| Definition | Pyrococcus furiosus DSM 3638, complete genome. |
|---|---|
| Accession | NC_003413 |
| Length | 1,908,256 |
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The map label for this gene is 18976762
Identifier: 18976762
GI number: 18976762
Start: 398596
End: 399753
Strand: Direct
Name: 18976762
Synonym: PF0390
Alternate gene names: NA
Gene position: 398596-399753 (Clockwise)
Preceding gene: 18976761
Following gene: 18976763
Centisome position: 20.89
GC content: 41.88
Gene sequence:
>1158_bases ATGTACCTAACAAAAGAGGAAGAACTAGCTCTTTCTGGAGAATATGGGCCTGCAATACAAAAAGCCATGGAGATACTTGT TGCCCTGGGTGATATCTACAATGCAGACAGGTTAATACCAATAAAAAGCGCTCAAATAGCAGGAGTTAGCTATAAAAATA TTGGCGATGAAGGAATAGAATTCCTTAGAGACTTTGTGGAAGCTGGAGCTAAAGTTTCGGTGTATACTACCTTAAATCCA GCGGGAATTGGCGATGAAGACTTTATGGAAAAGCAAGCGGAAATAATTGAACTTTACAGGAAGATGGGAGTTGAAATTAC ATCCACATGCACTCCCTACTATGGGCCTAACCTTCCAAAGTATGGAGATCATCTAGCTTGGAGCGAAAGCTCTGCTGTAA TCTTTGCAAATTCTGTTTTAGGGGCTAGGACAAATAGGGAAGGAGGCCCCTCAAGCTTAGCTGCAGCAATTGTGGGAAAA ACTCCCAACTATGGACTTCATTTAGAGGAGAACAGAAAAGCTACTCATATAATTGAAGTAAAAGATAAGCTAAAATCTCG CACAGAATATTCTCTTCTCGGCTATAAAATTGGAGAGATTGTCGAGAATGGAGTTCCATACATAAGAGGAATAGCACCTA CAACCGAAGACTTGAAAGCTTTAGGGGCAAGCATGGCAGCTAGCGGTGGAGTTGGATTGTATCATGTAGAGGGATCCACC CCTGAGTGGAGAGGGGCAATAGTTGACAAGATAGAAAAGATCGAAATTGGAAGAAAGGATTTAGAGGATGTCAGGCAGAG ATTCTCCGTTGATTGGGGAGATGTTGATATAATCCTCTTAGGGTGTCCTCACGCTTCATTAAGGGAAATAAAGGAAATAG CTGAATTGTTGAGAATGAGAGATAAGCCTTTGAAGATACCTCTATTTATCACAGTTAGCCGGGGCATCAAAGCCTTGGCG GATTACTTGGGATATACCGAGATCATTGAAAGGTACAACGGAAAGCTTTTACCTGACGTTTGTCTTGTTGTTTCGCCAAT AAAGGAGTGGTATTCTGGGGTAGCAACGGACAGCGGAAAGGCGGCATTTTACCTAAAATCTTTTGGGCTAAAAGTTCTTC TTGATACAACTGAGAACATTATAATGGGGGCTCCATGA
Upstream 100 bases:
>100_bases TTGGATCCCGCGACCCGGGTTCGAATCCCGGCGGGGCTACCATCGTTTTCTTTTAAAAATCTTTTAAACGTCAAAACCTA AACTTCTATTAGGTGGGAAA
Downstream 100 bases:
>100_bases TGAAGCTCAAAGGGAGGGGGATAGTAAAGGGAGTTGCAGAGGGTGAACTAGTAGTTTCAAGGAAGCCCCTTTCATTTTTA GGAGGAGTGGATCCAAACAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 385; Mature: 385
Protein sequence:
>385_residues MYLTKEEELALSGEYGPAIQKAMEILVALGDIYNADRLIPIKSAQIAGVSYKNIGDEGIEFLRDFVEAGAKVSVYTTLNP AGIGDEDFMEKQAEIIELYRKMGVEITSTCTPYYGPNLPKYGDHLAWSESSAVIFANSVLGARTNREGGPSSLAAAIVGK TPNYGLHLEENRKATHIIEVKDKLKSRTEYSLLGYKIGEIVENGVPYIRGIAPTTEDLKALGASMAASGGVGLYHVEGST PEWRGAIVDKIEKIEIGRKDLEDVRQRFSVDWGDVDIILLGCPHASLREIKEIAELLRMRDKPLKIPLFITVSRGIKALA DYLGYTEIIERYNGKLLPDVCLVVSPIKEWYSGVATDSGKAAFYLKSFGLKVLLDTTENIIMGAP
Sequences:
>Translated_385_residues MYLTKEEELALSGEYGPAIQKAMEILVALGDIYNADRLIPIKSAQIAGVSYKNIGDEGIEFLRDFVEAGAKVSVYTTLNP AGIGDEDFMEKQAEIIELYRKMGVEITSTCTPYYGPNLPKYGDHLAWSESSAVIFANSVLGARTNREGGPSSLAAAIVGK TPNYGLHLEENRKATHIIEVKDKLKSRTEYSLLGYKIGEIVENGVPYIRGIAPTTEDLKALGASMAASGGVGLYHVEGST PEWRGAIVDKIEKIEIGRKDLEDVRQRFSVDWGDVDIILLGCPHASLREIKEIAELLRMRDKPLKIPLFITVSRGIKALA DYLGYTEIIERYNGKLLPDVCLVVSPIKEWYSGVATDSGKAAFYLKSFGLKVLLDTTENIIMGAP >Mature_385_residues MYLTKEEELALSGEYGPAIQKAMEILVALGDIYNADRLIPIKSAQIAGVSYKNIGDEGIEFLRDFVEAGAKVSVYTTLNP AGIGDEDFMEKQAEIIELYRKMGVEITSTCTPYYGPNLPKYGDHLAWSESSAVIFANSVLGARTNREGGPSSLAAAIVGK TPNYGLHLEENRKATHIIEVKDKLKSRTEYSLLGYKIGEIVENGVPYIRGIAPTTEDLKALGASMAASGGVGLYHVEGST PEWRGAIVDKIEKIEIGRKDLEDVRQRFSVDWGDVDIILLGCPHASLREIKEIAELLRMRDKPLKIPLFITVSRGIKALA DYLGYTEIIERYNGKLLPDVCLVVSPIKEWYSGVATDSGKAAFYLKSFGLKVLLDTTENIIMGAP
Specific function: Unknown
COG id: COG1679
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.thermoautotrophicum MTH1421 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007506 [H]
Pfam domain/function: PF04412 DUF521 [H]
EC number: NA
Molecular weight: Translated: 42213; Mature: 42213
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLTKEEELALSGEYGPAIQKAMEILVALGDIYNADRLIPIKSAQIAGVSYKNIGDEGIE CCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCEECCCCHHCCCHHHHH FLRDFVEAGAKVSVYTTLNPAGIGDEDFMEKQAEIIELYRKMGVEITSTCTPYYGPNLPK HHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCC YGDHLAWSESSAVIFANSVLGARTNREGGPSSLAAAIVGKTPNYGLHLEENRKATHIIEV CCCCCCCCCCCEEEEECCHHCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCEEEEEE KDKLKSRTEYSLLGYKIGEIVENGVPYIRGIAPTTEDLKALGASMAASGGVGLYHVEGST HHHHHCCCCHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCC PEWRGAIVDKIEKIEIGRKDLEDVRQRFSVDWGDVDIILLGCPHASLREIKEIAELLRMR CCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHC DKPLKIPLFITVSRGIKALADYLGYTEIIERYNGKLLPDVCLVVSPIKEWYSGVATDSGK CCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCC AAFYLKSFGLKVLLDTTENIIMGAP EEEEEECCCEEEEEECCCCEEECCC >Mature Secondary Structure MYLTKEEELALSGEYGPAIQKAMEILVALGDIYNADRLIPIKSAQIAGVSYKNIGDEGIE CCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCEECCCCHHCCCHHHHH FLRDFVEAGAKVSVYTTLNPAGIGDEDFMEKQAEIIELYRKMGVEITSTCTPYYGPNLPK HHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCC YGDHLAWSESSAVIFANSVLGARTNREGGPSSLAAAIVGKTPNYGLHLEENRKATHIIEV CCCCCCCCCCCEEEEECCHHCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCEEEEEE KDKLKSRTEYSLLGYKIGEIVENGVPYIRGIAPTTEDLKALGASMAASGGVGLYHVEGST HHHHHCCCCHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCC PEWRGAIVDKIEKIEIGRKDLEDVRQRFSVDWGDVDIILLGCPHASLREIKEIAELLRMR CCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHC DKPLKIPLFITVSRGIKALADYLGYTEIIERYNGKLLPDVCLVVSPIKEWYSGVATDSGK CCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCC AAFYLKSFGLKVLLDTTENIIMGAP EEEEEECCCEEEEEECCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]