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The map label for this gene is spoIIIJ

Identifier: 18311639

GI number: 18311639

Start: 3029306

End: 3030022

Strand: Reverse

Name: spoIIIJ

Synonym: CPE2657

Alternate gene names: 18311639

Gene position: 3030022-3029306 (Counterclockwise)

Preceding gene: 18311640

Following gene: 18311638

Centisome position: 99.95

GC content: 30.96

Gene sequence:

>717_bases
TTGCAGTCAATTTTAAAGCCGATAACTAATTTATTCACAATGATATTTCAAGCTATCCACGGCTTTGTTGCCTCACTAGA
TATTTTTGGTGTAGGTGCTGGATACGTAATAACTATTTTCTTATTAACTTTATTAGTAAGATTAATATTATTACCGCTAA
ATATAAAGCAAACTAGATCTCAACAAAAGATGCAAGAAATACAGCCAGAAATAGCTAAACTTCAGAAGAAATATAAAAAT
AATCCTGAAAAAGCTCAACAAGAAATGATGAAGCTTTATAAGGAGAATAATGTAAACCCAATGAGTGGTTGTTTACCTTT
ATTAATCCAAATGCCAATATTATTTGCATTATACTATGTATTTACTGGATTAACTGAGTTACAAGGTGTATCATTCTTAT
GGTTAGGAGATTTATGGGCTCCAGATAGAACATTCATATTACCAATTTTATCAGCTGCAACAACATATTTATCATCTTTA
TTAATGACAAAGTTTACTCAGTCACAAGCTGGGGGAGCACCTGGTGGAATGAATATGAATACTATGAATATAGTAATGGC
TGGTATGATGGGTGTAATGTCAATACAATTCCCATCAATGCTTGTATTATACTGGGTAATAGGTAACCTAATTCAAATGG
TTCAAACATACTTCATAGTTGTTTTACCTAGCAAAAAGAGAGCTAAGGAAAAAGAACAATATAAAGATATTAAGTAA

Upstream 100 bases:

>100_bases
TATGAGTATAGGAAGAATATTAAGGTGTAATCCATTCTGTAAGGGTGGATATGATCCTGTAAAATAAATATATACGGTTT
AAATATAGGAGGGTAATGTA

Downstream 100 bases:

>100_bases
TAATAATTTATTTTGCTTTTCTAAGGTGGTGAAACAAGGGTATGAATACAATTGAGATTACTGGAAAGACTGTTGAAGAA
GCTTTAAAAAGCGCATTGGA

Product: putative inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MQSILKPITNLFTMIFQAIHGFVASLDIFGVGAGYVITIFLLTLLVRLILLPLNIKQTRSQQKMQEIQPEIAKLQKKYKN
NPEKAQQEMMKLYKENNVNPMSGCLPLLIQMPILFALYYVFTGLTELQGVSFLWLGDLWAPDRTFILPILSAATTYLSSL
LMTKFTQSQAGGAPGGMNMNTMNIVMAGMMGVMSIQFPSMLVLYWVIGNLIQMVQTYFIVVLPSKKRAKEKEQYKDIK

Sequences:

>Translated_238_residues
MQSILKPITNLFTMIFQAIHGFVASLDIFGVGAGYVITIFLLTLLVRLILLPLNIKQTRSQQKMQEIQPEIAKLQKKYKN
NPEKAQQEMMKLYKENNVNPMSGCLPLLIQMPILFALYYVFTGLTELQGVSFLWLGDLWAPDRTFILPILSAATTYLSSL
LMTKFTQSQAGGAPGGMNMNTMNIVMAGMMGVMSIQFPSMLVLYWVIGNLIQMVQTYFIVVLPSKKRAKEKEQYKDIK
>Mature_238_residues
MQSILKPITNLFTMIFQAIHGFVASLDIFGVGAGYVITIFLLTLLVRLILLPLNIKQTRSQQKMQEIQPEIAKLQKKYKN
NPEKAQQEMMKLYKENNVNPMSGCLPLLIQMPILFALYYVFTGLTELQGVSFLWLGDLWAPDRTFILPILSAATTYLSSL
LMTKFTQSQAGGAPGGMNMNTMNIVMAGMMGVMSIQFPSMLVLYWVIGNLIQMVQTYFIVVLPSKKRAKEKEQYKDIK

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 3 subfamily

Homologues:

Organism=Escherichia coli, GI1790140, Length=222, Percent_Identity=35.1351351351351, Blast_Score=120, Evalue=7e-29,
Organism=Drosophila melanogaster, GI24662345, Length=206, Percent_Identity=29.6116504854369, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI21356443, Length=206, Percent_Identity=29.6116504854369, Blast_Score=74, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): OXAA_CLOPE (Q8XH28)

Other databases:

- EMBL:   BA000016
- RefSeq:   NP_563573.1
- GeneID:   989317
- GenomeReviews:   BA000016_GR
- KEGG:   cpe:CPE2657
- NMPDR:   fig|195102.1.peg.2720
- HOGENOM:   HBG560622
- OMA:   HSFLWFD
- ProtClustDB:   PRK00145
- BioCyc:   CPER195102:CPE2657-MONOMER
- HAMAP:   MF_01810
- InterPro:   IPR001708
- PANTHER:   PTHR12428
- PRINTS:   PR00701
- TIGRFAMs:   TIGR03592

Pfam domain/function: PF02096 60KD_IMP

EC number: NA

Molecular weight: Translated: 26932; Mature: 26932

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x10fa32b4)-; HASH(0x10e691ec)-; HASH(0xd92fcbc)-; HASH(0x112a3f20)-; HASH(0x102c3af8)-; HASH(0x10d2709c)-;

Cys/Met content:

0.4 %Cys     (Translated Protein)
7.1 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
7.1 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSILKPITNLFTMIFQAIHGFVASLDIFGVGAGYVITIFLLTLLVRLILLPLNIKQTRS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH
QQKMQEIQPEIAKLQKKYKNNPEKAQQEMMKLYKENNVNPMSGCLPLLIQMPILFALYYV
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
FTGLTELQGVSFLWLGDLWAPDRTFILPILSAATTYLSSLLMTKFTQSQAGGAPGGMNMN
HHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
TMNIVMAGMMGVMSIQFPSMLVLYWVIGNLIQMVQTYFIVVLPSKKRAKEKEQYKDIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHCCCH
>Mature Secondary Structure
MQSILKPITNLFTMIFQAIHGFVASLDIFGVGAGYVITIFLLTLLVRLILLPLNIKQTRS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH
QQKMQEIQPEIAKLQKKYKNNPEKAQQEMMKLYKENNVNPMSGCLPLLIQMPILFALYYV
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
FTGLTELQGVSFLWLGDLWAPDRTFILPILSAATTYLSSLLMTKFTQSQAGGAPGGMNMN
HHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
TMNIVMAGMMGVMSIQFPSMLVLYWVIGNLIQMVQTYFIVVLPSKKRAKEKEQYKDIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11792842