| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is purA
Identifier: 18311604
GI number: 18311604
Start: 2996805
End: 2998091
Strand: Reverse
Name: purA
Synonym: CPE2622
Alternate gene names: 18311604
Gene position: 2998091-2996805 (Counterclockwise)
Preceding gene: 18311609
Following gene: 18311603
Centisome position: 98.9
GC content: 33.8
Gene sequence:
>1287_bases ATGTCAGCATTTGTTGTATTAGGAGCTCAATGGGGAGACGAAGGAAAAGGAAAGATGACAGATTACTTAGCAGAAGAGGC AGAAGTAGTTGTTAGATTCCAAGGAGGAAATAACGCTGGACATACAGTTGAAGTTGAAGACAAACAATACAAGTTACACT TAATACCTTCAGGAATATTACATGACGAGAAATTAAACGTAATAGGAAATGGTGTTGTAGTAGATCCTAAAGCACTATTT ACAGAAATAGATTATTTAGAAGGCTTAGGAGTAAAAGTAACTCCAGAGAAATTAATAGTTAGTGATAGAGCACATCTTAT AATGCCATACCACATAACTTTAGATAAGTTAAAAGAAAAAGCTAGAGGAAAAAATGATATAGGAACTACTTGCAAAGGAA TAGGTCCTTGTTATACAGATAAATATGAAAGATCAGGAATAAGAGTTTGTGACCTTATGCACAAAGATTCTTTCGCTGAA AAATTAAGAATAAACATCGAAATGAAAAATGGATACATCAAATTATTAGGTGGAGAAGAGTTAAACTTCGATGAAATATA TAATGAATATATGGCATTTGCTGAAAGATTAAGACCATATGTTAAAGATACTTCAGTTGAAATATACAATGCTATCCAAG CTGATAAAAATGTATTATTTGAAGGAGCTCAAGGAATGCTTCTTGATATAGACTATGGAACTTATCCATATGTTACATCA TCAAACACAACTTCATGTGGAGTTGCTAGTGGAGCAGGTATAGGACCAAACATGGTAACTAATGCTGTTGGTATAGCTAA AGCTTACACTACAAGAGTTGGTAAAGGACCATTCCCAACAGAGCTTGAAAACGAAACTGGTGATTGGATAAGAGAAAAAG GTCATGAGTACGGAGTAACTACAGGAAGATCAAGAAGATGTGGTTGGTTAGACCTTGTTATCTTAAAAACTACTACAAGA GTTTGTGGATTAACTTCATTAGTAGTAACTAAAATAGATACATTAGCTGGATTAGATAAAATACAAATGTGTGTTGGATA TGAATTAGATGGAAAAGTTATAGATTACTTCCCAGCTAGTTTAGAAGATTTAGCTAGATGTAAACCAGTATATGAAGAGT TCGAAGGATGGGGAGAAGAAGTTGCTGATGCAAGAAGCTACGAAGAGTTACCAGAGAACGCTAAAACTTACTTAAGAAGA ATAGAAGAGTTCACAGGAACTAAAGTTTCTATAGTTGGTGTTGGACCAAAGAGAAATCAAACTATAAGAGTAAGAGAAGA ACTTTAA
Upstream 100 bases:
>100_bases CCTATAAATACGAACGTTGTCTACTCGGAAAAAGTTAATTAACCGTTATGGTTTATAAAAAAAGAATGTTAATGTTCTTT TTATAAGGAGGAAATAAAAA
Downstream 100 bases:
>100_bases TAAGTAGTAAAGAATAATTAGTTTAAAATAGCTTAAGATTATTTAATCTTAAGCTATTTTTTATTTTAGGGTATAATATT TTTAAATTAATTTAGAATAA
Product: adenylosuccinate synthetase
Products: NA
Alternate protein names: AMPSase; AdSS; IMP--aspartate ligase
Number of amino acids: Translated: 428; Mature: 427
Protein sequence:
>428_residues MSAFVVLGAQWGDEGKGKMTDYLAEEAEVVVRFQGGNNAGHTVEVEDKQYKLHLIPSGILHDEKLNVIGNGVVVDPKALF TEIDYLEGLGVKVTPEKLIVSDRAHLIMPYHITLDKLKEKARGKNDIGTTCKGIGPCYTDKYERSGIRVCDLMHKDSFAE KLRINIEMKNGYIKLLGGEELNFDEIYNEYMAFAERLRPYVKDTSVEIYNAIQADKNVLFEGAQGMLLDIDYGTYPYVTS SNTTSCGVASGAGIGPNMVTNAVGIAKAYTTRVGKGPFPTELENETGDWIREKGHEYGVTTGRSRRCGWLDLVILKTTTR VCGLTSLVVTKIDTLAGLDKIQMCVGYELDGKVIDYFPASLEDLARCKPVYEEFEGWGEEVADARSYEELPENAKTYLRR IEEFTGTKVSIVGVGPKRNQTIRVREEL
Sequences:
>Translated_428_residues MSAFVVLGAQWGDEGKGKMTDYLAEEAEVVVRFQGGNNAGHTVEVEDKQYKLHLIPSGILHDEKLNVIGNGVVVDPKALF TEIDYLEGLGVKVTPEKLIVSDRAHLIMPYHITLDKLKEKARGKNDIGTTCKGIGPCYTDKYERSGIRVCDLMHKDSFAE KLRINIEMKNGYIKLLGGEELNFDEIYNEYMAFAERLRPYVKDTSVEIYNAIQADKNVLFEGAQGMLLDIDYGTYPYVTS SNTTSCGVASGAGIGPNMVTNAVGIAKAYTTRVGKGPFPTELENETGDWIREKGHEYGVTTGRSRRCGWLDLVILKTTTR VCGLTSLVVTKIDTLAGLDKIQMCVGYELDGKVIDYFPASLEDLARCKPVYEEFEGWGEEVADARSYEELPENAKTYLRR IEEFTGTKVSIVGVGPKRNQTIRVREEL >Mature_427_residues SAFVVLGAQWGDEGKGKMTDYLAEEAEVVVRFQGGNNAGHTVEVEDKQYKLHLIPSGILHDEKLNVIGNGVVVDPKALFT EIDYLEGLGVKVTPEKLIVSDRAHLIMPYHITLDKLKEKARGKNDIGTTCKGIGPCYTDKYERSGIRVCDLMHKDSFAEK LRINIEMKNGYIKLLGGEELNFDEIYNEYMAFAERLRPYVKDTSVEIYNAIQADKNVLFEGAQGMLLDIDYGTYPYVTSS NTTSCGVASGAGIGPNMVTNAVGIAKAYTTRVGKGPFPTELENETGDWIREKGHEYGVTTGRSRRCGWLDLVILKTTTRV CGLTSLVVTKIDTLAGLDKIQMCVGYELDGKVIDYFPASLEDLARCKPVYEEFEGWGEEVADARSYEELPENAKTYLRRI EEFTGTKVSIVGVGPKRNQTIRVREEL
Specific function: Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP
COG id: COG0104
COG function: function code F; Adenylosuccinate synthase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylosuccinate synthetase family
Homologues:
Organism=Homo sapiens, GI22748717, Length=426, Percent_Identity=46.9483568075117, Blast_Score=384, Evalue=1e-107, Organism=Homo sapiens, GI34577063, Length=428, Percent_Identity=44.8598130841121, Blast_Score=370, Evalue=1e-102, Organism=Homo sapiens, GI40316944, Length=397, Percent_Identity=45.3400503778337, Blast_Score=342, Evalue=5e-94, Organism=Escherichia coli, GI1790620, Length=424, Percent_Identity=47.4056603773585, Blast_Score=399, Evalue=1e-112, Organism=Caenorhabditis elegans, GI25146553, Length=429, Percent_Identity=44.7552447552448, Blast_Score=349, Evalue=1e-96, Organism=Caenorhabditis elegans, GI25146555, Length=429, Percent_Identity=44.7552447552448, Blast_Score=349, Evalue=2e-96, Organism=Saccharomyces cerevisiae, GI6324109, Length=429, Percent_Identity=44.988344988345, Blast_Score=379, Evalue=1e-106, Organism=Drosophila melanogaster, GI21356033, Length=423, Percent_Identity=43.4988179669031, Blast_Score=366, Evalue=1e-101,
Paralogues:
None
Copy number: 940 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): PURA_CLOPE (Q8XH63)
Other databases:
- EMBL: BA000016 - RefSeq: NP_563538.1 - ProteinModelPortal: Q8XH63 - SMR: Q8XH63 - GeneID: 989276 - GenomeReviews: BA000016_GR - KEGG: cpe:CPE2622 - NMPDR: fig|195102.1.peg.2685 - HOGENOM: HBG658237 - OMA: DYVVRYQ - PhylomeDB: Q8XH63 - ProtClustDB: PRK01117 - BioCyc: CPER195102:CPE2622-MONOMER - BRENDA: 6.3.4.4 - GO: GO:0005737 - HAMAP: MF_00011 - InterPro: IPR018220 - InterPro: IPR001114 - PANTHER: PTHR11846 - SMART: SM00788 - TIGRFAMs: TIGR00184
Pfam domain/function: PF00709 Adenylsucc_synt
EC number: =6.3.4.4
Molecular weight: Translated: 47591; Mature: 47460
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: PS01266 ADENYLOSUCCIN_SYN_1; PS00513 ADENYLOSUCCIN_SYN_2; PS00014 ER_TARGET
Important sites: ACT_SITE 13-13 ACT_SITE 41-41 BINDING 130-130 BINDING 144-144 BINDING 224-224 BINDING 239-239 BINDING 303-303 BINDING 305-305
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAFVVLGAQWGDEGKGKMTDYLAEEAEVVVRFQGGNNAGHTVEVEDKQYKLHLIPSGIL CCEEEEEEECCCCCCCCHHHHHHHCCEEEEEEEECCCCCCCEEEEECCEEEEEECCCCCC HDEKLNVIGNGVVVDPKALFTEIDYLEGLGVKVTPEKLIVSDRAHLIMPYHITLDKLKEK CCCCEEEEECCEEECCHHHHHHHHHHCCCCCEECHHHHEECCCCEEEEEEEEEHHHHHHH ARGKNDIGTTCKGIGPCYTDKYERSGIRVCDLMHKDSFAEKLRINIEMKNGYIKLLGGEE HCCCCCCCCCCCCCCCCCCCCHHCCCCEEEHHHHHCCCCEEEEEEEEEECCEEEEECCCC LNFDEIYNEYMAFAERLRPYVKDTSVEIYNAIQADKNVLFEGAQGMLLDIDYGTYPYVTS CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHEEECCCCEEEEECCCCCCEEEC SNTTSCGVASGAGIGPNMVTNAVGIAKAYTTRVGKGPFPTELENETGDWIREKGHEYGVT CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCC TGRSRRCGWLDLVILKTTTRVCGLTSLVVTKIDTLAGLDKIQMCVGYELDGKVIDYFPAS CCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCEEECCCCC LEDLARCKPVYEEFEGWGEEVADARSYEELPENAKTYLRRIEEFTGTKVSIVGVGPKRNQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCEEEEEECCCCCCC TIRVREEL EEEEEECC >Mature Secondary Structure SAFVVLGAQWGDEGKGKMTDYLAEEAEVVVRFQGGNNAGHTVEVEDKQYKLHLIPSGIL CEEEEEEECCCCCCCCHHHHHHHCCEEEEEEEECCCCCCCEEEEECCEEEEEECCCCCC HDEKLNVIGNGVVVDPKALFTEIDYLEGLGVKVTPEKLIVSDRAHLIMPYHITLDKLKEK CCCCEEEEECCEEECCHHHHHHHHHHCCCCCEECHHHHEECCCCEEEEEEEEEHHHHHHH ARGKNDIGTTCKGIGPCYTDKYERSGIRVCDLMHKDSFAEKLRINIEMKNGYIKLLGGEE HCCCCCCCCCCCCCCCCCCCCHHCCCCEEEHHHHHCCCCEEEEEEEEEECCEEEEECCCC LNFDEIYNEYMAFAERLRPYVKDTSVEIYNAIQADKNVLFEGAQGMLLDIDYGTYPYVTS CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHEEECCCCEEEEECCCCCCEEEC SNTTSCGVASGAGIGPNMVTNAVGIAKAYTTRVGKGPFPTELENETGDWIREKGHEYGVT CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCC TGRSRRCGWLDLVILKTTTRVCGLTSLVVTKIDTLAGLDKIQMCVGYELDGKVIDYFPAS CCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCEEECCCCC LEDLARCKPVYEEFEGWGEEVADARSYEELPENAKTYLRRIEEFTGTKVSIVGVGPKRNQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCEEEEEECCCCCCC TIRVREEL EEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11792842