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The map label for this gene is 18976478

Identifier: 18976478

GI number: 18976478

Start: 111416

End: 112537

Strand: Direct

Name: 18976478

Synonym: PF0106

Alternate gene names: NA

Gene position: 111416-112537 (Clockwise)

Preceding gene: 18976477

Following gene: 18976479

Centisome position: 5.84

GC content: 39.75

Gene sequence:

>1122_bases
ATGCGTGAATTACTGCAGTTAATCGCTGGAGTTGGTTTTGGAACTTTAACTGGCCTAACGCCAGGGCTTCACGTAAATTC
TCTTAGTAGACTTAGCTTACCTATCCCTACTCTCTTTGTAATGGGTTTAGTTCATACTTTTCTGGACTCTATTCCTTCAG
CTCTCTTTGGAGTTCCTGATGCCGATGATAGCGTTCCTTCTCTTTTACCTTCTCATAGATTAGTTCTTGAAGGAAAATTT
GGAGAAGTTGTAAAGCTTTCTCTTTTTGCTAGCACATTGGCCCTTATTTTCTCAATTGCAACTCTTCCCGCGTATTTTTT
AGTCGCCCCCAAGTACAGTTTTAAGATTGGGATTATTTTTGTAGTTTTCTTGTCTCTTTTTCTAATTCTTTCCCAGGGGA
ACAAACTAGGAGCCCTAGTTATATTTTTGCTGGCTGGATTTTTAGGATATGAGGTATTTTCTCTTCCGATTTCAGATCCC
TTTTATCCTCTTTTTACTGGGTTATTTGCCCTTCCTTTGCTGGTTGACTCTTACTTGCATCCTCCAAAAAGTGTTAAGGT
TTACGATGCCCCTCTTCGCATTCCTTCCTGGAGGTTAGTAAAGTTCTCTATTTTTGGCACTTTTTTCGGAGCTTTGGCAT
CTCTTTTACCCACTCTAACTGCCGGTCAAGCTTCACTCCTAGGCTCGAAGTTTACAAAAGATGATAGGGAGTTTTTGACA
ATAGTTTATTCAACTAACACGGCGGCATACTCTTTTTCTCTTGCAAACTTAGCACTTACTGGAAAGACGAGAAATGGAGT
AATGGTAGCCATTGGAAATGTCTCGATTCAAGAATTGCCATTTCTCTACCTTTTAGGTCTTTCGGCATCTATGCTACTCT
TAATTTTTGCTCCCAGGTTGGCGATAATTATTGGAAAAGTCGCCTTTAGGCAGTATAGGCCTACTATCCTGGGAATAATT
GTTTTTCTGTTTCTTCTGGGATTTTTATACGATGGTATTTTGGGAGTTTTAGTAATGATTTCAGCTATGTTTCTTGGGTT
TGTGGCTCCTCTTTGGAAGGTTAGGAGGGTAACTTACATGGGAGTTCTTATGTTTCCCATCCTTGTGGAAAGTGTTATTT
AG

Upstream 100 bases:

>100_bases
AGGGTGTTAAAGTTAGAGAAGGGGACTATATTACAGCCTATGGAGTCTTCTCTACCTATTATGACAAGCCCATGTTAATA
GTGTATGGAGAGGAGGATGT

Downstream 100 bases:

>100_bases
CCTCTTGTCATTCCTATTAATGGTGAGAAGAAATGCCAGACGTTTATGAACCTATAATGGGAGCTTTTTCACTTGCAAGA
CGATTGTGGAAAATGATAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MRELLQLIAGVGFGTLTGLTPGLHVNSLSRLSLPIPTLFVMGLVHTFLDSIPSALFGVPDADDSVPSLLPSHRLVLEGKF
GEVVKLSLFASTLALIFSIATLPAYFLVAPKYSFKIGIIFVVFLSLFLILSQGNKLGALVIFLLAGFLGYEVFSLPISDP
FYPLFTGLFALPLLVDSYLHPPKSVKVYDAPLRIPSWRLVKFSIFGTFFGALASLLPTLTAGQASLLGSKFTKDDREFLT
IVYSTNTAAYSFSLANLALTGKTRNGVMVAIGNVSIQELPFLYLLGLSASMLLLIFAPRLAIIIGKVAFRQYRPTILGII
VFLFLLGFLYDGILGVLVMISAMFLGFVAPLWKVRRVTYMGVLMFPILVESVI

Sequences:

>Translated_373_residues
MRELLQLIAGVGFGTLTGLTPGLHVNSLSRLSLPIPTLFVMGLVHTFLDSIPSALFGVPDADDSVPSLLPSHRLVLEGKF
GEVVKLSLFASTLALIFSIATLPAYFLVAPKYSFKIGIIFVVFLSLFLILSQGNKLGALVIFLLAGFLGYEVFSLPISDP
FYPLFTGLFALPLLVDSYLHPPKSVKVYDAPLRIPSWRLVKFSIFGTFFGALASLLPTLTAGQASLLGSKFTKDDREFLT
IVYSTNTAAYSFSLANLALTGKTRNGVMVAIGNVSIQELPFLYLLGLSASMLLLIFAPRLAIIIGKVAFRQYRPTILGII
VFLFLLGFLYDGILGVLVMISAMFLGFVAPLWKVRRVTYMGVLMFPILVESVI
>Mature_373_residues
MRELLQLIAGVGFGTLTGLTPGLHVNSLSRLSLPIPTLFVMGLVHTFLDSIPSALFGVPDADDSVPSLLPSHRLVLEGKF
GEVVKLSLFASTLALIFSIATLPAYFLVAPKYSFKIGIIFVVFLSLFLILSQGNKLGALVIFLLAGFLGYEVFSLPISDP
FYPLFTGLFALPLLVDSYLHPPKSVKVYDAPLRIPSWRLVKFSIFGTFFGALASLLPTLTAGQASLLGSKFTKDDREFLT
IVYSTNTAAYSFSLANLALTGKTRNGVMVAIGNVSIQELPFLYLLGLSASMLLLIFAPRLAIIIGKVAFRQYRPTILGII
VFLFLLGFLYDGILGVLVMISAMFLGFVAPLWKVRRVTYMGVLMFPILVESVI

Specific function: Unknown

COG id: COG1784

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002823 [H]

Pfam domain/function: PF01970 DUF112 [H]

EC number: NA

Molecular weight: Translated: 40618; Mature: 40618

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRELLQLIAGVGFGTLTGLTPGLHVNSLSRLSLPIPTLFVMGLVHTFLDSIPSALFGVPD
CHHHHHHHHCCCCHHHHCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
ADDSVPSLLPSHRLVLEGKFGEVVKLSLFASTLALIFSIATLPAYFLVAPKYSFKIGIIF
CCCCHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
VVFLSLFLILSQGNKLGALVIFLLAGFLGYEVFSLPISDPFYPLFTGLFALPLLVDSYLH
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHCC
PPKSVKVYDAPLRIPSWRLVKFSIFGTFFGALASLLPTLTAGQASLLGSKFTKDDREFLT
CCCCEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCEEEE
IVYSTNTAAYSFSLANLALTGKTRNGVMVAIGNVSIQELPFLYLLGLSASMLLLIFAPRL
EEEECCCCEEEEEEHHEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AIIIGKVAFRQYRPTILGIIVFLFLLGFLYDGILGVLVMISAMFLGFVAPLWKVRRVTYM
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVLMFPILVESVI
HHHHHHHHHHHCC
>Mature Secondary Structure
MRELLQLIAGVGFGTLTGLTPGLHVNSLSRLSLPIPTLFVMGLVHTFLDSIPSALFGVPD
CHHHHHHHHCCCCHHHHCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
ADDSVPSLLPSHRLVLEGKFGEVVKLSLFASTLALIFSIATLPAYFLVAPKYSFKIGIIF
CCCCHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
VVFLSLFLILSQGNKLGALVIFLLAGFLGYEVFSLPISDPFYPLFTGLFALPLLVDSYLH
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHCC
PPKSVKVYDAPLRIPSWRLVKFSIFGTFFGALASLLPTLTAGQASLLGSKFTKDDREFLT
CCCCEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCEEEE
IVYSTNTAAYSFSLANLALTGKTRNGVMVAIGNVSIQELPFLYLLGLSASMLLLIFAPRL
EEEECCCCEEEEEEHHEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AIIIGKVAFRQYRPTILGIIVFLFLLGFLYDGILGVLVMISAMFLGFVAPLWKVRRVTYM
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVLMFPILVESVI
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]