| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18311610
Identifier: 18311610
GI number: 18311610
Start: 3003338
End: 3003601
Strand: Reverse
Name: 18311610
Synonym: CPE2628
Alternate gene names: NA
Gene position: 3003601-3003338 (Counterclockwise)
Preceding gene: 18311611
Following gene: 18311609
Centisome position: 99.08
GC content: 25.76
Gene sequence:
>264_bases ATGAAAACTTTTATGATTATTTTATTAGTTCTAGTAGCAGTATTTTTAGTTTGGTATATTGTTAGTTTTAAAGGTGTTAA CAAAGATAAAGCTAGGATAATAGAGCAACAGATTAATTTAAAAGTAGGCTCAAATGTTGTTTTAAGTAGTGGTATACATG GAAAGGTTTCAAAGGTTAATAAAGAAACTGTAGAGATTATAATAGACAAAACAAAAAATATTACTATGACTGTAGAAAGG TATTGTGTCTCTAAGGTTTTATAA
Upstream 100 bases:
>100_bases AGTGATATAAAAGAATTAGTTGAAAAGATAAAAAATGATGGCAAAGATAGTGTTTGTAGTGTGAGAGAATTATTAAACAT ATAAGAAAGTGGGGAGACCA
Downstream 100 bases:
>100_bases AATTGAAAATAATTATTTTTAAAGACTCACAGTTTGTATATACTGTGAGTTTATGCTTTATAGAGAAAAACATTGAAAAA AAATAGTAAATATGATAACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 87; Mature: 87
Protein sequence:
>87_residues MKTFMIILLVLVAVFLVWYIVSFKGVNKDKARIIEQQINLKVGSNVVLSSGIHGKVSKVNKETVEIIIDKTKNITMTVER YCVSKVL
Sequences:
>Translated_87_residues MKTFMIILLVLVAVFLVWYIVSFKGVNKDKARIIEQQINLKVGSNVVLSSGIHGKVSKVNKETVEIIIDKTKNITMTVER YCVSKVL >Mature_87_residues MKTFMIILLVLVAVFLVWYIVSFKGVNKDKARIIEQQINLKVGSNVVLSSGIHGKVSKVNKETVEIIIDKTKNITMTVER YCVSKVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9824; Mature: 9824
Theoretical pI: Translated: 10.49; Mature: 10.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTFMIILLVLVAVFLVWYIVSFKGVNKDKARIIEQQINLKVGSNVVLSSGIHGKVSKVN CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHCC KETVEIIIDKTKNITMTVERYCVSKVL HHHHHHEEECCCCEEHHHHHHHHHHCC >Mature Secondary Structure MKTFMIILLVLVAVFLVWYIVSFKGVNKDKARIIEQQINLKVGSNVVLSSGIHGKVSKVN CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHCC KETVEIIIDKTKNITMTVERYCVSKVL HHHHHHEEECCCCEEHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA