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The map label for this gene is yjfR [C]

Identifier: 18976392

GI number: 18976392

Start: 23182

End: 23814

Strand: Direct

Name: yjfR [C]

Synonym: PF0020

Alternate gene names: 18976392

Gene position: 23182-23814 (Clockwise)

Preceding gene: 33359447

Following gene: 18976393

Centisome position: 1.21

GC content: 46.29

Gene sequence:

>633_bases
ATGAAGATTGTGTGGTGTGGTCATGCCTGCTTCTTGGTGGAGGATAGGGGGACTAAGATACTAATCGATCCATACCCAGA
CGTTGATGAAGACAGAATAGGCAAGGTCGATTACATTCTAGTTACCCACGAGCACATGGATCACTACGGTAAGACCCCAC
TAATAGCAAAGCTCAGTGATGCCGAGGTTATAGGGCCGAAAACAGTTTATCTCATGGCAATAAGTGATGGGCTAACAAAG
GTCAGAGAGATAGAGGTGGGACAGGAAATCGAGCTGGGAGATATTAGGGTTAGGGCATTTTTCACAGAGCATCCAACAAG
CCAGTATCCCCTGGGATATCTAATTGAAGGAAGCAAAAGAGTGGCTCACTTGGGAGATACATACTACAGTCCAGCTTTTA
CAGAGTTGAGGGGAAAGGTTGATGTTCTTTTGGTTCCAATAGGTGGGAAGTCCACCGCTAGTGTAAGGGAGGCTGCGGAT
ATAGTGGAGATGATAAGGCCCAGGATAGCAGTTCCAATGCACTATGGAACGTACAGCGAGGCCGATCCTGAAGAGTTCAA
GAAGGAGCTCCAAAAAAGGCGCATATGGGTTTTAGTAAAGGATCTTAAGCCCTATGAGGGTTTTGAAATCTGA

Upstream 100 bases:

>100_bases
TAAAAAGAAGAAAGTTATAAGCTTGGACGACTTCTTCTCCAAACGCTGACCACAACTTTTAAGTTCTTTCTTGAGAATAA
ATTCCCAGGTGGCTTAGAGA

Downstream 100 bases:

>100_bases
AGGTGTTTCAATGCTAAATACTGAGCTCTTAACCACTGGAGTCAAGGGGTTAGATGAGCTTTTAGGTGGTGGAGTTGCTA
AGGGAGTAATACTCCAAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MKIVWCGHACFLVEDRGTKILIDPYPDVDEDRIGKVDYILVTHEHMDHYGKTPLIAKLSDAEVIGPKTVYLMAISDGLTK
VREIEVGQEIELGDIRVRAFFTEHPTSQYPLGYLIEGSKRVAHLGDTYYSPAFTELRGKVDVLLVPIGGKSTASVREAAD
IVEMIRPRIAVPMHYGTYSEADPEEFKKELQKRRIWVLVKDLKPYEGFEI

Sequences:

>Translated_210_residues
MKIVWCGHACFLVEDRGTKILIDPYPDVDEDRIGKVDYILVTHEHMDHYGKTPLIAKLSDAEVIGPKTVYLMAISDGLTK
VREIEVGQEIELGDIRVRAFFTEHPTSQYPLGYLIEGSKRVAHLGDTYYSPAFTELRGKVDVLLVPIGGKSTASVREAAD
IVEMIRPRIAVPMHYGTYSEADPEEFKKELQKRRIWVLVKDLKPYEGFEI
>Mature_210_residues
MKIVWCGHACFLVEDRGTKILIDPYPDVDEDRIGKVDYILVTHEHMDHYGKTPLIAKLSDAEVIGPKTVYLMAISDGLTK
VREIEVGQEIELGDIRVRAFFTEHPTSQYPLGYLIEGSKRVAHLGDTYYSPAFTELRGKVDVLLVPIGGKSTASVREAAD
IVEMIRPRIAVPMHYGTYSEADPEEFKKELQKRRIWVLVKDLKPYEGFEI

Specific function: Unknown

COG id: COG2220

COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0173 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y020_PYRFU (P81414)

Other databases:

- EMBL:   D84670
- EMBL:   AE009950
- PIR:   T43935
- RefSeq:   NP_577749.1
- ProteinModelPortal:   P81414
- EnsemblBacteria:   EBPYRT00000004257
- GeneID:   1467848
- GenomeReviews:   AE009950_GR
- KEGG:   pfu:PF0020
- NMPDR:   fig|186497.1.peg.20
- GeneTree:   EBGT00050000022821
- HOGENOM:   HBG741314
- OMA:   KTVYLMA
- ProtClustDB:   CLSK253097
- InterPro:   IPR001279
- SMART:   SM00849

Pfam domain/function: PF00753 Lactamase_B

EC number: NA

Molecular weight: Translated: 23836; Mature: 23836

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIVWCGHACFLVEDRGTKILIDPYPDVDEDRIGKVDYILVTHEHMDHYGKTPLIAKLSD
CEEEEECCEEEEEECCCCEEEECCCCCCCCCCCCCEEEEEEEEHHHHHCCCCCEEEEECC
AEVIGPKTVYLMAISDGLTKVREIEVGQEIELGDIRVRAFFTEHPTSQYPLGYLIEGSKR
CEEECCCEEEEEEECCCCCEEEEECCCCEEEECCEEEEEEEECCCCCCCCCEEEEECCCE
VAHLGDTYYSPAFTELRGKVDVLLVPIGGKSTASVREAADIVEMIRPRIAVPMHYGTYSE
EEECCCCCCCCCHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCC
ADPEEFKKELQKRRIWVLVKDLKPYEGFEI
CCHHHHHHHHHHCEEEEEEECCCCCCCCCC
>Mature Secondary Structure
MKIVWCGHACFLVEDRGTKILIDPYPDVDEDRIGKVDYILVTHEHMDHYGKTPLIAKLSD
CEEEEECCEEEEEECCCCEEEECCCCCCCCCCCCCEEEEEEEEHHHHHCCCCCEEEEECC
AEVIGPKTVYLMAISDGLTKVREIEVGQEIELGDIRVRAFFTEHPTSQYPLGYLIEGSKR
CEEECCCEEEEEEECCCCCEEEEECCCCEEEECCEEEEEEEECCCCCCCCCEEEEECCCE
VAHLGDTYYSPAFTELRGKVDVLLVPIGGKSTASVREAADIVEMIRPRIAVPMHYGTYSE
EEECCCCCCCCCHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCC
ADPEEFKKELQKRRIWVLVKDLKPYEGFEI
CCHHHHHHHHHHCEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9348040