Click here to switch to the map view.

The map label for this gene is 18976763

Identifier: 18976763

GI number: 18976763

Start: 399753

End: 400157

Strand: Direct

Name: 18976763

Synonym: PF0391

Alternate gene names: NA

Gene position: 399753-400157 (Clockwise)

Preceding gene: 18976762

Following gene: 18976764

Centisome position: 20.95

GC content: 45.19

Gene sequence:

>405_bases
ATGAAGCTCAAAGGGAGGGGGATAGTAAAGGGAGTTGCAGAGGGTGAACTAGTAGTTTCAAGGAAGCCCCTTTCATTTTT
AGGAGGAGTGGATCCAAACACGGGAATAATCACTGATCCTGAAAGCGACATACAAGGGGAAAAGATAACAGGAAAGATAC
TTGCATTTCCCAGGGGAAAGGGATCAACTGTTGGGTCATATGTAATCTATGCTCTCGCGAAGAAAGGGACTGGACCTAAA
GCTATAATTGTCGAAGAGGCAGAGGCAATAGTGGCAGTGGGCGCTATAATCGCAGGAATTCCCCTAGTAACTGGAATTGA
TATTTCAAAATTAAAGAGTGGCATGAAGGTAAGAGTCGATGGTGAGAGAGGGGAGGTGGAGATTATTGCCCAGGGGGATT
TATGA

Upstream 100 bases:

>100_bases
GGGTAGCAACGGACAGCGGAAAGGCGGCATTTTACCTAAAATCTTTTGGGCTAAAAGTTCTTCTTGATACAACTGAGAAC
ATTATAATGGGGGCTCCATG

Downstream 100 bases:

>100_bases
GTGCGTTAACTGCAAGCATAGAGAAGTTTTAGACAAAACCCAGCCTCTCCTTCCTGGCAGATGTCCTGTTTGTGGAGGGG
ATATGATACTTGTTGGTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MKLKGRGIVKGVAEGELVVSRKPLSFLGGVDPNTGIITDPESDIQGEKITGKILAFPRGKGSTVGSYVIYALAKKGTGPK
AIIVEEAEAIVAVGAIIAGIPLVTGIDISKLKSGMKVRVDGERGEVEIIAQGDL

Sequences:

>Translated_134_residues
MKLKGRGIVKGVAEGELVVSRKPLSFLGGVDPNTGIITDPESDIQGEKITGKILAFPRGKGSTVGSYVIYALAKKGTGPK
AIIVEEAEAIVAVGAIIAGIPLVTGIDISKLKSGMKVRVDGERGEVEIIAQGDL
>Mature_134_residues
MKLKGRGIVKGVAEGELVVSRKPLSFLGGVDPNTGIITDPESDIQGEKITGKILAFPRGKGSTVGSYVIYALAKKGTGPK
AIIVEEAEAIVAVGAIIAGIPLVTGIDISKLKSGMKVRVDGERGEVEIIAQGDL

Specific function: Unknown

COG id: COG1786

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0107 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y391_PYRFU (Q8U3R5)

Other databases:

- EMBL:   AE009950
- RefSeq:   NP_578120.1
- ProteinModelPortal:   Q8U3R5
- SMR:   Q8U3R5
- EnsemblBacteria:   EBPYRT00000005939
- GeneID:   1468227
- GenomeReviews:   AE009950_GR
- KEGG:   pfu:PF0391
- NMPDR:   fig|186497.1.peg.398
- GeneTree:   EBGT00050000022299
- HOGENOM:   HBG646578
- OMA:   PHGKGST
- ProtClustDB:   PRK03955
- GO:   GO:0016310
- HAMAP:   MF_00078
- InterPro:   IPR015928
- InterPro:   IPR002840
- InterPro:   IPR008279
- InterPro:   IPR012016
- InterPro:   IPR020794
- Gene3D:   G3DSA:3.50.30.10
- PIRSF:   PIRSF004966

Pfam domain/function: PF01989 DUF126; SSF52016 Aconitase/3IPM_dehydase_swvl

EC number: NA

Molecular weight: Translated: 13809; Mature: 13809

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKGRGIVKGVAEGELVVSRKPLSFLGGVDPNTGIITDPESDIQGEKITGKILAFPRGK
CCCCCCCEEEECCCCEEEEEECCHHHHCCCCCCCCEEECCCCCCCCCEEEEEEEEEECCC
GSTVGSYVIYALAKKGTGPKAIIVEEAEAIVAVGAIIAGIPLVTGIDISKLKSGMKVRVD
CCCHHHEEEEEEECCCCCCEEEEEECCHHHHHHHHHHHCCCEECCCCHHHHCCCCEEEEE
GERGEVEIIAQGDL
CCCCCEEEEEECCC
>Mature Secondary Structure
MKLKGRGIVKGVAEGELVVSRKPLSFLGGVDPNTGIITDPESDIQGEKITGKILAFPRGK
CCCCCCCEEEECCCCEEEEEECCHHHHCCCCCCCCEEECCCCCCCCCEEEEEEEEEECCC
GSTVGSYVIYALAKKGTGPKAIIVEEAEAIVAVGAIIAGIPLVTGIDISKLKSGMKVRVD
CCCHHHEEEEEEECCCCCCEEEEEECCHHHHHHHHHHHCCCEECCCCHHHHCCCCEEEEE
GERGEVEIIAQGDL
CCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA