| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18311598
Identifier: 18311598
GI number: 18311598
Start: 2993418
End: 2994176
Strand: Reverse
Name: 18311598
Synonym: CPE2616
Alternate gene names: NA
Gene position: 2994176-2993418 (Counterclockwise)
Preceding gene: 18311599
Following gene: 18311596
Centisome position: 98.77
GC content: 27.67
Gene sequence:
>759_bases ATGAGCGAAAATAAATTTATGAAAAAATATGATGTACTATATTATGATTCAGATGTTAATGAAAACATAAGAATGGTTCC ACTTATGAAAATCTTTGGTGATGTATCTGCAATACATGAGGAAGAGTTAGCTTATGAAGGAATTAAGTATTTAAAAGATC ATGAATTAAGTTGGATTATTTATAGTTATTCAATAGATATAAAAAAGCCAATACCATATAAAAGTTCAATTAATGTGGAA ACTTATCTAGAAGGAATAAAGAAATTTTACGCTTGTAGAGTATATAAAGTTTATAATGAAAAAAATGAACTTGTGGCTGA AGGTAAGATTATTTTCTTATTAATAGATTTAGAGAAGCGTAGAGCTGTTAGAATTCCTAAAGAGTATTGTGAGTTAATAA ACATGAGTGATACTGGAGAAGTCGAGTTAAAATCAACTAAAGTTGAAAAATTAATTAGAGAAGATTTAGAATCAAATATT TCTGTAAGAAGAAGTGATATAGATTTTAATAAGCATGTTAATAACACTAAATACTTAGAATGGACTATGGAGGCTACTCC AGAGTGTATTTTAGATGAATATAGCCTTATATCAGCTAAAATAAAGTATGAGAAGGAAGTTAGACTTGGAGATGATGTAA ATATTATCTGCCAATGGGATGAGATTGAAGAAGGCTATAAGTGCCTTTATAAGATTGTAAACAACAGATTAGGAGAAGTT TCAGCTTCAATAGAAACAATTTGGAAAAAAGAGTTTTAA
Upstream 100 bases:
>100_bases GATGAAGTAAAGGTTCTTCATAAAGTAGAAAATGAAGAGGGAGAAAGCATTACTTTAGCAGAAACTTATTGGTATTAAAA TTTTTCTAGGAGAATTAATT
Downstream 100 bases:
>100_bases AAGTAATAAAACCCTCGGTATGGCTAGGAGGTTGTAGCCTAGTTATACCAAGGGTTTTGTATTATATAAAAATAAATTTT ACTTAATTAAAAAATATATT
Product: hypothetical protein
Products: NA
Alternate protein names: Acyl-Acyl Carrier Protein Thioesterase; Acyl-ACP Thioesterase Family Protein; Oleoyl-[Acyl-Carrier Protein] Thioesterase; Thioesterase Acyl-ACP Family; Oleoyl-Acyl Carrier Protein Thioesterase; Acyl-Acp Thioesterase; Acyl Carrier Protein Thioesterase-Like Protein; Acyl-ACP Thioesterase-Like
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MSENKFMKKYDVLYYDSDVNENIRMVPLMKIFGDVSAIHEEELAYEGIKYLKDHELSWIIYSYSIDIKKPIPYKSSINVE TYLEGIKKFYACRVYKVYNEKNELVAEGKIIFLLIDLEKRRAVRIPKEYCELINMSDTGEVELKSTKVEKLIREDLESNI SVRRSDIDFNKHVNNTKYLEWTMEATPECILDEYSLISAKIKYEKEVRLGDDVNIICQWDEIEEGYKCLYKIVNNRLGEV SASIETIWKKEF
Sequences:
>Translated_252_residues MSENKFMKKYDVLYYDSDVNENIRMVPLMKIFGDVSAIHEEELAYEGIKYLKDHELSWIIYSYSIDIKKPIPYKSSINVE TYLEGIKKFYACRVYKVYNEKNELVAEGKIIFLLIDLEKRRAVRIPKEYCELINMSDTGEVELKSTKVEKLIREDLESNI SVRRSDIDFNKHVNNTKYLEWTMEATPECILDEYSLISAKIKYEKEVRLGDDVNIICQWDEIEEGYKCLYKIVNNRLGEV SASIETIWKKEF >Mature_251_residues SENKFMKKYDVLYYDSDVNENIRMVPLMKIFGDVSAIHEEELAYEGIKYLKDHELSWIIYSYSIDIKKPIPYKSSINVET YLEGIKKFYACRVYKVYNEKNELVAEGKIIFLLIDLEKRRAVRIPKEYCELINMSDTGEVELKSTKVEKLIREDLESNIS VRRSDIDFNKHVNNTKYLEWTMEATPECILDEYSLISAKIKYEKEVRLGDDVNIICQWDEIEEGYKCLYKIVNNRLGEVS ASIETIWKKEF
Specific function: Unknown
COG id: COG3884
COG function: function code I; Acyl-ACP thioesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29848; Mature: 29716
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSENKFMKKYDVLYYDSDVNENIRMVPLMKIFGDVSAIHEEELAYEGIKYLKDHELSWII CCCCHHHHHEEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE YSYSIDIKKPIPYKSSINVETYLEGIKKFYACRVYKVYNEKNELVAEGKIIFLLIDLEKR EEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCEEECCEEEEEEEECCCC RAVRIPKEYCELINMSDTGEVELKSTKVEKLIREDLESNISVRRSDIDFNKHVNNTKYLE CCCCCCHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCEEEE WTMEATPECILDEYSLISAKIKYEKEVRLGDDVNIICQWDEIEEGYKCLYKIVNNRLGEV EEECCCCHHHHHHHHHHHEEEEEEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHH SASIETIWKKEF HHHHHHHHHCCC >Mature Secondary Structure SENKFMKKYDVLYYDSDVNENIRMVPLMKIFGDVSAIHEEELAYEGIKYLKDHELSWII CCCHHHHHEEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE YSYSIDIKKPIPYKSSINVETYLEGIKKFYACRVYKVYNEKNELVAEGKIIFLLIDLEKR EEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCEEECCEEEEEEEECCCC RAVRIPKEYCELINMSDTGEVELKSTKVEKLIREDLESNISVRRSDIDFNKHVNNTKYLE CCCCCCHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCEEEE WTMEATPECILDEYSLISAKIKYEKEVRLGDDVNIICQWDEIEEGYKCLYKIVNNRLGEV EEECCCCHHHHHHHHHHHEEEEEEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHH SASIETIWKKEF HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA