| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
Click here to switch to the map view.
The map label for this gene is 18311601
Identifier: 18311601
GI number: 18311601
Start: 2995896
End: 2996087
Strand: Reverse
Name: 18311601
Synonym: CPE2619
Alternate gene names: NA
Gene position: 2996087-2995896 (Counterclockwise)
Preceding gene: 18311602
Following gene: 18311600
Centisome position: 98.83
GC content: 34.38
Gene sequence:
>192_bases ATGATAACTAAAGACATGACAATTGGAGAAGTAATAAGAAAAATGCCAACAGCTGCTGAGGTATTAATGAGCTTTGGTAT GGGATGTGTTGGATGCCCATCAGCTCAAGCTGAAACTTTAGAAGAGGCTGCAATAGTTCATGGAATAAACTTAGACGATT TAATAGAAGCTATAAATAACATAGAATATTAA
Upstream 100 bases:
>100_bases TAAAGATTATAATTCAGAGTGAAATACTTGTATTTGAAATTTATAGGGAGTATAATTAAGGATATAACTTTTAATTTAAT TAAGAGAGGTGTAGTTTATT
Downstream 100 bases:
>100_bases TTTTAATCTCTGTTTAAAATAAGAAGTGCTTTTTTAATAGGTACTTCTTATTTTTGTACTATTTATTTTAAAAGTTACCT ATAAAATTTAAATTATACAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 63; Mature: 63
Protein sequence:
>63_residues MITKDMTIGEVIRKMPTAAEVLMSFGMGCVGCPSAQAETLEEAAIVHGINLDDLIEAINNIEY
Sequences:
>Translated_63_residues MITKDMTIGEVIRKMPTAAEVLMSFGMGCVGCPSAQAETLEEAAIVHGINLDDLIEAINNIEY >Mature_63_residues MITKDMTIGEVIRKMPTAAEVLMSFGMGCVGCPSAQAETLEEAAIVHGINLDDLIEAINNIEY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6770; Mature: 6770
Theoretical pI: Translated: 3.92; Mature: 3.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 7.9 %Met (Translated Protein) 11.1 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 7.9 %Met (Mature Protein) 11.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITKDMTIGEVIRKMPTAAEVLMSFGMGCVGCPSAQAETLEEAAIVHGINLDDLIEAINN CCCCCCCHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH IEY CCC >Mature Secondary Structure MITKDMTIGEVIRKMPTAAEVLMSFGMGCVGCPSAQAETLEEAAIVHGINLDDLIEAINN CCCCCCCHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH IEY CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA