Click here to switch to the map view.

The map label for this gene is yfiQ [C]

Identifier: 18976605

GI number: 18976605

Start: 244161

End: 245558

Strand: Direct

Name: yfiQ [C]

Synonym: PF0233

Alternate gene names: 18976605

Gene position: 244161-245558 (Clockwise)

Preceding gene: 18976604

Following gene: 18976612

Centisome position: 12.79

GC content: 43.28

Gene sequence:

>1398_bases
ATGACAGTTAACCTAGACTTTCTATTTTATCCAAAGAGCGTTGCAGTAATAGGAGCTTCTGCAACACCTGGGAAAGTGGG
AAATGCAATAATGAAGTCTCTCGCAGCAAATTTCAATGGAAAAGTCTACCCAGTGAACGTGAAGGAAGGAGAAATTGAGA
TAAATGGAAAGAAGTTCAAGGTTTACAGAAGTATAAAGGAAATTCCAGATGAAGTCGATGTAGCTGTAATAGCTGTTCCA
GCAAAGTTCGTTCCTGATGTAATTGATGAGTGTGGAGAAAAAGGAGTCAAAGGTGCCATTGTTATTTCAGCTGGATTTAA
GGAGGCAGGAAGGGCAGATCTTGAGGAAGAGCTGGTAAAGAGGGCTAGAAAGTGGGGAATACGTGTAGTTGGTCCCAATT
GTCTTGGGGTTACTAACTTGGAGAATGGGTTTGATTGTAATTTTAATCCTCCAGAAAGACAGGCAAGGCCAAAATTTGGC
CCAATAGCGTTTATGAGCCAAAGTGGTGCTTTTGGGGCAGCCATACTTGACTGGGCTGCAAGGCATGAAGTCGGAATGAG
CAAGTTCATTAGCCTGGGAAACATGGCAGATTTAGACGAGAGTGACTTTATGCTATATCTAAAGGATGATCCAAAAACCA
AGGTAATAACAGCCTATATAGAGGGAGTAAAGGATGGAAGAAAGTTTTTCAATGCGGCTAAAGAGACTACAAAAGTCAAG
CCCGTAATTATTCTTAAGGCTGGAAGGACTGAGGCTGGAGCCAAGGCTGCTGCTTCTCACACAGGCTCACTCGCTGGAAG
TTACAAAATATATCAAGCAGCATTCGAGCAAACTGGTGTTCTTGCAGCTAAAAGCATGAGACAGCTCTTTAACTATGCGA
AAGCCTTAGCGATGCAAAGTCCAGCCAAGGGAGATAGAGTTGCAATAGTGACTAATGGTGGTGGGGCTGGAGTAATGATG
AGCGATGGTCTTCTAGAGGCAGGTCTAAAGTTGGCAGAATTCACGGAGGAAACTAAAGAAAAGTTCAGAAAGGCCATTGA
AGAGGGACTATTGCCTGAGCACATGAGCTATAAGAATCCAGTTGATGTAATTGGGGATGCACCCTCAAGTAGATATGAGA
CTGCGATTAGATATGTTCTAGAGGATCCAAATGTTGACATAGTTGTTGTGATAGCGCTCTTCCAGAGTCCAGCTTTGGAC
GAAGGAATAGTGGACGTTATGGAGAGAGTTAAGGAGTACGGAAAGCCAATAGTCTTTGTGGCCCCAGGTGGTGAGTATCC
AGAAAGAATGGCGAGAAAAATAGAGGAAAAGGGGATTCCAGTCTTTGAAACAGTTGAGGATGGGGTAGATGCAGTTTATG
CCCTGATTAAGTATGGAAAGTATTTAGCTGAGCTCTAA

Upstream 100 bases:

>100_bases
TAGAGAAGGCGAAGCTTCTTAGAGAGCTGTTGGATATTTAATCCAACTTGGAAACCTTTATATATGTAAAGATTCTGGGA
AATTTTAGGGTGATGAAACA

Downstream 100 bases:

>100_bases
TTTCTTGAATTCTTTTTCTATTATCTTGATTTCCTCTTCCTTTAGTGCTCGTGGATCAAGAGTTAAAATAATAAACTTAT
TCTCTGCTAGGACGATGTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 465; Mature: 464

Protein sequence:

>465_residues
MTVNLDFLFYPKSVAVIGASATPGKVGNAIMKSLAANFNGKVYPVNVKEGEIEINGKKFKVYRSIKEIPDEVDVAVIAVP
AKFVPDVIDECGEKGVKGAIVISAGFKEAGRADLEEELVKRARKWGIRVVGPNCLGVTNLENGFDCNFNPPERQARPKFG
PIAFMSQSGAFGAAILDWAARHEVGMSKFISLGNMADLDESDFMLYLKDDPKTKVITAYIEGVKDGRKFFNAAKETTKVK
PVIILKAGRTEAGAKAAASHTGSLAGSYKIYQAAFEQTGVLAAKSMRQLFNYAKALAMQSPAKGDRVAIVTNGGGAGVMM
SDGLLEAGLKLAEFTEETKEKFRKAIEEGLLPEHMSYKNPVDVIGDAPSSRYETAIRYVLEDPNVDIVVVIALFQSPALD
EGIVDVMERVKEYGKPIVFVAPGGEYPERMARKIEEKGIPVFETVEDGVDAVYALIKYGKYLAEL

Sequences:

>Translated_465_residues
MTVNLDFLFYPKSVAVIGASATPGKVGNAIMKSLAANFNGKVYPVNVKEGEIEINGKKFKVYRSIKEIPDEVDVAVIAVP
AKFVPDVIDECGEKGVKGAIVISAGFKEAGRADLEEELVKRARKWGIRVVGPNCLGVTNLENGFDCNFNPPERQARPKFG
PIAFMSQSGAFGAAILDWAARHEVGMSKFISLGNMADLDESDFMLYLKDDPKTKVITAYIEGVKDGRKFFNAAKETTKVK
PVIILKAGRTEAGAKAAASHTGSLAGSYKIYQAAFEQTGVLAAKSMRQLFNYAKALAMQSPAKGDRVAIVTNGGGAGVMM
SDGLLEAGLKLAEFTEETKEKFRKAIEEGLLPEHMSYKNPVDVIGDAPSSRYETAIRYVLEDPNVDIVVVIALFQSPALD
EGIVDVMERVKEYGKPIVFVAPGGEYPERMARKIEEKGIPVFETVEDGVDAVYALIKYGKYLAEL
>Mature_464_residues
TVNLDFLFYPKSVAVIGASATPGKVGNAIMKSLAANFNGKVYPVNVKEGEIEINGKKFKVYRSIKEIPDEVDVAVIAVPA
KFVPDVIDECGEKGVKGAIVISAGFKEAGRADLEEELVKRARKWGIRVVGPNCLGVTNLENGFDCNFNPPERQARPKFGP
IAFMSQSGAFGAAILDWAARHEVGMSKFISLGNMADLDESDFMLYLKDDPKTKVITAYIEGVKDGRKFFNAAKETTKVKP
VIILKAGRTEAGAKAAASHTGSLAGSYKIYQAAFEQTGVLAAKSMRQLFNYAKALAMQSPAKGDRVAIVTNGGGAGVMMS
DGLLEAGLKLAEFTEETKEKFRKAIEEGLLPEHMSYKNPVDVIGDAPSSRYETAIRYVLEDPNVDIVVVIALFQSPALDE
GIVDVMERVKEYGKPIVFVAPGGEYPERMARKIEEKGIPVFETVEDGVDAVYALIKYGKYLAEL

Specific function: Unknown

COG id: COG1042

COG function: function code C; Acyl-CoA synthetase (NDP forming)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yfiQ [H]

Homologues:

Organism=Escherichia coli, GI1788938, Length=468, Percent_Identity=32.0512820512821, Blast_Score=231, Evalue=1e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014089
- InterPro:   IPR013650
- InterPro:   IPR003781
- InterPro:   IPR016040
- InterPro:   IPR005809
- InterPro:   IPR016102 [H]

Pfam domain/function: PF08442 ATP-grasp_2; PF02629 CoA_binding [H]

EC number: NA

Molecular weight: Translated: 50416; Mature: 50284

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVNLDFLFYPKSVAVIGASATPGKVGNAIMKSLAANFNGKVYPVNVKEGEIEINGKKFK
CEEEEEEEEECCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCEEH
VYRSIKEIPDEVDVAVIAVPAKFVPDVIDECGEKGVKGAIVISAGFKEAGRADLEEELVK
HHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHH
RARKWGIRVVGPNCLGVTNLENGFDCNFNPPERQARPKFGPIAFMSQSGAFGAAILDWAA
HHHHCCCEEECCCCEEECCCCCCCCCCCCCCHHHCCCCCCCEEEEECCCCCHHHHHHHHH
RHEVGMSKFISLGNMADLDESDFMLYLKDDPKTKVITAYIEGVKDGRKFFNAAKETTKVK
HHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCC
PVIILKAGRTEAGAKAAASHTGSLAGSYKIYQAAFEQTGVLAAKSMRQLFNYAKALAMQS
EEEEEECCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PAKGDRVAIVTNGGGAGVMMSDGLLEAGLKLAEFTEETKEKFRKAIEEGLLPEHMSYKNP
CCCCCEEEEEECCCCCEEEEECCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
VDVIGDAPSSRYETAIRYVLEDPNVDIVVVIALFQSPALDEGIVDVMERVKEYGKPIVFV
CHHCCCCCCHHHHHHHHHEECCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEE
APGGEYPERMARKIEEKGIPVFETVEDGVDAVYALIKYGKYLAEL
ECCCCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TVNLDFLFYPKSVAVIGASATPGKVGNAIMKSLAANFNGKVYPVNVKEGEIEINGKKFK
EEEEEEEEECCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCEEH
VYRSIKEIPDEVDVAVIAVPAKFVPDVIDECGEKGVKGAIVISAGFKEAGRADLEEELVK
HHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHH
RARKWGIRVVGPNCLGVTNLENGFDCNFNPPERQARPKFGPIAFMSQSGAFGAAILDWAA
HHHHCCCEEECCCCEEECCCCCCCCCCCCCCHHHCCCCCCCEEEEECCCCCHHHHHHHHH
RHEVGMSKFISLGNMADLDESDFMLYLKDDPKTKVITAYIEGVKDGRKFFNAAKETTKVK
HHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCC
PVIILKAGRTEAGAKAAASHTGSLAGSYKIYQAAFEQTGVLAAKSMRQLFNYAKALAMQS
EEEEEECCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PAKGDRVAIVTNGGGAGVMMSDGLLEAGLKLAEFTEETKEKFRKAIEEGLLPEHMSYKNP
CCCCCEEEEEECCCCCEEEEECCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
VDVIGDAPSSRYETAIRYVLEDPNVDIVVVIALFQSPALDEGIVDVMERVKEYGKPIVFV
CHHCCCCCCHHHHHHHHHEECCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEE
APGGEYPERMARKIEEKGIPVFETVEDGVDAVYALIKYGKYLAEL
ECCCCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]