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The map label for this gene is 18976475

Identifier: 18976475

GI number: 18976475

Start: 109478

End: 109963

Strand: Direct

Name: 18976475

Synonym: PF0103

Alternate gene names: NA

Gene position: 109478-109963 (Clockwise)

Preceding gene: 18976474

Following gene: 18976476

Centisome position: 5.74

GC content: 34.98

Gene sequence:

>486_bases
ATGGTCGTGAATGAAGTTGAGAATGTTGAGAATATAGAGGTTAGGGTAGAAAGAATTCCTACAGGGATTATTGATGATCT
AATAAGTGGAGGTATTCCAAGGGGTAGTGTAGTTCTTCTTATTGGGGATCCCAAAGCTGGAAAAAGCATTTTTATCTCTC
AGTTTACTAGTACTCAAGTAAGAAATGGAAATTATGTTATAGGTGTACTAATTGACATCTCTAAATATGAGTTTGTAAGC
AATGCTTTAGACTTTGGCTGGGAGTTTATGCCTTATCTTGATGATAAAATTGTCTTGCTTGATGCTTATACACAGAGGCT
TAGAAAAGCTCCGAAGTTCTCCTTTGATGAATCCGTCATTACAGATATAAGTGATACTACAAGGTTGTTAGATGCTATTA
AGGACACAACTTTAAGAATACTCTCTAACAACAAAAGCAGAAAATGTCGTTGGATTTATATCCTCTATGACACCAATATT
CTTTGA

Upstream 100 bases:

>100_bases
AATGCGTGGTACCAGACACTCAATGAAGAAGTATCCCTTTGAAATAGGACCAAATGGAATTGTCGTGTATCCAAGTGGGG
AAATTTATTAGGTGATATTA

Downstream 100 bases:

>100_bases
AACATCACGAAAAGAAATTTATAAGTTTTTAGAAGAGCTGAGAGAATTTGCACACAGAAACAAGCAAGTTTGGATTTTAG
AAATGAATTCGGGCATAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MVVNEVENVENIEVRVERIPTGIIDDLISGGIPRGSVVLLIGDPKAGKSIFISQFTSTQVRNGNYVIGVLIDISKYEFVS
NALDFGWEFMPYLDDKIVLLDAYTQRLRKAPKFSFDESVITDISDTTRLLDAIKDTTLRILSNNKSRKCRWIYILYDTNI
L

Sequences:

>Translated_161_residues
MVVNEVENVENIEVRVERIPTGIIDDLISGGIPRGSVVLLIGDPKAGKSIFISQFTSTQVRNGNYVIGVLIDISKYEFVS
NALDFGWEFMPYLDDKIVLLDAYTQRLRKAPKFSFDESVITDISDTTRLLDAIKDTTLRILSNNKSRKCRWIYILYDTNI
L
>Mature_161_residues
MVVNEVENVENIEVRVERIPTGIIDDLISGGIPRGSVVLLIGDPKAGKSIFISQFTSTQVRNGNYVIGVLIDISKYEFVS
NALDFGWEFMPYLDDKIVLLDAYTQRLRKAPKFSFDESVITDISDTTRLLDAIKDTTLRILSNNKSRKCRWIYILYDTNI
L

Specific function: Unknown

COG id: COG0467

COG function: function code T; RecA-superfamily ATPases implicated in signal transduction

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 kaiC domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014774
- InterPro:   IPR020588
- InterPro:   IPR004504
- InterPro:   IPR010624
- InterPro:   IPR022475 [H]

Pfam domain/function: PF06745 KaiC [H]

EC number: NA

Molecular weight: Translated: 18295; Mature: 18295

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVNEVENVENIEVRVERIPTGIIDDLISGGIPRGSVVLLIGDPKAGKSIFISQFTSTQV
CCCCCCCCCCEEEEEEEECCCHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEECCCCEE
RNGNYVIGVLIDISKYEFVSNALDFGWEFMPYLDDKIVLLDAYTQRLRKAPKFSFDESVI
CCCCEEEEEEEECCHHHHHHHHHHCCCEECCCCCCEEEEEHHHHHHHHCCCCCCCCCHHH
TDISDTTRLLDAIKDTTLRILSNNKSRKCRWIYILYDTNIL
HCCHHHHHHHHHHHHHEEEEECCCCCCEEEEEEEEEECCCC
>Mature Secondary Structure
MVVNEVENVENIEVRVERIPTGIIDDLISGGIPRGSVVLLIGDPKAGKSIFISQFTSTQV
CCCCCCCCCCEEEEEEEECCCHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEECCCCEE
RNGNYVIGVLIDISKYEFVSNALDFGWEFMPYLDDKIVLLDAYTQRLRKAPKFSFDESVI
CCCCEEEEEEEECCHHHHHHHHHHCCCEECCCCCCEEEEEHHHHHHHHCCCCCCCCCHHH
TDISDTTRLLDAIKDTTLRILSNNKSRKCRWIYILYDTNIL
HCCHHHHHHHHHHHHHEEEEECCCCCCEEEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11930014 [H]