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The map label for this gene is ycgF [H]

Identifier: 18311628

GI number: 18311628

Start: 3018004

End: 3018651

Strand: Direct

Name: ycgF [H]

Synonym: CPE2646

Alternate gene names: 18311628

Gene position: 3018004-3018651 (Clockwise)

Preceding gene: 18311608

Following gene: 18311629

Centisome position: 99.56

GC content: 28.86

Gene sequence:

>648_bases
ATGTCTTTTTTCTATTTAAAGGCTATTTTATCTGGAATTGTAACAGGCCTATTAGTTTCTATACCATTAGGTCCAGCTGC
AATAGAGGCTGCAACACAATCTCTAGATAAAGGATTTAAAAAAGGCTTTGAAGTTTCATTAGGCGCAATAGCTGCTGACT
ATTTGTACATATTATTAATAAACTTCGGAGTAGCCCAATTATTAAATTTAAATAGGTATGTAGAATGTGCCTTTTGGATT
ATTTCAGGATTAGTTCTTATAATAGTTAATTTAATATTTAAATCTTCTCAAAAAAGTTTAGACGAAAAATGTGTTGAAAC
TATAGATAGTCATAAAACTGGTAATGGTTTTATAAATGGTTTTTTAATAACCTTTGTAAACCCTATGACTTTATCAGTAT
GGATGGCTGTAAGTGCTGGAATAATGAGTATATGGAAACTTTCAGGTAGACATTTCTTTTTAGTAGCCATAAGTGCTATG
TTTATAACAACTTTAGCTTGGTTTATATTATTAAATTTTATGGCTGCCAAAGGTGGAAGTCTAGTAAAAAAAGAACTTAC
TGGTAAGGCTGATAAAAGTGTAAAATATTTTATGATTTTACTTGGATTAGGATTTACTATATACGGAATATTTAAAATTT
TTATGTGA

Upstream 100 bases:

>100_bases
TAAAAGTTAACACTTTCAAAATAAGGGTGAAAGCTTTTCTATTTTGAACTATAATATAATTATGTAAATTTATAAAAACA
ACTGTAAAAGGAGTTTGAGT

Downstream 100 bases:

>100_bases
GGTTTTTGCTTATGAATAAAATATATTTTGATAATGCAGCAACTACTTTCCCTAAACCTGACTCTGTAATAAAAGCAATG
TTTGATTACATGAGTTTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 214

Protein sequence:

>215_residues
MSFFYLKAILSGIVTGLLVSIPLGPAAIEAATQSLDKGFKKGFEVSLGAIAADYLYILLINFGVAQLLNLNRYVECAFWI
ISGLVLIIVNLIFKSSQKSLDEKCVETIDSHKTGNGFINGFLITFVNPMTLSVWMAVSAGIMSIWKLSGRHFFLVAISAM
FITTLAWFILLNFMAAKGGSLVKKELTGKADKSVKYFMILLGLGFTIYGIFKIFM

Sequences:

>Translated_215_residues
MSFFYLKAILSGIVTGLLVSIPLGPAAIEAATQSLDKGFKKGFEVSLGAIAADYLYILLINFGVAQLLNLNRYVECAFWI
ISGLVLIIVNLIFKSSQKSLDEKCVETIDSHKTGNGFINGFLITFVNPMTLSVWMAVSAGIMSIWKLSGRHFFLVAISAM
FITTLAWFILLNFMAAKGGSLVKKELTGKADKSVKYFMILLGLGFTIYGIFKIFM
>Mature_214_residues
SFFYLKAILSGIVTGLLVSIPLGPAAIEAATQSLDKGFKKGFEVSLGAIAADYLYILLINFGVAQLLNLNRYVECAFWII
SGLVLIIVNLIFKSSQKSLDEKCVETIDSHKTGNGFINGFLITFVNPMTLSVWMAVSAGIMSIWKLSGRHFFLVAISAMF
ITTLAWFILLNFMAAKGGSLVKKELTGKADKSVKYFMILLGLGFTIYGIFKIFM

Specific function: Unknown

COG id: COG1280

COG function: function code E; Putative threonine efflux protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rht family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 23611; Mature: 23479

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFFYLKAILSGIVTGLLVSIPLGPAAIEAATQSLDKGFKKGFEVSLGAIAADYLYILLI
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
NFGVAQLLNLNRYVECAFWIISGLVLIIVNLIFKSSQKSLDEKCVETIDSHKTGNGFING
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
FLITFVNPMTLSVWMAVSAGIMSIWKLSGRHFFLVAISAMFITTLAWFILLNFMAAKGGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
LVKKELTGKADKSVKYFMILLGLGFTIYGIFKIFM
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SFFYLKAILSGIVTGLLVSIPLGPAAIEAATQSLDKGFKKGFEVSLGAIAADYLYILLI
CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
NFGVAQLLNLNRYVECAFWIISGLVLIIVNLIFKSSQKSLDEKCVETIDSHKTGNGFING
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
FLITFVNPMTLSVWMAVSAGIMSIWKLSGRHFFLVAISAMFITTLAWFILLNFMAAKGGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
LVKKELTGKADKSVKYFMILLGLGFTIYGIFKIFM
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]