YWLIVAAALFLYASFYLSKLFKVKEMENITQTTDHVVVPPSFFETPSEATLASVFVYIPIIFFAIIFVLALLSMGRDVNE LRKTRQIKRELEAFDKKVDDLGVDAFSDPREAVIEFYRKAVLWLEILGIPYRESWTHWEHAKKVEYKKKAYVELARLFEK AKYAPEKVTMDDARRAYELYKVIKGES
Sequences:
>Translated_267_residues MKKSLIVFFAILVVMGILYGSTTGRVRSAFSSSILSALFLWMSLISLIFLALLLIAFVILVREKDLEARGHLRASLAFLK YWLIVAAALFLYASFYLSKLFKVKEMENITQTTDHVVVPPSFFETPSEATLASVFVYIPIIFFAIIFVLALLSMGRDVNE LRKTRQIKRELEAFDKKVDDLGVDAFSDPREAVIEFYRKAVLWLEILGIPYRESWTHWEHAKKVEYKKKAYVELARLFEK AKYAPEKVTMDDARRAYELYKVIKGES >Mature_267_residues MKKSLIVFFAILVVMGILYGSTTGRVRSAFSSSILSALFLWMSLISLIFLALLLIAFVILVREKDLEARGHLRASLAFLK YWLIVAAALFLYASFYLSKLFKVKEMENITQTTDHVVVPPSFFETPSEATLASVFVYIPIIFFAIIFVLALLSMGRDVNE LRKTRQIKRELEAFDKKVDDLGVDAFSDPREAVIEFYRKAVLWLEILGIPYRESWTHWEHAKKVEYKKKAYVELARLFEK AKYAPEKVTMDDARRAYELYKVIKGES
Specific function: Unknown
COG id: COG1989
COG function: function code NOU; Type II secretory pathway, prepilin signal peptidase PulO and related peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30792; Mature: 30792
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSLIVFFAILVVMGILYGSTTGRVRSAFSSSILSALFLWMSLISLIFLALLLIAFVIL CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VREKDLEARGHLRASLAFLKYWLIVAAALFLYASFYLSKLFKVKEMENITQTTDHVVVPP HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECC SFFETPSEATLASVFVYIPIIFFAIIFVLALLSMGRDVNELRKTRQIKRELEAFDKKVDD HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH LGVDAFSDPREAVIEFYRKAVLWLEILGIPYRESWTHWEHAKKVEYKKKAYVELARLFEK CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AKYAPEKVTMDDARRAYELYKVIKGES HHCCCCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKKSLIVFFAILVVMGILYGSTTGRVRSAFSSSILSALFLWMSLISLIFLALLLIAFVIL CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VREKDLEARGHLRASLAFLKYWLIVAAALFLYASFYLSKLFKVKEMENITQTTDHVVVPP HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECC SFFETPSEATLASVFVYIPIIFFAIIFVLALLSMGRDVNELRKTRQIKRELEAFDKKVDD HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH LGVDAFSDPREAVIEFYRKAVLWLEILGIPYRESWTHWEHAKKVEYKKKAYVELARLFEK CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AKYAPEKVTMDDARRAYELYKVIKGES HHCCCCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA