Click here to switch to the map view.

The map label for this gene is yidD [C]

Identifier: 18311640

GI number: 18311640

Start: 3030056

End: 3030265

Strand: Reverse

Name: yidD [C]

Synonym: CPE2658

Alternate gene names: 18311640

Gene position: 3030265-3030056 (Counterclockwise)

Preceding gene: 18311641

Following gene: 18311639

Centisome position: 99.96

GC content: 30.0

Gene sequence:

>210_bases
ATGAAAAAATTGTTCATAGTAATGATTAAATTCTATAGAAAATATATTTCACCTTTAAAGAGGCCTTGTTGCAGATTTTA
TCCAACTTGTTCTCAATATGCACTAGAAGCAATACAAAAGTATGGTGCTTTTAAAGGGGGATTTATGAGTATAGGAAGAA
TATTAAGGTGTAATCCATTCTGTAAGGGTGGATATGATCCTGTAAAATAA

Upstream 100 bases:

>100_bases
GACTTTGTGTTTATTGCTAGAGTTGCTATAAACGGTAAGGATTTTAAGCAAGTAGGGAAAGCCATGAATAATTTAATAAA
AAAGGCAGGTCTACGTGATA

Downstream 100 bases:

>100_bases
ATATATACGGTTTAAATATAGGAGGGTAATGTATTGCAGTCAATTTTAAAGCCGATAACTAATTTATTCACAATGATATT
TCAAGCTATCCACGGCTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 69; Mature: 69

Protein sequence:

>69_residues
MKKLFIVMIKFYRKYISPLKRPCCRFYPTCSQYALEAIQKYGAFKGGFMSIGRILRCNPFCKGGYDPVK

Sequences:

>Translated_69_residues
MKKLFIVMIKFYRKYISPLKRPCCRFYPTCSQYALEAIQKYGAFKGGFMSIGRILRCNPFCKGGYDPVK
>Mature_69_residues
MKKLFIVMIKFYRKYISPLKRPCCRFYPTCSQYALEAIQKYGAFKGGFMSIGRILRCNPFCKGGYDPVK

Specific function: Unknown

COG id: COG0759

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0161 family

Homologues:

Organism=Escherichia coli, GI87082322, Length=67, Percent_Identity=44.7761194029851, Blast_Score=77, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2658_CLOPE (Q8XH27)

Other databases:

- EMBL:   BA000016
- RefSeq:   NP_563574.1
- GeneID:   989324
- GenomeReviews:   BA000016_GR
- KEGG:   cpe:CPE2658
- NMPDR:   fig|195102.1.peg.2721
- HOGENOM:   HBG634291
- OMA:   WLATTVI
- ProtClustDB:   CLSK2516842
- BioCyc:   CPER195102:CPE2658-MONOMER
- HAMAP:   MF_00386
- InterPro:   IPR002696
- ProDom:   PD004225
- TIGRFAMs:   TIGR00278

Pfam domain/function: PF01809 DUF37

EC number: NA

Molecular weight: Translated: 8072; Mature: 8072

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
11.6 %Cys+Met (Translated Protein)
7.2 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
11.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLFIVMIKFYRKYISPLKRPCCRFYPTCSQYALEAIQKYGAFKGGFMSIGRILRCNPF
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC
CKGGYDPVK
CCCCCCCCC
>Mature Secondary Structure
MKKLFIVMIKFYRKYISPLKRPCCRFYPTCSQYALEAIQKYGAFKGGFMSIGRILRCNPF
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC
CKGGYDPVK
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11792842