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The map label for this gene is 18976474

Identifier: 18976474

GI number: 18976474

Start: 108722

End: 109468

Strand: Direct

Name: 18976474

Synonym: PF0102

Alternate gene names: NA

Gene position: 108722-109468 (Clockwise)

Preceding gene: 18976473

Following gene: 18976475

Centisome position: 5.7

GC content: 37.48

Gene sequence:

>747_bases
ATGCCACTTCAACCAATTAGAAGAGTTAAAAGTGGAATTCCTGGATTTGATGAATTAATTGAGGGAGGTTTCCCTGAGGG
TACTACAGTTCTGCTAACTGGCGGAACTGGAACAGGAAAAACTACATTTGCAGCTCAATTTATCTATAAAGGAGCTGAAG
AATACGGAGAACCAGGAGTATTTGTAACATTGGAAGAGAGAGCTAAGGATTTGAGAAGGGAGATGGCCGCCTTTGGTTGG
GATTTTGAGAAGTATGAAAAGGAAGGTAAAATCGCAATAATAGATGGAGTCAGCTCTATTGCTGGAATTCCAAGTGAAGA
AAAATTCGTTTTAGAAGATAGATTTAATGTTGAAAACTTTCTAAGATACGTTTATAGGGTTGTCAAGGCTATTAATGCTA
AGAGGTTGGTCATTGATTCTATACCATCAATAGCTATGAGACTTGAAGAAGAAAATAGAATAAGAGAAGTCTTGCTAAAG
TTAAACACAATTTTACTTGAGATGGGAGTTACAACGATTTTAACTACTGAGGCGCCTGATCCTCAGCATGGGAGAATTAG
CAGGTATGGAATAGAGGAGTTCATAGCTAGAGGAGTAGTGATATTAGATTTACAAGAAAGGAATATTGAGTTGAAGAGGT
ACATCTTGATAAGAAAAATGCGTGGTACCAGACACTCAATGAAGAAGTATCCCTTTGAAATAGGACCAAATGGAATTGTC
GTGTATCCAAGTGGGGAAATTTATTAG

Upstream 100 bases:

>100_bases
TTTTGTAATTTTGACAGCCTAGGCACGAAAAGAAACAAAAGATTTATATTATTTTCTCCAAAGAAGTATTAGTTGAGCCA
AAGTCATCGAGGTGAGGCTC

Downstream 100 bases:

>100_bases
GTGATATTAATGGTCGTGAATGAAGTTGAGAATGTTGAGAATATAGAGGTTAGGGTAGAAAGAATTCCTACAGGGATTAT
TGATGATCTAATAAGTGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MPLQPIRRVKSGIPGFDELIEGGFPEGTTVLLTGGTGTGKTTFAAQFIYKGAEEYGEPGVFVTLEERAKDLRREMAAFGW
DFEKYEKEGKIAIIDGVSSIAGIPSEEKFVLEDRFNVENFLRYVYRVVKAINAKRLVIDSIPSIAMRLEEENRIREVLLK
LNTILLEMGVTTILTTEAPDPQHGRISRYGIEEFIARGVVILDLQERNIELKRYILIRKMRGTRHSMKKYPFEIGPNGIV
VYPSGEIY

Sequences:

>Translated_248_residues
MPLQPIRRVKSGIPGFDELIEGGFPEGTTVLLTGGTGTGKTTFAAQFIYKGAEEYGEPGVFVTLEERAKDLRREMAAFGW
DFEKYEKEGKIAIIDGVSSIAGIPSEEKFVLEDRFNVENFLRYVYRVVKAINAKRLVIDSIPSIAMRLEEENRIREVLLK
LNTILLEMGVTTILTTEAPDPQHGRISRYGIEEFIARGVVILDLQERNIELKRYILIRKMRGTRHSMKKYPFEIGPNGIV
VYPSGEIY
>Mature_247_residues
PLQPIRRVKSGIPGFDELIEGGFPEGTTVLLTGGTGTGKTTFAAQFIYKGAEEYGEPGVFVTLEERAKDLRREMAAFGWD
FEKYEKEGKIAIIDGVSSIAGIPSEEKFVLEDRFNVENFLRYVYRVVKAINAKRLVIDSIPSIAMRLEEENRIREVLLKL
NTILLEMGVTTILTTEAPDPQHGRISRYGIEEFIARGVVILDLQERNIELKRYILIRKMRGTRHSMKKYPFEIGPNGIVV
YPSGEIY

Specific function: Unknown

COG id: COG0467

COG function: function code T; RecA-superfamily ATPases implicated in signal transduction

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 kaiC domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014774
- InterPro:   IPR004504
- InterPro:   IPR010624
- InterPro:   IPR022475 [H]

Pfam domain/function: PF06745 KaiC [H]

EC number: NA

Molecular weight: Translated: 28106; Mature: 27975

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: PS51146 KAIC ; PS50162 RECA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLQPIRRVKSGIPGFDELIEGGFPEGTTVLLTGGTGTGKTTFAAQFIYKGAEEYGEPGV
CCCHHHHHHHCCCCCHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCE
FVTLEERAKDLRREMAAFGWDFEKYEKEGKIAIIDGVSSIAGIPSEEKFVLEDRFNVENF
EEEEHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEECCHHHHCCCCCCEEEECCCCCHHHH
LRYVYRVVKAINAKRLVIDSIPSIAMRLEEENRIREVLLKLNTILLEMGVTTILTTEAPD
HHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCC
PQHGRISRYGIEEFIARGVVILDLQERNIELKRYILIRKMRGTRHSMKKYPFEIGPNGIV
CCCCCCHHHCHHHHHHCCEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHCCCEECCCEEE
VYPSGEIY
EECCCCCC
>Mature Secondary Structure 
PLQPIRRVKSGIPGFDELIEGGFPEGTTVLLTGGTGTGKTTFAAQFIYKGAEEYGEPGV
CCHHHHHHHCCCCCHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCE
FVTLEERAKDLRREMAAFGWDFEKYEKEGKIAIIDGVSSIAGIPSEEKFVLEDRFNVENF
EEEEHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEECCHHHHCCCCCCEEEECCCCCHHHH
LRYVYRVVKAINAKRLVIDSIPSIAMRLEEENRIREVLLKLNTILLEMGVTTILTTEAPD
HHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCC
PQHGRISRYGIEEFIARGVVILDLQERNIELKRYILIRKMRGTRHSMKKYPFEIGPNGIV
CCCCCCHHHCHHHHHHCCEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHCCCEECCCEEE
VYPSGEIY
EECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA