| Definition | Pyrococcus furiosus DSM 3638, complete genome. |
|---|---|
| Accession | NC_003413 |
| Length | 1,908,256 |
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The map label for this gene is 18976479
Identifier: 18976479
GI number: 18976479
Start: 112570
End: 113157
Strand: Direct
Name: 18976479
Synonym: PF0107
Alternate gene names: NA
Gene position: 112570-113157 (Clockwise)
Preceding gene: 18976478
Following gene: 18976480
Centisome position: 5.9
GC content: 42.01
Gene sequence:
>588_bases ATGCCAGACGTTTATGAACCTATAATGGGAGCTTTTTCACTTGCAAGACGATTGTGGAAAATGATAGTTGAGAAAAAGGG CCTGCCAACTGGAGATGATGTGGCCTCTCTCCTAGAAAACTTGGGTTTTGAAAGAGTGTGTACGGGAAGTGGTCTTGCTG TATTTAGAAATAGGTTTGTGATTGCCCTTCTAATTCCCAGGGAGAACATGATTGTCGTTGACTTTCTCTCGTCTAGTGGA GAGCTGAGCGATGCCCTTGAACTCATAGCTTATTATGACAAGGAGATCGAATGTTATGTCGTCGAAATCCTTCCCTCAAA TGAGTTAGAGTATGAGGAAAACTTAGGAATAGAGCCAGTTATAATTGATGGAAAGACCTTTGAGCTTAGAAGCTACCCAG TTCTTGGTGATTTTAAGCAGGGAAAAGACAAAGTTGTTCTCAAAATTGATAGAGAAGTTTATGAACTGTGGAAAGAGAGT GGAAAGCTAGACGTTTGTCCAGTGTGTGGGGGTCATCTTAGGTGGAAGCAAGGAAAAGCTTTGTGTACCGAGTGTGGAAT AGAGGTGGTCGTTGATGAGGAACATTAA
Upstream 100 bases:
>100_bases GGAAGGTTAGGAGGGTAACTTACATGGGAGTTCTTATGTTTCCCATCCTTGTGGAAAGTGTTATTTAGCCTCTTGTCATT CCTATTAATGGTGAGAAGAA
Downstream 100 bases:
>100_bases GGCGAAGCTTATACATTATTCAAAGCTTGCACATAGAAAAGGCTTAACTGGTTCATTTGGAGGAAACATGAGCATTAGAG TTGGGAACTACGTGTTCATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MPDVYEPIMGAFSLARRLWKMIVEKKGLPTGDDVASLLENLGFERVCTGSGLAVFRNRFVIALLIPRENMIVVDFLSSSG ELSDALELIAYYDKEIECYVVEILPSNELEYEENLGIEPVIIDGKTFELRSYPVLGDFKQGKDKVVLKIDREVYELWKES GKLDVCPVCGGHLRWKQGKALCTECGIEVVVDEEH
Sequences:
>Translated_195_residues MPDVYEPIMGAFSLARRLWKMIVEKKGLPTGDDVASLLENLGFERVCTGSGLAVFRNRFVIALLIPRENMIVVDFLSSSG ELSDALELIAYYDKEIECYVVEILPSNELEYEENLGIEPVIIDGKTFELRSYPVLGDFKQGKDKVVLKIDREVYELWKES GKLDVCPVCGGHLRWKQGKALCTECGIEVVVDEEH >Mature_194_residues PDVYEPIMGAFSLARRLWKMIVEKKGLPTGDDVASLLENLGFERVCTGSGLAVFRNRFVIALLIPRENMIVVDFLSSSGE LSDALELIAYYDKEIECYVVEILPSNELEYEENLGIEPVIIDGKTFELRSYPVLGDFKQGKDKVVLKIDREVYELWKESG KLDVCPVCGGHLRWKQGKALCTECGIEVVVDEEH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22007; Mature: 21875
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDVYEPIMGAFSLARRLWKMIVEKKGLPTGDDVASLLENLGFERVCTGSGLAVFRNRFV CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEECCCCHHHHHCCEE IALLIPRENMIVVDFLSSSGELSDALELIAYYDKEIECYVVEILPSNELEYEENLGIEPV EEEEECCCCEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHCCCCCEE IIDGKTFELRSYPVLGDFKQGKDKVVLKIDREVYELWKESGKLDVCPVCGGHLRWKQGKA EECCCEEEEECCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCEEEEECCCCCEEECCCCH LCTECGIEVVVDEEH HHHHCCEEEEEECCC >Mature Secondary Structure PDVYEPIMGAFSLARRLWKMIVEKKGLPTGDDVASLLENLGFERVCTGSGLAVFRNRFV CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEECCCCHHHHHCCEE IALLIPRENMIVVDFLSSSGELSDALELIAYYDKEIECYVVEILPSNELEYEENLGIEPV EEEEECCCCEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHCCCCCEE IIDGKTFELRSYPVLGDFKQGKDKVVLKIDREVYELWKESGKLDVCPVCGGHLRWKQGKA EECCCEEEEECCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCEEEEECCCCCEEECCCCH LCTECGIEVVVDEEH HHHHCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA