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The map label for this gene is 18976658

Identifier: 18976658

GI number: 18976658

Start: 296416

End: 297234

Strand: Direct

Name: 18976658

Synonym: PF0286

Alternate gene names: NA

Gene position: 296416-297234 (Clockwise)

Preceding gene: 18976657

Following gene: 18976659

Centisome position: 15.53

GC content: 40.78

Gene sequence:

>819_bases
ATGAGAAGGATCTCGGAGTTGAGTCTAGATGAGGTTGAGAACATAAAGAAGAGAATCTCGGAGCTTAGAGACGAAGGACT
TAGCTACTCAAAGATAGCAGGGATAATTGGGCAGGAGTTTCATGTTAGTATTTCCAAGGCAACGGTGATTAGATGGTGCA
AAGGGACGAGCGATCCTGCAAATAGGATAAAAAGGGTAAACCTTGAGCCATCTCCTCAACTGGCGTATATAATAGGGGTC
TACTTTGGGGACGGTAGCATAGATGCAGATGAGAAGTACAGGTATAGGGTCAGGCTCAAGGTCGTTGATAAGGAGTTCGC
TGAAGCTTTTGCAAATGCACTTAAGGATATAGGGGCAAATCCTAGAATTTATTTTGAAGGCTCTACAGGTAGATGGTGCG
TTGAGGCCACAAGCAAAGAGCTCTACATGTTCTTGAGTAAGCCAAAAGAAGAACTCCTGAGGATTGCTAAAATGTTTCCC
AGGGAGTTTATAAGGGGGTTCTTTGATAGTGAAGGCTATGTTTTTGTAGATCCAAAAGATCCTAGAATGGCATACATTAG
TGTCTGGAATTATGATAGAGAGCTATTGGAGATATGTAGACGTCTCCTACTGAACAATTTTAACATACACTCGACAATTT
TCCTTAAACGCGAGAAGAACTCCGAGGTTATTATCAGAGGAAAAGTATACAAATATAACGGAGATCTCTATGAGCTTAGG
ATATATAGACGAGAGAGCGTTAAGGCATTTGGTGAGGAAATTGGACTAACTATTGATAGAAAGTGGCGAGCTCTTAAATC
ATTTTTACTTTCATATTGA

Upstream 100 bases:

>100_bases
ACTTTTAGTGAAAGTACAATCATTTTAAAAATTTAAATACGCTTAAATTTTGCTTTCATTTACCAAAAGCTATTTAAATA
ATTAAAACTATCGTGAGTTT

Downstream 100 bases:

>100_bases
GTAAAAATATTACAACCAAAAGTAGAATGGTAGCGGGCCGAGGATTTGAACCTCGGACCTCCGGGTTATGAGCCCGGCGG
GCACTCCTAGCTGCCCCACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MRRISELSLDEVENIKKRISELRDEGLSYSKIAGIIGQEFHVSISKATVIRWCKGTSDPANRIKRVNLEPSPQLAYIIGV
YFGDGSIDADEKYRYRVRLKVVDKEFAEAFANALKDIGANPRIYFEGSTGRWCVEATSKELYMFLSKPKEELLRIAKMFP
REFIRGFFDSEGYVFVDPKDPRMAYISVWNYDRELLEICRRLLLNNFNIHSTIFLKREKNSEVIIRGKVYKYNGDLYELR
IYRRESVKAFGEEIGLTIDRKWRALKSFLLSY

Sequences:

>Translated_272_residues
MRRISELSLDEVENIKKRISELRDEGLSYSKIAGIIGQEFHVSISKATVIRWCKGTSDPANRIKRVNLEPSPQLAYIIGV
YFGDGSIDADEKYRYRVRLKVVDKEFAEAFANALKDIGANPRIYFEGSTGRWCVEATSKELYMFLSKPKEELLRIAKMFP
REFIRGFFDSEGYVFVDPKDPRMAYISVWNYDRELLEICRRLLLNNFNIHSTIFLKREKNSEVIIRGKVYKYNGDLYELR
IYRRESVKAFGEEIGLTIDRKWRALKSFLLSY
>Mature_272_residues
MRRISELSLDEVENIKKRISELRDEGLSYSKIAGIIGQEFHVSISKATVIRWCKGTSDPANRIKRVNLEPSPQLAYIIGV
YFGDGSIDADEKYRYRVRLKVVDKEFAEAFANALKDIGANPRIYFEGSTGRWCVEATSKELYMFLSKPKEELLRIAKMFP
REFIRGFFDSEGYVFVDPKDPRMAYISVWNYDRELLEICRRLLLNNFNIHSTIFLKREKNSEVIIRGKVYKYNGDLYELR
IYRRESVKAFGEEIGLTIDRKWRALKSFLLSY

Specific function: Unknown

COG id: COG3780

COG function: function code L; DNA endonuclease related to intein-encoded endonucleases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DOD-type homing endonuclease domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004042 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31894; Mature: 31894

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: PS50819 INTEIN_ENDONUCLEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRISELSLDEVENIKKRISELRDEGLSYSKIAGIIGQEFHVSISKATVIRWCKGTSDPA
CCCCHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEHHHHEEHCCCCCCCHH
NRIKRVNLEPSPQLAYIIGVYFGDGSIDADEKYRYRVRLKVVDKEFAEAFANALKDIGAN
HHHEECCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHCCCC
PRIYFEGSTGRWCVEATSKELYMFLSKPKEELLRIAKMFPREFIRGFFDSEGYVFVDPKD
CEEEEECCCCCEEEEECCCHHHEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCC
PRMAYISVWNYDRELLEICRRLLLNNFNIHSTIFLKREKNSEVIIRGKVYKYNGDLYELR
CCEEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEEEEEEEEECCCEEEEE
IYRRESVKAFGEEIGLTIDRKWRALKSFLLSY
EEHHHHHHHHHHHHCCEECHHHHHHHHHHHCC
>Mature Secondary Structure
MRRISELSLDEVENIKKRISELRDEGLSYSKIAGIIGQEFHVSISKATVIRWCKGTSDPA
CCCCHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEHHHHEEHCCCCCCCHH
NRIKRVNLEPSPQLAYIIGVYFGDGSIDADEKYRYRVRLKVVDKEFAEAFANALKDIGAN
HHHEECCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHCCCC
PRIYFEGSTGRWCVEATSKELYMFLSKPKEELLRIAKMFPREFIRGFFDSEGYVFVDPKD
CEEEEECCCCCEEEEECCCHHHEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCC
PRMAYISVWNYDRELLEICRRLLLNNFNIHSTIFLKREKNSEVIIRGKVYKYNGDLYELR
CCEEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEEEEEEEEECCCEEEEE
IYRRESVKAFGEEIGLTIDRKWRALKSFLLSY
EEHHHHHHHHHHHHCCEECHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]