| Definition | Pyrococcus furiosus DSM 3638, complete genome. |
|---|---|
| Accession | NC_003413 |
| Length | 1,908,256 |
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The map label for this gene is 18976461
Identifier: 18976461
GI number: 18976461
Start: 95567
End: 96568
Strand: Direct
Name: 18976461
Synonym: PF0089
Alternate gene names: NA
Gene position: 95567-96568 (Clockwise)
Preceding gene: 18976460
Following gene: 18976462
Centisome position: 5.01
GC content: 40.02
Gene sequence:
>1002_bases ATGCCTGCAGTGAAAGTTCCTAAGAAAGATGCAAAGAGGGTATTAGAACAACTCAAAGTCCTGGGAATATTTGATGGAAA AAGAAGACCTCTAAGAGATGAGAAATACGTATACTTTCCAATCCTTGACAAGGATAAAGCGGAGAGCCTTGGATTTGAGG TTGTAAATTTGGAAGCCCCTCTAAGGCCAGATAGACAAATTTACAAAAACTTGGAGGATTTACTTCCAAAGGACTTGGCA TCGAAGATTGGGAGGCTCGACATAGTTGGGGATATCGCCATTATTACTCTCCCAGATGAAGTTCTACCAAGAGTGGAGGA AGTTGCAAAGGCTATCAAAACGCTTTACCCTGAAGTTAAGGTGATTGCAAGGAGAGGTTTTCATGAGGGGGAGTTTAGAG TTAGAAATTTGGAAGTAGTTTGGGGAGAGAATCGGCTTGTAACCATTCATAAGGAAAATGGCGTTCTAATTAAGGTTGAT CTTTCAAAAGTTTTCTTTAATCCCAGGATGAAAGGAGAGAGGTACAGGATAGCCAAACTTGTCAAAGATGGGGAAAAGAT ATTAGTCCCTTTTGCGGGGGTTTTGCCTTATCCTCTCGTAATTGCAAAGTTCAGAAATGTTGAGATAACAGCCGTAGAGC TTAATCCTTATGCGGTTTCCCTGGGAATGGAAAACATAGAGCTTAACAAGAACAGACTGAAGGGCAAGATTAAGTTAATT CATGGAGATGTCTTTGAAGTTCTTCCCAAGTTGGGGACCTTTGATAGGGTGATAAGTCCCACTCCCAAAGGTGTTGACGC TTTGGAAATAACTTTATCAAAGGCTGAGAAATTTTTACACTACTATGACTTTGTTCATGAAGGAGAAATTGAGGTCTTCA AAAGGAGAATCGTTGAGATGTGTAGAGAGCTTGGAAAAGACTGCAACGTTAAAGTGAAGAAAGTTTCTGATTATAAGCCC CATATATACAAGGTTTGTGCGGACATAGAGATTAAACAATAA
Upstream 100 bases:
>100_bases TATGAGGATATGATTGCAGTCTTTGAGATACAGGCCACTTGGGGAAGCAGAAAGCTCTTGGGGATTTGGAAGATAAAGGG CGAAGTTCCATGGTGAGAAA
Downstream 100 bases:
>100_bases TGTTTACGTAAAAGTCTTTTATTTACTTTTTGCATTAAAATATTGGAGGTTACAGTGGATGCTAATTGATAAGTTTGGCA GGCCAGTAACGAACCTTAGA
Product: met-10+ protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MPAVKVPKKDAKRVLEQLKVLGIFDGKRRPLRDEKYVYFPILDKDKAESLGFEVVNLEAPLRPDRQIYKNLEDLLPKDLA SKIGRLDIVGDIAIITLPDEVLPRVEEVAKAIKTLYPEVKVIARRGFHEGEFRVRNLEVVWGENRLVTIHKENGVLIKVD LSKVFFNPRMKGERYRIAKLVKDGEKILVPFAGVLPYPLVIAKFRNVEITAVELNPYAVSLGMENIELNKNRLKGKIKLI HGDVFEVLPKLGTFDRVISPTPKGVDALEITLSKAEKFLHYYDFVHEGEIEVFKRRIVEMCRELGKDCNVKVKKVSDYKP HIYKVCADIEIKQ
Sequences:
>Translated_333_residues MPAVKVPKKDAKRVLEQLKVLGIFDGKRRPLRDEKYVYFPILDKDKAESLGFEVVNLEAPLRPDRQIYKNLEDLLPKDLA SKIGRLDIVGDIAIITLPDEVLPRVEEVAKAIKTLYPEVKVIARRGFHEGEFRVRNLEVVWGENRLVTIHKENGVLIKVD LSKVFFNPRMKGERYRIAKLVKDGEKILVPFAGVLPYPLVIAKFRNVEITAVELNPYAVSLGMENIELNKNRLKGKIKLI HGDVFEVLPKLGTFDRVISPTPKGVDALEITLSKAEKFLHYYDFVHEGEIEVFKRRIVEMCRELGKDCNVKVKKVSDYKP HIYKVCADIEIKQ >Mature_332_residues PAVKVPKKDAKRVLEQLKVLGIFDGKRRPLRDEKYVYFPILDKDKAESLGFEVVNLEAPLRPDRQIYKNLEDLLPKDLAS KIGRLDIVGDIAIITLPDEVLPRVEEVAKAIKTLYPEVKVIARRGFHEGEFRVRNLEVVWGENRLVTIHKENGVLIKVDL SKVFFNPRMKGERYRIAKLVKDGEKILVPFAGVLPYPLVIAKFRNVEITAVELNPYAVSLGMENIELNKNRLKGKIKLIH GDVFEVLPKLGTFDRVISPTPKGVDALEITLSKAEKFLHYYDFVHEGEIEVFKRRIVEMCRELGKDCNVKVKKVSDYKPH IYKVCADIEIKQ
Specific function: Unknown
COG id: COG2520
COG function: function code R; Predicted methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ1557 and to yeast YHR070w [H]
Homologues:
Organism=Homo sapiens, GI145275187, Length=248, Percent_Identity=27.8225806451613, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI45551508, Length=253, Percent_Identity=26.0869565217391, Blast_Score=74, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003402 [H]
Pfam domain/function: PF02475 Met_10 [H]
EC number: NA
Molecular weight: Translated: 38206; Mature: 38074
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAVKVPKKDAKRVLEQLKVLGIFDGKRRPLRDEKYVYFPILDKDKAESLGFEVVNLEAP CCCCCCCHHHHHHHHHHHHHEEEECCCCCCCCCCCEEEEEECCCCCHHHCCEEEEEECCC LRPDRQIYKNLEDLLPKDLASKIGRLDIVGDIAIITLPDEVLPRVEEVAKAIKTLYPEVK CCCCHHHHHHHHHHCHHHHHHHCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHCHHHH VIARRGFHEGEFRVRNLEVVWGENRLVTIHKENGVLIKVDLSKVFFNPRMKGERYRIAKL HHHHCCCCCCCEEEEEEEEEECCCEEEEEECCCCEEEEEEHHHHHCCCCCCCCHHHHHHH VKDGEKILVPFAGVLPYPLVIAKFRNVEITAVELNPYAVSLGMENIELNKNRLKGKIKLI HHCCCEEEEEHHHHCHHHHHHHHCCCEEEEEEEECCEEEEECCCCEEECCCCCCEEEEEE HGDVFEVLPKLGTFDRVISPTPKGVDALEITLSKAEKFLHYYDFVHEGEIEVFKRRIVEM ECHHHHHHHCCCCHHHHCCCCCCCCCHHEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHH CRELGKDCNVKVKKVSDYKPHIYKVCADIEIKQ HHHHCCCCCEEEEEECCCCCCCEEEEECCEECC >Mature Secondary Structure PAVKVPKKDAKRVLEQLKVLGIFDGKRRPLRDEKYVYFPILDKDKAESLGFEVVNLEAP CCCCCCHHHHHHHHHHHHHEEEECCCCCCCCCCCEEEEEECCCCCHHHCCEEEEEECCC LRPDRQIYKNLEDLLPKDLASKIGRLDIVGDIAIITLPDEVLPRVEEVAKAIKTLYPEVK CCCCHHHHHHHHHHCHHHHHHHCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHCHHHH VIARRGFHEGEFRVRNLEVVWGENRLVTIHKENGVLIKVDLSKVFFNPRMKGERYRIAKL HHHHCCCCCCCEEEEEEEEEECCCEEEEEECCCCEEEEEEHHHHHCCCCCCCCHHHHHHH VKDGEKILVPFAGVLPYPLVIAKFRNVEITAVELNPYAVSLGMENIELNKNRLKGKIKLI HHCCCEEEEEHHHHCHHHHHHHHCCCEEEEEEEECCEEEEECCCCEEECCCCCCEEEEEE HGDVFEVLPKLGTFDRVISPTPKGVDALEITLSKAEKFLHYYDFVHEGEIEVFKRRIVEM ECHHHHHHHCCCCHHHHCCCCCCCCCHHEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHH CRELGKDCNVKVKKVSDYKPHIYKVCADIEIKQ HHHHCCCCCEEEEEECCCCCCCEEEEECCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]